RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
RDX-201ENST00000343115 SLC4A1APQ9BWU0 796 aaKnown RBP22.57■■□□□ 1.2
RDX-201ENST00000343115 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
RDX-201ENST00000343115 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
RDX-201ENST00000343115 SUPT16HQ9Y5B9 1047 aaKnown RBP22.55■■□□□ 1.2
RDX-201ENST00000343115 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
RDX-201ENST00000343115 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
RDX-201ENST00000343115 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
RDX-201ENST00000343115 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
RDX-201ENST00000343115 MRS2Q9HD23 443 aa22.51■■□□□ 1.19
RDX-201ENST00000343115 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
RDX-201ENST00000343115 KDM2AQ9Y2K7 1162 aa22.49■■□□□ 1.19
RDX-201ENST00000343115 KCNH8Q96L42 1107 aa22.48■■□□□ 1.19
RDX-201ENST00000343115 EIF4G2P78344 907 aaKnown RBP eCLIP22.48■■□□□ 1.191e-35■■■■■ 36.1
RDX-201ENST00000343115 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
RDX-201ENST00000343115 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
RDX-201ENST00000343115 SETD5Q9C0A6 1442 aa22.43■■□□□ 1.18
RDX-201ENST00000343115 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
RDX-201ENST00000343115 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
RDX-201ENST00000343115 NCAPD3P42695 1498 aa22.4■■□□□ 1.18
RDX-201ENST00000343115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.186e-8■■■□□ 16.9
RDX-201ENST00000343115 FOXD1Q16676 465 aa22.37■■□□□ 1.17
RDX-201ENST00000343115 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
RDX-201ENST00000343115 TMC1Q8TDI8 760 aa22.33■■□□□ 1.17
RDX-201ENST00000343115 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.17
RDX-201ENST00000343115 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
RDX-201ENST00000343115 RTL5Q5HYW3 569 aaPredicted RBP22.31■■□□□ 1.16
RDX-201ENST00000343115 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
RDX-201ENST00000343115 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
RDX-201ENST00000343115 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
RDX-201ENST00000343115 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
RDX-201ENST00000343115 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
RDX-201ENST00000343115 KIF21BO75037 1637 aa22.27■■□□□ 1.16
RDX-201ENST00000343115 PPP1R15AO75807 674 aaPredicted RBP22.27■■□□□ 1.16
RDX-201ENST00000343115 NESP48681 1621 aa22.27■■□□□ 1.16
RDX-201ENST00000343115 CFDP1Q9UEE9 299 aaPredicted RBP22.26■■□□□ 1.15
RDX-201ENST00000343115 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
RDX-201ENST00000343115 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
RDX-201ENST00000343115 CCDC136Q96JN2 1154 aa22.22■■□□□ 1.15
RDX-201ENST00000343115 IGF1RP08069 1367 aa22.21■■□□□ 1.15
RDX-201ENST00000343115 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
RDX-201ENST00000343115 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.14
RDX-201ENST00000343115 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
RDX-201ENST00000343115 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
RDX-201ENST00000343115 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
RDX-201ENST00000343115 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
RDX-201ENST00000343115 ANP32AP39687 249 aaKnown RBP22.13■■□□□ 1.13
RDX-201ENST00000343115 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
RDX-201ENST00000343115 CCER2I3L3R5 266 aa22.1■■□□□ 1.13
RDX-201ENST00000343115 CHGAP10645 457 aaKnown RBP22.1■■□□□ 1.13
RDX-201ENST00000343115 CFTRP13569 1480 aa22.09■■□□□ 1.13
RDX-201ENST00000343115 PHLDB1Q86UU1 1377 aa22.08■■□□□ 1.13
RDX-201ENST00000343115 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
RDX-201ENST00000343115 CARD11Q9BXL7 1154 aa22.08■■□□□ 1.13
RDX-201ENST00000343115 TSHZ2Q9NRE2 1034 aa22.08■■□□□ 1.13
RDX-201ENST00000343115 NBR1Q14596 966 aa22.08■■□□□ 1.12
RDX-201ENST00000343115 MPHOSPH9Q99550 1183 aa22.08■■□□□ 1.12
RDX-201ENST00000343115 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
RDX-201ENST00000343115 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
RDX-201ENST00000343115 ANP32EQ9BTT0 268 aa22.04■■□□□ 1.12
RDX-201ENST00000343115 CANXP27824 592 aaKnown RBP22.02■■□□□ 1.12
RDX-201ENST00000343115 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
RDX-201ENST00000343115 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
RDX-201ENST00000343115 PRXQ9BXM0 1461 aa22■■□□□ 1.11
RDX-201ENST00000343115 RBM19Q9Y4C8 960 aaKnown RBP21.99■■□□□ 1.11
RDX-201ENST00000343115 HMGXB3Q12766 1538 aa21.98■■□□□ 1.11
RDX-201ENST00000343115 PKD2Q13563 968 aa21.97■■□□□ 1.11
RDX-201ENST00000343115 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
RDX-201ENST00000343115 CUX1P39880 1505 aa21.94■■□□□ 1.1
RDX-201ENST00000343115 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
RDX-201ENST00000343115 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.1
RDX-201ENST00000343115 LRRC9Q6ZRR7 1453 aa21.9■■□□□ 1.1
RDX-201ENST00000343115 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.1
RDX-201ENST00000343115 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
RDX-201ENST00000343115 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
RDX-201ENST00000343115 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
RDX-201ENST00000343115 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
RDX-201ENST00000343115 ERICH3Q5RHP9 1530 aa21.86■■□□□ 1.09
RDX-201ENST00000343115 CC2D1BQ5T0F9 858 aaKnown RBP21.86■■□□□ 1.09
RDX-201ENST00000343115 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
RDX-201ENST00000343115 PEG3Q9GZU2 1588 aa21.84■■□□□ 1.09
RDX-201ENST00000343115 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
RDX-201ENST00000343115 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
RDX-201ENST00000343115 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
RDX-201ENST00000343115 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
RDX-201ENST00000343115 NUP155O75694 1391 aa21.77■■□□□ 1.08
RDX-201ENST00000343115 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
RDX-201ENST00000343115 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
RDX-201ENST00000343115 HNRNPMP52272 730 aaKnown RBP eCLIP21.74■■□□□ 1.07
RDX-201ENST00000343115 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
RDX-201ENST00000343115 KNSTRNQ9Y448 316 aa21.72■■□□□ 1.07
RDX-201ENST00000343115 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
RDX-201ENST00000343115 NEUROD2Q15784 382 aa21.68■■□□□ 1.06
RDX-201ENST00000343115 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
RDX-201ENST00000343115 WASHC2AQ641Q2 1341 aa21.66■■□□□ 1.06
RDX-201ENST00000343115 CASKIN1Q8WXD9 1431 aa21.66■■□□□ 1.06
RDX-201ENST00000343115 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
RDX-201ENST00000343115 UACAQ9BZF9 1416 aa21.65■■□□□ 1.06
RDX-201ENST00000343115 ST20-MTHFSA0A0A6YYL1 179 aa21.64■■□□□ 1.06
RDX-201ENST00000343115 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms