RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 RIMBP3BA6NNM3 1639 aa36.42■■■■□ 3.42
RBM38-201ENST00000342690 RIMBP3Q9UFD9 1639 aa36.42■■■■□ 3.42
RBM38-201ENST00000342690 KIAA0586Q9BVV6 1533 aa36.4■■■■□ 3.42
RBM38-201ENST00000342690 SHROOM2Q13796 1616 aa36.4■■■■□ 3.42
RBM38-201ENST00000342690 KIF21BO75037 1637 aa36.32■■■■□ 3.4
RBM38-201ENST00000342690 IQGAP2Q13576 1575 aa36.28■■■■□ 3.4
RBM38-201ENST00000342690 CTTNBP2Q8WZ74 1663 aa36.28■■■■□ 3.4
RBM38-201ENST00000342690 JPH4Q96JJ6 628 aa36.26■■■■□ 3.4
RBM38-201ENST00000342690 ERCC6L2Q5T890 1561 aa36.25■■■■□ 3.39
RBM38-201ENST00000342690 PRG4Q92954 1404 aaPredicted RBP36.2■■■■□ 3.39
RBM38-201ENST00000342690 ARAP1Q96P48 1450 aa36.18■■■■□ 3.38
RBM38-201ENST00000342690 GOLGA3Q08378 1498 aa36.11■■■■□ 3.37
RBM38-201ENST00000342690 UGGT2Q9NYU1 1516 aa36.08■■■■□ 3.37
RBM38-201ENST00000342690 EHMT2Q96KQ7 1210 aa36.05■■■■□ 3.36
RBM38-201ENST00000342690 CYB5RLQ6IPT4 315 aa36.01■■■■□ 3.36
RBM38-201ENST00000342690 DISP1Q96F81 1524 aa36■■■■□ 3.35
RBM38-201ENST00000342690 CARMIL2Q6F5E8 1435 aa35.97■■■■□ 3.35
RBM38-201ENST00000342690 KIAA0556O60303 1618 aa35.95■■■■□ 3.35
RBM38-201ENST00000342690 UBTFP17480 764 aaKnown RBP35.92■■■■□ 3.34
RBM38-201ENST00000342690 TNIKQ9UKE5 1360 aa35.86■■■■□ 3.33
RBM38-201ENST00000342690 SAMD9Q5K651 1589 aa35.82■■■■□ 3.32
RBM38-201ENST00000342690 PTPRGP23470 1445 aa35.79■■■■□ 3.32
RBM38-201ENST00000342690 RANGAP1P46060 587 aaPredicted RBP35.76■■■■□ 3.32
RBM38-201ENST00000342690 TTBK1Q5TCY1 1321 aaPredicted RBP35.75■■■■□ 3.31
RBM38-201ENST00000342690 EFCAB5A4FU69 1503 aa35.7■■■■□ 3.31
RBM38-201ENST00000342690 P3H3Q8IVL6 736 aa35.69■■■■□ 3.3
RBM38-201ENST00000342690 ADCY10Q96PN6 1610 aa35.65■■■■□ 3.3
RBM38-201ENST00000342690 FHOD3Q2V2M9 1422 aa35.62■■■■□ 3.29
RBM38-201ENST00000342690 ARHGAP35Q9NRY4 1499 aa35.59■■■■□ 3.29
RBM38-201ENST00000342690 UACAQ9BZF9 1416 aa35.58■■■■□ 3.29
RBM38-201ENST00000342690 LOC105371045A0A1W2PR82 267 aa35.58■■■■□ 3.29
RBM38-201ENST00000342690 UHRF1BP1LA0JNW5 1464 aa35.54■■■■□ 3.28
RBM38-201ENST00000342690 ABCC2Q92887 1545 aa35.54■■■■□ 3.28
RBM38-201ENST00000342690 PLB1Q6P1J6 1458 aa35.54■■■■□ 3.28
RBM38-201ENST00000342690 ABCA8O94911 1581 aa35.53■■■■□ 3.28
RBM38-201ENST00000342690 CLIP1P30622 1438 aa35.46■■■■□ 3.27
RBM38-201ENST00000342690 RAPGEF6Q8TEU7 1601 aa35.4■■■■□ 3.26
RBM38-201ENST00000342690 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
RBM38-201ENST00000342690 CEP162Q5TB80 1403 aa35.39■■■■□ 3.26
RBM38-201ENST00000342690 KDM5BQ9UGL1 1544 aa35.37■■■■□ 3.25
RBM38-201ENST00000342690 ZCCHC11Q5TAX3 1644 aaKnown RBP35.35■■■■□ 3.25
RBM38-201ENST00000342690 MAPKBP1O60336 1514 aa35.33■■■■□ 3.25
RBM38-201ENST00000342690 FMN1Q68DA7 1419 aa35.32■■■■□ 3.25
RBM38-201ENST00000342690 NUP153P49790 1475 aaKnown RBP35.27■■■■□ 3.24
RBM38-201ENST00000342690 ATP10BO94823 1461 aa35.21■■■■□ 3.23
RBM38-201ENST00000342690 ARID3CA6NKF2 412 aa35.2■■■■□ 3.23
RBM38-201ENST00000342690 ASXL2Q76L83 1435 aa35.2■■■■□ 3.23
RBM38-201ENST00000342690 HECW1Q76N89 1606 aa35.18■■■■□ 3.22
RBM38-201ENST00000342690 PCF11O94913 1555 aaKnown RBP35.17■■■■□ 3.22
RBM38-201ENST00000342690 TRHP20396 242 aaPredicted RBP35.16■■■■□ 3.22
RBM38-201ENST00000342690 ABCC10Q5T3U5 1492 aa35.12■■■■□ 3.21
RBM38-201ENST00000342690 CASKIN1Q8WXD9 1431 aa35.11■■■■□ 3.21
RBM38-201ENST00000342690 DIP2BQ9P265 1576 aa35.11■■■■□ 3.21
RBM38-201ENST00000342690 KIF13AQ9H1H9 1805 aa35.11■■■■□ 3.21
RBM38-201ENST00000342690 WDR7Q9Y4E6 1490 aa35.08■■■■□ 3.21
RBM38-201ENST00000342690 CDK13Q14004 1512 aaKnown RBP35.07■■■■□ 3.21
RBM38-201ENST00000342690 ATP1B4Q9UN42 357 aaPredicted RBP35.07■■■■□ 3.2
RBM38-201ENST00000342690 LRRIQ1Q96JM4 1722 aa35.06■■■■□ 3.2
RBM38-201ENST00000342690 FYCO1Q9BQS8 1478 aa35.06■■■■□ 3.2
RBM38-201ENST00000342690 EPRSP07814 1512 aaKnown RBP35.06■■■■□ 3.2
RBM38-201ENST00000342690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.03■■■■□ 3.2
RBM38-201ENST00000342690 HNRNPUL2Q1KMD3 747 aaKnown RBP35.03■■■■□ 3.2
RBM38-201ENST00000342690 FAM69CQ0P6D2 419 aa34.99■■■■□ 3.19
RBM38-201ENST00000342690 GLI2P10070 1586 aa34.96■■■■□ 3.19
RBM38-201ENST00000342690 VPS8Q8N3P4 1428 aa34.94■■■■□ 3.18
RBM38-201ENST00000342690 CCDC18Q5T9S5 1454 aa34.93■■■■□ 3.18
RBM38-201ENST00000342690 KCNH8Q96L42 1107 aa34.88■■■■□ 3.17
RBM38-201ENST00000342690 PLEKHD1A6NEE1 506 aa34.87■■■■□ 3.17
RBM38-201ENST00000342690 MAP3K4Q9Y6R4 1608 aa34.84■■■■□ 3.17
RBM38-201ENST00000342690 TSPOAP1O95153 1857 aa34.79■■■■□ 3.16
RBM38-201ENST00000342690 CFAP43Q8NDM7 1665 aa34.79■■■■□ 3.16
RBM38-201ENST00000342690 CDK11AQ9UQ88 783 aaPredicted RBP34.78■■■■□ 3.16
RBM38-201ENST00000342690 ABCA9Q8IUA7 1624 aa34.77■■■■□ 3.16
RBM38-201ENST00000342690 MAGI3Q5TCQ9 1506 aa34.76■■■■□ 3.16
RBM38-201ENST00000342690 TROQ12816 1431 aaPredicted RBP34.76■■■■□ 3.16
RBM38-201ENST00000342690 PPRC1Q5VV67 1664 aaKnown RBP34.76■■■■□ 3.15
RBM38-201ENST00000342690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.71■■■■□ 3.153e-6■■□□□ 13.3
RBM38-201ENST00000342690 CD109Q6YHK3 1445 aa34.7■■■■□ 3.15
RBM38-201ENST00000342690 KIF14Q15058 1648 aa34.7■■■■□ 3.14
RBM38-201ENST00000342690 TIAM1Q13009 1591 aa34.67■■■■□ 3.14
RBM38-201ENST00000342690 TTC37Q6PGP7 1564 aa34.67■■■■□ 3.14
RBM38-201ENST00000342690 TEX14Q8IWB6 1497 aa34.59■■■■□ 3.13
RBM38-201ENST00000342690 MAP3K1Q13233 1512 aa34.59■■■■□ 3.13
RBM38-201ENST00000342690 EHBP1L1Q8N3D4 1523 aa34.59■■■■□ 3.13
RBM38-201ENST00000342690 MTUS2Q5JR59 1369 aa34.59■■■■□ 3.13
RBM38-201ENST00000342690 MYO5CQ9NQX4 1742 aa34.51■■■■□ 3.12
RBM38-201ENST00000342690 LRRC9Q6ZRR7 1453 aa34.49■■■■□ 3.11
RBM38-201ENST00000342690 PLCH2O75038 1416 aa34.46■■■■□ 3.11
RBM38-201ENST00000342690 APLP2Q06481 763 aa34.44■■■■□ 3.1
RBM38-201ENST00000342690 KDM6BO15054 1643 aa34.44■■■■□ 3.1
RBM38-201ENST00000342690 KANK4Q5T7N3 995 aaPredicted RBP34.43■■■■□ 3.1
RBM38-201ENST00000342690 SUPT6HQ7KZ85 1726 aaKnown RBP34.42■■■■□ 3.1
RBM38-201ENST00000342690 ARAP3Q8WWN8 1544 aa34.42■■■■□ 3.1
RBM38-201ENST00000342690 NEO1Q92859 1461 aa34.42■■■■□ 3.1
RBM38-201ENST00000342690 CDC42BPAQ5VT25 1732 aa34.41■■■■□ 3.1
RBM38-201ENST00000342690 PREX2Q70Z35 1606 aa34.41■■■■□ 3.1
RBM38-201ENST00000342690 CFAP74Q9C0B2 1584 aa34.4■■■■□ 3.1
RBM38-201ENST00000342690 FANCAO15360 1455 aa34.4■■■■□ 3.1
RBM38-201ENST00000342690 CDC42BPBQ9Y5S2 1711 aa34.39■■■■□ 3.1
RBM38-201ENST00000342690 COL17A1Q9UMD9 1497 aaPredicted RBP34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms