RNA–Protein interactions for RNA: ENST00000335960.10

SEZ6-202, Transcript of seizure related 6 homolog, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEZ6, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEZ6-202ENST00000335960 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
SEZ6-202ENST00000335960 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
SEZ6-202ENST00000335960 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.54
SEZ6-202ENST00000335960 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
SEZ6-202ENST00000335960 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.53
SEZ6-202ENST00000335960 FHAD1B1AJZ9 1412 aa18.33■□□□□ 0.52
SEZ6-202ENST00000335960 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.52
SEZ6-202ENST00000335960 NPM1P06748 294 aaKnown RBP eCLIP18.32■□□□□ 0.52
SEZ6-202ENST00000335960 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
SEZ6-202ENST00000335960 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SEZ6-202ENST00000335960 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
SEZ6-202ENST00000335960 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
SEZ6-202ENST00000335960 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
SEZ6-202ENST00000335960 FHOD3Q2V2M9 1422 aa18.24■□□□□ 0.51
SEZ6-202ENST00000335960 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
SEZ6-202ENST00000335960 RGL3Q3MIN7 710 aa18.23■□□□□ 0.51
SEZ6-202ENST00000335960 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
SEZ6-202ENST00000335960 IGF1RP08069 1367 aa18.21■□□□□ 0.5
SEZ6-202ENST00000335960 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
SEZ6-202ENST00000335960 FKBP8Q14318 412 aa18.2■□□□□ 0.5
SEZ6-202ENST00000335960 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
SEZ6-202ENST00000335960 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
SEZ6-202ENST00000335960 FOXD1Q16676 465 aa18.16■□□□□ 0.5
SEZ6-202ENST00000335960 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
SEZ6-202ENST00000335960 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
SEZ6-202ENST00000335960 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
SEZ6-202ENST00000335960 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
SEZ6-202ENST00000335960 FGD5Q6ZNL6 1462 aa18.13■□□□□ 0.49
SEZ6-202ENST00000335960 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
SEZ6-202ENST00000335960 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
SEZ6-202ENST00000335960 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
SEZ6-202ENST00000335960 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
SEZ6-202ENST00000335960 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
SEZ6-202ENST00000335960 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
SEZ6-202ENST00000335960 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
SEZ6-202ENST00000335960 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.49
SEZ6-202ENST00000335960 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
SEZ6-202ENST00000335960 IRX6P78412 446 aaPredicted RBP18.05■□□□□ 0.48
SEZ6-202ENST00000335960 NESP48681 1621 aa18.04■□□□□ 0.48
SEZ6-202ENST00000335960 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
SEZ6-202ENST00000335960 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
SEZ6-202ENST00000335960 CFTRP13569 1480 aa18.03■□□□□ 0.48
SEZ6-202ENST00000335960 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
SEZ6-202ENST00000335960 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
SEZ6-202ENST00000335960 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
SEZ6-202ENST00000335960 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
SEZ6-202ENST00000335960 KIF21BO75037 1637 aa17.96■□□□□ 0.47
SEZ6-202ENST00000335960 PKD2Q13563 968 aa17.95■□□□□ 0.46
SEZ6-202ENST00000335960 GAPVD1Q14C86 1478 aa17.94■□□□□ 0.46
SEZ6-202ENST00000335960 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
SEZ6-202ENST00000335960 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
SEZ6-202ENST00000335960 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
SEZ6-202ENST00000335960 PPP1R15AO75807 674 aaPredicted RBP17.93■□□□□ 0.46
SEZ6-202ENST00000335960 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
SEZ6-202ENST00000335960 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
SEZ6-202ENST00000335960 BCL11AQ9H165 835 aa17.92■□□□□ 0.46
SEZ6-202ENST00000335960 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
SEZ6-202ENST00000335960 CUX1P39880 1505 aa17.9■□□□□ 0.46
SEZ6-202ENST00000335960 HSPA5P11021 654 aaKnown RBP17.9■□□□□ 0.46
SEZ6-202ENST00000335960 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.45
SEZ6-202ENST00000335960 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
SEZ6-202ENST00000335960 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
SEZ6-202ENST00000335960 L3MBTL2Q969R5 705 aa17.87■□□□□ 0.45
SEZ6-202ENST00000335960 PHLDB1Q86UU1 1377 aa17.86■□□□□ 0.45
SEZ6-202ENST00000335960 NUP155O75694 1391 aa17.83■□□□□ 0.45
SEZ6-202ENST00000335960 HMGXB3Q12766 1538 aa17.83■□□□□ 0.44
SEZ6-202ENST00000335960 ZNF644Q9H582 1327 aaPredicted RBP17.83■□□□□ 0.44
SEZ6-202ENST00000335960 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
SEZ6-202ENST00000335960 SLC24A1O60721 1099 aa17.82■□□□□ 0.44
SEZ6-202ENST00000335960 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
SEZ6-202ENST00000335960 WDR43Q15061 677 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEZ6-202ENST00000335960 NEFMP07197 916 aa17.8■□□□□ 0.44
SEZ6-202ENST00000335960 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
SEZ6-202ENST00000335960 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.44
SEZ6-202ENST00000335960 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.43
SEZ6-202ENST00000335960 GGT6Q6P531 493 aa17.76■□□□□ 0.43
SEZ6-202ENST00000335960 EFCAB2Q5VUJ9 269 aa17.76■□□□□ 0.43
SEZ6-202ENST00000335960 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
SEZ6-202ENST00000335960 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
SEZ6-202ENST00000335960 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
SEZ6-202ENST00000335960 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
SEZ6-202ENST00000335960 CC2D1BQ5T0F9 858 aaKnown RBP17.74■□□□□ 0.43
SEZ6-202ENST00000335960 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
SEZ6-202ENST00000335960 LRRC9Q6ZRR7 1453 aa17.73■□□□□ 0.43
SEZ6-202ENST00000335960 MYT1Q01538 1121 aa17.72■□□□□ 0.43
SEZ6-202ENST00000335960 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
SEZ6-202ENST00000335960 PTPRGP23470 1445 aa17.71■□□□□ 0.43
SEZ6-202ENST00000335960 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
SEZ6-202ENST00000335960 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
SEZ6-202ENST00000335960 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
SEZ6-202ENST00000335960 MLECQ14165 292 aa17.68■□□□□ 0.42
SEZ6-202ENST00000335960 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
SEZ6-202ENST00000335960 KIF3BO15066 747 aa17.67■□□□□ 0.42
SEZ6-202ENST00000335960 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
SEZ6-202ENST00000335960 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
SEZ6-202ENST00000335960 CCER2I3L3R5 266 aa17.64■□□□□ 0.41
SEZ6-202ENST00000335960 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
SEZ6-202ENST00000335960 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
SEZ6-202ENST00000335960 MYOM3Q5VTT5 1437 aa17.62■□□□□ 0.41
SEZ6-202ENST00000335960 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms