RNA–Protein interactions for RNA: ENST00000333942.10

RHOT1-201, Transcript of ras homolog family member T1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RHOT1, Length 3,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-201ENST00000333942 CUX2O14529 1486 aa24.49■■□□□ 1.51
RHOT1-201ENST00000333942 IGF1RP08069 1367 aa24.43■■□□□ 1.5
RHOT1-201ENST00000333942 SETD5Q9C0A6 1442 aa24.42■■□□□ 1.5
RHOT1-201ENST00000333942 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
RHOT1-201ENST00000333942 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
RHOT1-201ENST00000333942 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
RHOT1-201ENST00000333942 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
RHOT1-201ENST00000333942 NEFLP07196 543 aa24.34■■□□□ 1.49
RHOT1-201ENST00000333942 CFTRP13569 1480 aa24.34■■□□□ 1.49
RHOT1-201ENST00000333942 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
RHOT1-201ENST00000333942 ANP32CO43423 234 aa24.31■■□□□ 1.48
RHOT1-201ENST00000333942 LRRC9Q6ZRR7 1453 aa24.29■■□□□ 1.48
RHOT1-201ENST00000333942 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
RHOT1-201ENST00000333942 RBM19Q9Y4C8 960 aaKnown RBP24.26■■□□□ 1.47
RHOT1-201ENST00000333942 PPP1R15AO75807 674 aaPredicted RBP24.26■■□□□ 1.47
RHOT1-201ENST00000333942 IRX6P78412 446 aaPredicted RBP24.25■■□□□ 1.47
RHOT1-201ENST00000333942 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
RHOT1-201ENST00000333942 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
RHOT1-201ENST00000333942 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.46
RHOT1-201ENST00000333942 TONSLQ96HA7 1378 aa24.19■■□□□ 1.46
RHOT1-201ENST00000333942 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
RHOT1-201ENST00000333942 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
RHOT1-201ENST00000333942 CHIC2Q9UKJ5 165 aa24.1■■□□□ 1.45
RHOT1-201ENST00000333942 HNRNPUQ00839 825 aaKnown RBP eCLIP24.1■■□□□ 1.45
RHOT1-201ENST00000333942 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
RHOT1-201ENST00000333942 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
RHOT1-201ENST00000333942 MSH5O43196 834 aa24.07■■□□□ 1.44
RHOT1-201ENST00000333942 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
RHOT1-201ENST00000333942 PCF11O94913 1555 aaKnown RBP24.07■■□□□ 1.44
RHOT1-201ENST00000333942 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
RHOT1-201ENST00000333942 RRP7BPQ9NSQ0 103 aa24.05■■□□□ 1.44
RHOT1-201ENST00000333942 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
RHOT1-201ENST00000333942 MAP3K1Q13233 1512 aa24.01■■□□□ 1.43
RHOT1-201ENST00000333942 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
RHOT1-201ENST00000333942 ERICH6Q7L0X2 663 aa23.97■■□□□ 1.43
RHOT1-201ENST00000333942 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
RHOT1-201ENST00000333942 CCDC18Q5T9S5 1454 aa23.94■■□□□ 1.42
RHOT1-201ENST00000333942 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
RHOT1-201ENST00000333942 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
RHOT1-201ENST00000333942 FOXD1Q16676 465 aa23.91■■□□□ 1.42
RHOT1-201ENST00000333942 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
RHOT1-201ENST00000333942 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.42
RHOT1-201ENST00000333942 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
RHOT1-201ENST00000333942 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
RHOT1-201ENST00000333942 FYCO1Q9BQS8 1478 aa23.86■■□□□ 1.41
RHOT1-201ENST00000333942 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
RHOT1-201ENST00000333942 NESP48681 1621 aa23.83■■□□□ 1.41
RHOT1-201ENST00000333942 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
RHOT1-201ENST00000333942 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.42e-6■■□□□ 13.5
RHOT1-201ENST00000333942 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
RHOT1-201ENST00000333942 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
RHOT1-201ENST00000333942 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
RHOT1-201ENST00000333942 WASHC2AQ641Q2 1341 aa23.82■■□□□ 1.4
RHOT1-201ENST00000333942 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
RHOT1-201ENST00000333942 POLR3GLQ9BT43 218 aa23.79■■□□□ 1.4
RHOT1-201ENST00000333942 CDK11AQ9UQ88 783 aaPredicted RBP23.79■■□□□ 1.4
RHOT1-201ENST00000333942 NAIPQ13075 1403 aa23.79■■□□□ 1.4
RHOT1-201ENST00000333942 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
RHOT1-201ENST00000333942 EIF4G2P78344 907 aaKnown RBP eCLIP23.78■■□□□ 1.4
RHOT1-201ENST00000333942 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
RHOT1-201ENST00000333942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.39
RHOT1-201ENST00000333942 NBR1Q14596 966 aa23.75■■□□□ 1.39
RHOT1-201ENST00000333942 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
RHOT1-201ENST00000333942 L3MBTL2Q969R5 705 aa23.74■■□□□ 1.39
RHOT1-201ENST00000333942 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
RHOT1-201ENST00000333942 MYOM3Q5VTT5 1437 aa23.72■■□□□ 1.39
RHOT1-201ENST00000333942 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
RHOT1-201ENST00000333942 PRDM2Q13029 1718 aa23.71■■□□□ 1.39
RHOT1-201ENST00000333942 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
RHOT1-201ENST00000333942 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
RHOT1-201ENST00000333942 B4GALNT3Q6L9W6 998 aa23.69■■□□□ 1.38
RHOT1-201ENST00000333942 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
RHOT1-201ENST00000333942 MPHOSPH9Q99550 1183 aa23.69■■□□□ 1.38
RHOT1-201ENST00000333942 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
RHOT1-201ENST00000333942 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
RHOT1-201ENST00000333942 CC2D2AQ9P2K1 1620 aa23.66■■□□□ 1.38
RHOT1-201ENST00000333942 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
RHOT1-201ENST00000333942 PRKRIP1Q9H875 184 aaPredicted RBP23.61■■□□□ 1.37
RHOT1-201ENST00000333942 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
RHOT1-201ENST00000333942 DEKP35659 375 aaKnown RBP23.59■■□□□ 1.37
RHOT1-201ENST00000333942 NBPF8Q3BBV2 869 aa23.58■■□□□ 1.37
RHOT1-201ENST00000333942 SLC4A1APQ9BWU0 796 aaKnown RBP23.57■■□□□ 1.36
RHOT1-201ENST00000333942 PPP4R2Q9NY27 417 aa23.56■■□□□ 1.36
RHOT1-201ENST00000333942 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
RHOT1-201ENST00000333942 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
RHOT1-201ENST00000333942 ZNF644Q9H582 1327 aaPredicted RBP23.54■■□□□ 1.36
RHOT1-201ENST00000333942 KDM5BQ9UGL1 1544 aa23.52■■□□□ 1.36
RHOT1-201ENST00000333942 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
RHOT1-201ENST00000333942 CUL7Q14999 1698 aa23.52■■□□□ 1.36
RHOT1-201ENST00000333942 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
RHOT1-201ENST00000333942 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
RHOT1-201ENST00000333942 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
RHOT1-201ENST00000333942 MAGI3Q5TCQ9 1506 aa23.5■■□□□ 1.35
RHOT1-201ENST00000333942 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
RHOT1-201ENST00000333942 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
RHOT1-201ENST00000333942 KDM6BO15054 1643 aa23.47■■□□□ 1.35
RHOT1-201ENST00000333942 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
RHOT1-201ENST00000333942 DENND4BO75064 1496 aaPredicted RBP23.47■■□□□ 1.35
RHOT1-201ENST00000333942 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
RHOT1-201ENST00000333942 KIF7Q2M1P5 1343 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms