RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
NLRP3-201ENST00000336119 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
NLRP3-201ENST00000336119 IGF1RP08069 1367 aa13.11□□□□□ -0.31
NLRP3-201ENST00000336119 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
NLRP3-201ENST00000336119 ANP32CO43423 234 aa13.09□□□□□ -0.31
NLRP3-201ENST00000336119 TONSLQ96HA7 1378 aa13.09□□□□□ -0.31
NLRP3-201ENST00000336119 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
NLRP3-201ENST00000336119 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
NLRP3-201ENST00000336119 CUX1P39880 1505 aa13.07□□□□□ -0.32
NLRP3-201ENST00000336119 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
NLRP3-201ENST00000336119 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
NLRP3-201ENST00000336119 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.33
NLRP3-201ENST00000336119 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
NLRP3-201ENST00000336119 POLR3GLQ9BT43 218 aa13.01□□□□□ -0.33
NLRP3-201ENST00000336119 OSCARQ8IYS5 282 aa13□□□□□ -0.33
NLRP3-201ENST00000336119 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
NLRP3-201ENST00000336119 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
NLRP3-201ENST00000336119 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
NLRP3-201ENST00000336119 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
NLRP3-201ENST00000336119 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
NLRP3-201ENST00000336119 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
NLRP3-201ENST00000336119 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
NLRP3-201ENST00000336119 RRP7BPQ9NSQ0 103 aa12.97□□□□□ -0.33
NLRP3-201ENST00000336119 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
NLRP3-201ENST00000336119 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
NLRP3-201ENST00000336119 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.34
NLRP3-201ENST00000336119 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
NLRP3-201ENST00000336119 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
NLRP3-201ENST00000336119 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
NLRP3-201ENST00000336119 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
NLRP3-201ENST00000336119 ZNF326Q5BKZ1 582 aaKnown RBP12.91□□□□□ -0.34
NLRP3-201ENST00000336119 URB2Q14146 1524 aaKnown RBP12.9□□□□□ -0.34
NLRP3-201ENST00000336119 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
NLRP3-201ENST00000336119 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
NLRP3-201ENST00000336119 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
NLRP3-201ENST00000336119 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
NLRP3-201ENST00000336119 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
NLRP3-201ENST00000336119 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
NLRP3-201ENST00000336119 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
NLRP3-201ENST00000336119 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
NLRP3-201ENST00000336119 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
NLRP3-201ENST00000336119 MYT1Q01538 1121 aa12.86□□□□□ -0.35
NLRP3-201ENST00000336119 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
NLRP3-201ENST00000336119 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
NLRP3-201ENST00000336119 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
NLRP3-201ENST00000336119 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
NLRP3-201ENST00000336119 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
NLRP3-201ENST00000336119 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NLRP3-201ENST00000336119 PHLDB1Q86UU1 1377 aa12.83□□□□□ -0.36
NLRP3-201ENST00000336119 CASKIN1Q8WXD9 1431 aa12.83□□□□□ -0.36
NLRP3-201ENST00000336119 BCANQ96GW7 911 aa12.82□□□□□ -0.36
NLRP3-201ENST00000336119 ABCA10Q8WWZ4 1543 aa12.81□□□□□ -0.36
NLRP3-201ENST00000336119 PPP1R15AO75807 674 aaPredicted RBP12.81□□□□□ -0.36
NLRP3-201ENST00000336119 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
NLRP3-201ENST00000336119 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
NLRP3-201ENST00000336119 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
NLRP3-201ENST00000336119 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
NLRP3-201ENST00000336119 WDR62O43379 1518 aa12.79□□□□□ -0.36
NLRP3-201ENST00000336119 CYB5RLQ6IPT4 315 aa12.79□□□□□ -0.36
NLRP3-201ENST00000336119 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
NLRP3-201ENST00000336119 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.36
NLRP3-201ENST00000336119 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
NLRP3-201ENST00000336119 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
NLRP3-201ENST00000336119 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
NLRP3-201ENST00000336119 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
NLRP3-201ENST00000336119 FKBP8Q14318 412 aa12.75□□□□□ -0.37
NLRP3-201ENST00000336119 CARMIL2Q6F5E8 1435 aa12.75□□□□□ -0.37
NLRP3-201ENST00000336119 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
NLRP3-201ENST00000336119 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
NLRP3-201ENST00000336119 MYOM3Q5VTT5 1437 aa12.72□□□□□ -0.37
NLRP3-201ENST00000336119 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
NLRP3-201ENST00000336119 SNAPC4Q5SXM2 1469 aa12.72□□□□□ -0.37
NLRP3-201ENST00000336119 CCER2I3L3R5 266 aa12.71□□□□□ -0.38
NLRP3-201ENST00000336119 CUL7Q14999 1698 aa12.7□□□□□ -0.38
NLRP3-201ENST00000336119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
NLRP3-201ENST00000336119 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
NLRP3-201ENST00000336119 THOC2Q8NI27 1593 aaKnown RBP12.68□□□□□ -0.38
NLRP3-201ENST00000336119 NCOA2Q15596 1464 aa12.68□□□□□ -0.38
NLRP3-201ENST00000336119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
NLRP3-201ENST00000336119 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
NLRP3-201ENST00000336119 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
NLRP3-201ENST00000336119 HSPA5P11021 654 aaKnown RBP12.66□□□□□ -0.38
NLRP3-201ENST00000336119 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
NLRP3-201ENST00000336119 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
NLRP3-201ENST00000336119 FOXD1Q16676 465 aa12.64□□□□□ -0.39
NLRP3-201ENST00000336119 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
NLRP3-201ENST00000336119 MAGI1Q96QZ7 1491 aaPredicted RBP12.63□□□□□ -0.39
NLRP3-201ENST00000336119 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
NLRP3-201ENST00000336119 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
NLRP3-201ENST00000336119 ANKRD30AQ9BXX3 1397 aa12.62□□□□□ -0.39
NLRP3-201ENST00000336119 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
NLRP3-201ENST00000336119 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
NLRP3-201ENST00000336119 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
NLRP3-201ENST00000336119 EHBP1L1Q8N3D4 1523 aa12.61□□□□□ -0.39
NLRP3-201ENST00000336119 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
NLRP3-201ENST00000336119 PKD2Q13563 968 aa12.6□□□□□ -0.39
NLRP3-201ENST00000336119 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
NLRP3-201ENST00000336119 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
NLRP3-201ENST00000336119 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
NLRP3-201ENST00000336119 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms