RNA–Protein interactions for RNA: ENST00000337132.9

NECAP2-201, Transcript of NECAP endocytosis associated 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAP2, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-201ENST00000337132 MAP3K1Q13233 1512 aa22.49■■□□□ 1.19
NECAP2-201ENST00000337132 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
NECAP2-201ENST00000337132 ERCC6Q03468 1493 aa22.47■■□□□ 1.19
NECAP2-201ENST00000337132 ITGAEP38570 1179 aa22.45■■□□□ 1.18
NECAP2-201ENST00000337132 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
NECAP2-201ENST00000337132 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
NECAP2-201ENST00000337132 MAPKBP1O60336 1514 aa22.43■■□□□ 1.18
NECAP2-201ENST00000337132 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
NECAP2-201ENST00000337132 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
NECAP2-201ENST00000337132 TOPBP1Q92547 1522 aa22.39■■□□□ 1.17
NECAP2-201ENST00000337132 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
NECAP2-201ENST00000337132 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
NECAP2-201ENST00000337132 NEFLP07196 543 aa22.36■■□□□ 1.17
NECAP2-201ENST00000337132 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
NECAP2-201ENST00000337132 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
NECAP2-201ENST00000337132 FKBP8Q14318 412 aa22.34■■□□□ 1.17
NECAP2-201ENST00000337132 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
NECAP2-201ENST00000337132 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
NECAP2-201ENST00000337132 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
NECAP2-201ENST00000337132 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
NECAP2-201ENST00000337132 WDR62O43379 1518 aa22.3■■□□□ 1.16
NECAP2-201ENST00000337132 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
NECAP2-201ENST00000337132 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
NECAP2-201ENST00000337132 PPP1R15AO75807 674 aaPredicted RBP22.27■■□□□ 1.16
NECAP2-201ENST00000337132 ANP32CO43423 234 aa22.26■■□□□ 1.15
NECAP2-201ENST00000337132 BCANQ96GW7 911 aa22.26■■□□□ 1.15
NECAP2-201ENST00000337132 IGF1RP08069 1367 aa22.25■■□□□ 1.15
NECAP2-201ENST00000337132 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
NECAP2-201ENST00000337132 FAM50AQ14320 339 aaKnown RBP22.23■■□□□ 1.15
NECAP2-201ENST00000337132 SIN3AQ96ST3 1273 aa22.22■■□□□ 1.15
NECAP2-201ENST00000337132 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
NECAP2-201ENST00000337132 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
NECAP2-201ENST00000337132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.18■■□□□ 1.14
NECAP2-201ENST00000337132 CFAP43Q8NDM7 1665 aa22.17■■□□□ 1.14
NECAP2-201ENST00000337132 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
NECAP2-201ENST00000337132 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
NECAP2-201ENST00000337132 TARBP1Q13395 1621 aaKnown RBP22.1■■□□□ 1.13
NECAP2-201ENST00000337132 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
NECAP2-201ENST00000337132 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
NECAP2-201ENST00000337132 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
NECAP2-201ENST00000337132 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
NECAP2-201ENST00000337132 FYCO1Q9BQS8 1478 aa22.06■■□□□ 1.12
NECAP2-201ENST00000337132 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
NECAP2-201ENST00000337132 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.123e-7■■■■□ 19.8
NECAP2-201ENST00000337132 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
NECAP2-201ENST00000337132 EFCAB5A4FU69 1503 aa22.02■■□□□ 1.12
NECAP2-201ENST00000337132 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
NECAP2-201ENST00000337132 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
NECAP2-201ENST00000337132 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
NECAP2-201ENST00000337132 BCL11AQ9H165 835 aa21.98■■□□□ 1.11
NECAP2-201ENST00000337132 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
NECAP2-201ENST00000337132 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
NECAP2-201ENST00000337132 P3H3Q8IVL6 736 aa21.95■■□□□ 1.11
NECAP2-201ENST00000337132 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
NECAP2-201ENST00000337132 CCDC18Q5T9S5 1454 aa21.94■■□□□ 1.1
NECAP2-201ENST00000337132 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
NECAP2-201ENST00000337132 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
NECAP2-201ENST00000337132 CDK11AQ9UQ88 783 aaPredicted RBP21.93■■□□□ 1.1
NECAP2-201ENST00000337132 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
NECAP2-201ENST00000337132 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
NECAP2-201ENST00000337132 FHOD3Q2V2M9 1422 aa21.92■■□□□ 1.1
NECAP2-201ENST00000337132 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
NECAP2-201ENST00000337132 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
NECAP2-201ENST00000337132 PBRM1Q86U86 1689 aa21.9■■□□□ 1.1
NECAP2-201ENST00000337132 FANCIQ9NVI1 1328 aa21.9■■□□□ 1.1
NECAP2-201ENST00000337132 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
NECAP2-201ENST00000337132 PTPN23Q9H3S7 1636 aa21.85■■□□□ 1.09
NECAP2-201ENST00000337132 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
NECAP2-201ENST00000337132 CUL7Q14999 1698 aa21.83■■□□□ 1.08
NECAP2-201ENST00000337132 ERICH6Q7L0X2 663 aa21.83■■□□□ 1.08
NECAP2-201ENST00000337132 CTTNBP2Q8WZ74 1663 aa21.81■■□□□ 1.08
NECAP2-201ENST00000337132 GRIN2BQ13224 1484 aa21.8■■□□□ 1.08
NECAP2-201ENST00000337132 NAIPQ13075 1403 aa21.79■■□□□ 1.08
NECAP2-201ENST00000337132 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.07
NECAP2-201ENST00000337132 MSH5O43196 834 aa21.76■■□□□ 1.07
NECAP2-201ENST00000337132 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
NECAP2-201ENST00000337132 PPP4R2Q9NY27 417 aa21.76■■□□□ 1.07
NECAP2-201ENST00000337132 MYT1LQ9UL68 1186 aa21.76■■□□□ 1.07
NECAP2-201ENST00000337132 PTPRKQ15262 1439 aa21.75■■□□□ 1.07
NECAP2-201ENST00000337132 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
NECAP2-201ENST00000337132 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
NECAP2-201ENST00000337132 ADAMTS12P58397 1594 aa21.72■■□□□ 1.07
NECAP2-201ENST00000337132 KDM5BQ9UGL1 1544 aa21.72■■□□□ 1.07
NECAP2-201ENST00000337132 HSPA5P11021 654 aaKnown RBP21.71■■□□□ 1.07
NECAP2-201ENST00000337132 SUPT6HQ7KZ85 1726 aaKnown RBP21.71■■□□□ 1.07
NECAP2-201ENST00000337132 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
NECAP2-201ENST00000337132 EHBP1L1Q8N3D4 1523 aa21.69■■□□□ 1.06
NECAP2-201ENST00000337132 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
NECAP2-201ENST00000337132 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
NECAP2-201ENST00000337132 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
NECAP2-201ENST00000337132 SAMD9Q5K651 1589 aa21.65■■□□□ 1.06
NECAP2-201ENST00000337132 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
NECAP2-201ENST00000337132 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
NECAP2-201ENST00000337132 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
NECAP2-201ENST00000337132 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
NECAP2-201ENST00000337132 ZBED9Q6R2W3 1325 aa21.6■■□□□ 1.05
NECAP2-201ENST00000337132 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
NECAP2-201ENST00000337132 PRKRIP1Q9H875 184 aaPredicted RBP21.59■■□□□ 1.05
NECAP2-201ENST00000337132 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
NECAP2-201ENST00000337132 ARHGEF11O15085 1522 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms