RNA–Protein interactions for RNA: ENST00000341369.11

PTMA-201, Transcript of prothymosin alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTMA, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-201ENST00000341369 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
PTMA-201ENST00000341369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.551e-12■■■■□ 24.5
PTMA-201ENST00000341369 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
PTMA-201ENST00000341369 POTEHQ6S545 545 aa18.47■□□□□ 0.55
PTMA-201ENST00000341369 CUX1P39880 1505 aa18.42■□□□□ 0.54
PTMA-201ENST00000341369 PBRM1Q86U86 1689 aa18.36■□□□□ 0.53
PTMA-201ENST00000341369 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
PTMA-201ENST00000341369 ABCA10Q8WWZ4 1543 aa18.3■□□□□ 0.52
PTMA-201ENST00000341369 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
PTMA-201ENST00000341369 GRIN2AQ12879 1464 aa18.27■□□□□ 0.52
PTMA-201ENST00000341369 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
PTMA-201ENST00000341369 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
PTMA-201ENST00000341369 NUP160Q12769 1436 aa18.22■□□□□ 0.51
PTMA-201ENST00000341369 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
PTMA-201ENST00000341369 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
PTMA-201ENST00000341369 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
PTMA-201ENST00000341369 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
PTMA-201ENST00000341369 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
PTMA-201ENST00000341369 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
PTMA-201ENST00000341369 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.493e-14■□□□□ 9
PTMA-201ENST00000341369 FAM69CQ0P6D2 419 aa18.08■□□□□ 0.48
PTMA-201ENST00000341369 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
PTMA-201ENST00000341369 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.48
PTMA-201ENST00000341369 DSG3P32926 999 aa18.07■□□□□ 0.48
PTMA-201ENST00000341369 ABCC10Q5T3U5 1492 aa18.05■□□□□ 0.48
PTMA-201ENST00000341369 TOP2BQ02880 1626 aa18.03■□□□□ 0.48
PTMA-201ENST00000341369 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
PTMA-201ENST00000341369 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
PTMA-201ENST00000341369 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
PTMA-201ENST00000341369 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
PTMA-201ENST00000341369 CAPN15O75808 1086 aa17.99■□□□□ 0.47
PTMA-201ENST00000341369 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
PTMA-201ENST00000341369 DIP2BQ9P265 1576 aa17.96■□□□□ 0.46
PTMA-201ENST00000341369 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
PTMA-201ENST00000341369 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
PTMA-201ENST00000341369 KDM6BO15054 1643 aa17.94■□□□□ 0.46
PTMA-201ENST00000341369 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
PTMA-201ENST00000341369 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
PTMA-201ENST00000341369 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
PTMA-201ENST00000341369 KIAA0586Q9BVV6 1533 aa17.84■□□□□ 0.45
PTMA-201ENST00000341369 TSPOAP1O95153 1857 aa17.83■□□□□ 0.44
PTMA-201ENST00000341369 PTPRGP23470 1445 aa17.79■□□□□ 0.44
PTMA-201ENST00000341369 IGF1RP08069 1367 aa17.75■□□□□ 0.43
PTMA-201ENST00000341369 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
PTMA-201ENST00000341369 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
PTMA-201ENST00000341369 PLB1Q6P1J6 1458 aa17.73■□□□□ 0.43
PTMA-201ENST00000341369 CUL7Q14999 1698 aa17.73■□□□□ 0.43
PTMA-201ENST00000341369 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
PTMA-201ENST00000341369 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
PTMA-201ENST00000341369 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.43
PTMA-201ENST00000341369 ASXL2Q76L83 1435 aa17.71■□□□□ 0.43
PTMA-201ENST00000341369 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
PTMA-201ENST00000341369 GLI2P10070 1586 aa17.7■□□□□ 0.42
PTMA-201ENST00000341369 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.41
PTMA-201ENST00000341369 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
PTMA-201ENST00000341369 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
PTMA-201ENST00000341369 UACAQ9BZF9 1416 aa17.62■□□□□ 0.41
PTMA-201ENST00000341369 TEX14Q8IWB6 1497 aa17.62■□□□□ 0.41
PTMA-201ENST00000341369 IQGAP2Q13576 1575 aa17.59■□□□□ 0.41
PTMA-201ENST00000341369 HECW2Q9P2P5 1572 aa17.58■□□□□ 0.41
PTMA-201ENST00000341369 EPRSP07814 1512 aaKnown RBP17.58■□□□□ 0.41
PTMA-201ENST00000341369 COL17A1Q9UMD9 1497 aaPredicted RBP17.58■□□□□ 0.41
PTMA-201ENST00000341369 MAP3K4Q9Y6R4 1608 aa17.56■□□□□ 0.4
PTMA-201ENST00000341369 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
PTMA-201ENST00000341369 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
PTMA-201ENST00000341369 APLP2Q06481 763 aa17.52■□□□□ 0.4
PTMA-201ENST00000341369 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
PTMA-201ENST00000341369 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
PTMA-201ENST00000341369 ABCB7O75027 752 aa17.47■□□□□ 0.39
PTMA-201ENST00000341369 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
PTMA-201ENST00000341369 WDR7Q9Y4E6 1490 aa17.46■□□□□ 0.39
PTMA-201ENST00000341369 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
PTMA-201ENST00000341369 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
PTMA-201ENST00000341369 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
PTMA-201ENST00000341369 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
PTMA-201ENST00000341369 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
PTMA-201ENST00000341369 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
PTMA-201ENST00000341369 CFAP43Q8NDM7 1665 aa17.38■□□□□ 0.37
PTMA-201ENST00000341369 SLC4A2P04920 1241 aa17.37■□□□□ 0.37
PTMA-201ENST00000341369 GOLGA3Q08378 1498 aa17.34■□□□□ 0.37
PTMA-201ENST00000341369 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
PTMA-201ENST00000341369 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
PTMA-201ENST00000341369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
PTMA-201ENST00000341369 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
PTMA-201ENST00000341369 KIF21BO75037 1637 aa17.31■□□□□ 0.36
PTMA-201ENST00000341369 ABCA8O94911 1581 aa17.29■□□□□ 0.36
PTMA-201ENST00000341369 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
PTMA-201ENST00000341369 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.35
PTMA-201ENST00000341369 PTPRMP28827 1452 aa17.25■□□□□ 0.35
PTMA-201ENST00000341369 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
PTMA-201ENST00000341369 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
PTMA-201ENST00000341369 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
PTMA-201ENST00000341369 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
PTMA-201ENST00000341369 ARID3CA6NKF2 412 aa17.17■□□□□ 0.34
PTMA-201ENST00000341369 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
PTMA-201ENST00000341369 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
PTMA-201ENST00000341369 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
PTMA-201ENST00000341369 ATP10BO94823 1461 aa17.16■□□□□ 0.34
PTMA-201ENST00000341369 NEO1Q92859 1461 aa17.16■□□□□ 0.34
PTMA-201ENST00000341369 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms