RNA–Protein interactions for RNA: ENST00000340273.4

MMP13-202, Transcript of matrix metallopeptidase 13, humanhuman

TSL 1 (best) BASIC

Gene MMP13, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13-202ENST00000340273 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
MMP13-202ENST00000340273 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
MMP13-202ENST00000340273 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
MMP13-202ENST00000340273 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
MMP13-202ENST00000340273 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
MMP13-202ENST00000340273 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
MMP13-202ENST00000340273 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
MMP13-202ENST00000340273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.08□□□□□ -0.32
MMP13-202ENST00000340273 CLIP1P30622 1438 aa13.07□□□□□ -0.32
MMP13-202ENST00000340273 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
MMP13-202ENST00000340273 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
MMP13-202ENST00000340273 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
MMP13-202ENST00000340273 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
MMP13-202ENST00000340273 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
MMP13-202ENST00000340273 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
MMP13-202ENST00000340273 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
MMP13-202ENST00000340273 CUL7Q14999 1698 aa13□□□□□ -0.33
MMP13-202ENST00000340273 ADAMTS12P58397 1594 aa13□□□□□ -0.33
MMP13-202ENST00000340273 PRXQ9BXM0 1461 aa13□□□□□ -0.33
MMP13-202ENST00000340273 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
MMP13-202ENST00000340273 OSCARQ8IYS5 282 aa13□□□□□ -0.33
MMP13-202ENST00000340273 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
MMP13-202ENST00000340273 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
MMP13-202ENST00000340273 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
MMP13-202ENST00000340273 P3H3Q8IVL6 736 aa12.96□□□□□ -0.34
MMP13-202ENST00000340273 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
MMP13-202ENST00000340273 CHD1O14646 1710 aa12.94□□□□□ -0.34
MMP13-202ENST00000340273 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
MMP13-202ENST00000340273 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
MMP13-202ENST00000340273 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
MMP13-202ENST00000340273 KIAA0586Q9BVV6 1533 aa12.85□□□□□ -0.35
MMP13-202ENST00000340273 NUP160Q12769 1436 aa12.85□□□□□ -0.35
MMP13-202ENST00000340273 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
MMP13-202ENST00000340273 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
MMP13-202ENST00000340273 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
MMP13-202ENST00000340273 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
MMP13-202ENST00000340273 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
MMP13-202ENST00000340273 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
MMP13-202ENST00000340273 APLP2Q06481 763 aa12.8□□□□□ -0.36
MMP13-202ENST00000340273 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
MMP13-202ENST00000340273 CARMIL2Q6F5E8 1435 aa12.79□□□□□ -0.36
MMP13-202ENST00000340273 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.37
MMP13-202ENST00000340273 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
MMP13-202ENST00000340273 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
MMP13-202ENST00000340273 CLASP1Q7Z460 1538 aa12.76□□□□□ -0.37
MMP13-202ENST00000340273 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
MMP13-202ENST00000340273 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
MMP13-202ENST00000340273 CFAP43Q8NDM7 1665 aa12.74□□□□□ -0.37
MMP13-202ENST00000340273 MAP3K1Q13233 1512 aa12.73□□□□□ -0.37
MMP13-202ENST00000340273 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
MMP13-202ENST00000340273 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
MMP13-202ENST00000340273 PTPRGP23470 1445 aa12.72□□□□□ -0.37
MMP13-202ENST00000340273 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.37
MMP13-202ENST00000340273 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.38
MMP13-202ENST00000340273 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
MMP13-202ENST00000340273 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
MMP13-202ENST00000340273 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
MMP13-202ENST00000340273 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
MMP13-202ENST00000340273 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
MMP13-202ENST00000340273 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
MMP13-202ENST00000340273 KIAA0556O60303 1618 aa12.67□□□□□ -0.38
MMP13-202ENST00000340273 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
MMP13-202ENST00000340273 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
MMP13-202ENST00000340273 PCF11O94913 1555 aaKnown RBP12.66□□□□□ -0.38
MMP13-202ENST00000340273 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
MMP13-202ENST00000340273 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
MMP13-202ENST00000340273 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
MMP13-202ENST00000340273 CCNB3Q8WWL7 1395 aa12.64□□□□□ -0.39
MMP13-202ENST00000340273 SAMD9Q5K651 1589 aa12.63□□□□□ -0.39
MMP13-202ENST00000340273 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
MMP13-202ENST00000340273 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
MMP13-202ENST00000340273 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
MMP13-202ENST00000340273 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
MMP13-202ENST00000340273 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
MMP13-202ENST00000340273 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
MMP13-202ENST00000340273 PLB1Q6P1J6 1458 aa12.6□□□□□ -0.39
MMP13-202ENST00000340273 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
MMP13-202ENST00000340273 UACAQ9BZF9 1416 aa12.58□□□□□ -0.4
MMP13-202ENST00000340273 FYCO1Q9BQS8 1478 aa12.57□□□□□ -0.4
MMP13-202ENST00000340273 MAPKBP1O60336 1514 aa12.56□□□□□ -0.4
MMP13-202ENST00000340273 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
MMP13-202ENST00000340273 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
MMP13-202ENST00000340273 DCAF8L1A6NGE4 600 aa12.54□□□□□ -0.4
MMP13-202ENST00000340273 MIER1Q8N108 512 aa12.54□□□□□ -0.4
MMP13-202ENST00000340273 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
MMP13-202ENST00000340273 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
MMP13-202ENST00000340273 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
MMP13-202ENST00000340273 PLEKHD1A6NEE1 506 aa12.53□□□□□ -0.4
MMP13-202ENST00000340273 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.4
MMP13-202ENST00000340273 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.41
MMP13-202ENST00000340273 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
MMP13-202ENST00000340273 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
MMP13-202ENST00000340273 ABCA8O94911 1581 aa12.5□□□□□ -0.41
MMP13-202ENST00000340273 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
MMP13-202ENST00000340273 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
MMP13-202ENST00000340273 SETD5Q9C0A6 1442 aa12.49□□□□□ -0.41
MMP13-202ENST00000340273 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
MMP13-202ENST00000340273 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
MMP13-202ENST00000340273 ATP10BO94823 1461 aa12.48□□□□□ -0.41
MMP13-202ENST00000340273 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms