RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 IRX6P78412 446 aaPredicted RBP25.15■■□□□ 1.62
TNFAIP2-201ENST00000333007 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
TNFAIP2-201ENST00000333007 SETD5Q9C0A6 1442 aa25.08■■□□□ 1.61
TNFAIP2-201ENST00000333007 KCNH8Q96L42 1107 aa25.05■■□□□ 1.6
TNFAIP2-201ENST00000333007 KIF21BO75037 1637 aa25.05■■□□□ 1.6
TNFAIP2-201ENST00000333007 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
TNFAIP2-201ENST00000333007 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
TNFAIP2-201ENST00000333007 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
TNFAIP2-201ENST00000333007 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
TNFAIP2-201ENST00000333007 RTL5Q5HYW3 569 aaPredicted RBP24.96■■□□□ 1.59
TNFAIP2-201ENST00000333007 DAXXQ9UER7 740 aaPredicted RBP24.9■■□□□ 1.58
TNFAIP2-201ENST00000333007 SLC4A1APQ9BWU0 796 aaKnown RBP24.89■■□□□ 1.57
TNFAIP2-201ENST00000333007 FHOD3Q2V2M9 1422 aa24.87■■□□□ 1.57
TNFAIP2-201ENST00000333007 SENP3-EIF4A1A0A087X0R7 540 aa24.87■■□□□ 1.57
TNFAIP2-201ENST00000333007 TIMELESSQ9UNS1 1208 aa24.87■■□□□ 1.57
TNFAIP2-201ENST00000333007 ARHGAP35Q9NRY4 1499 aa24.87■■□□□ 1.57
TNFAIP2-201ENST00000333007 PPP1R15AO75807 674 aaPredicted RBP24.86■■□□□ 1.57
TNFAIP2-201ENST00000333007 ARAP1Q96P48 1450 aa24.86■■□□□ 1.57
TNFAIP2-201ENST00000333007 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
TNFAIP2-201ENST00000333007 IGF1RP08069 1367 aa24.82■■□□□ 1.56
TNFAIP2-201ENST00000333007 SALL2Q9Y467 1007 aaPredicted RBP24.81■■□□□ 1.56
TNFAIP2-201ENST00000333007 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
TNFAIP2-201ENST00000333007 KDM2AQ9Y2K7 1162 aa24.79■■□□□ 1.56
TNFAIP2-201ENST00000333007 TSHZ2Q9NRE2 1034 aa24.77■■□□□ 1.56
TNFAIP2-201ENST00000333007 FOXD1Q16676 465 aa24.76■■□□□ 1.55
TNFAIP2-201ENST00000333007 CCER2I3L3R5 266 aa24.75■■□□□ 1.55
TNFAIP2-201ENST00000333007 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
TNFAIP2-201ENST00000333007 ANP32EQ9BTT0 268 aa24.74■■□□□ 1.55
TNFAIP2-201ENST00000333007 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
TNFAIP2-201ENST00000333007 TMC1Q8TDI8 760 aa24.73■■□□□ 1.55
TNFAIP2-201ENST00000333007 HSPA5P11021 654 aaKnown RBP24.71■■□□□ 1.55
TNFAIP2-201ENST00000333007 NBR1Q14596 966 aa24.71■■□□□ 1.55
TNFAIP2-201ENST00000333007 PHLDB1Q86UU1 1377 aa24.7■■□□□ 1.54
TNFAIP2-201ENST00000333007 NPM2Q86SE8 214 aaKnown RBP24.7■■□□□ 1.54
TNFAIP2-201ENST00000333007 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
TNFAIP2-201ENST00000333007 CCDC136Q96JN2 1154 aa24.66■■□□□ 1.54
TNFAIP2-201ENST00000333007 TOP2BQ02880 1626 aa24.66■■□□□ 1.54
TNFAIP2-201ENST00000333007 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
TNFAIP2-201ENST00000333007 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
TNFAIP2-201ENST00000333007 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
TNFAIP2-201ENST00000333007 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
TNFAIP2-201ENST00000333007 RRBP1Q9P2E9 1410 aaKnown RBP24.65■■□□□ 1.54
TNFAIP2-201ENST00000333007 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.53
TNFAIP2-201ENST00000333007 FGD5Q6ZNL6 1462 aa24.63■■□□□ 1.53
TNFAIP2-201ENST00000333007 TSPY4P0CV99 314 aa24.63■■□□□ 1.53
TNFAIP2-201ENST00000333007 TSPY10P0CW01 314 aa24.63■■□□□ 1.53
TNFAIP2-201ENST00000333007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.53
TNFAIP2-201ENST00000333007 ANP32AP39687 249 aaKnown RBP24.61■■□□□ 1.53
TNFAIP2-201ENST00000333007 RBM19Q9Y4C8 960 aaKnown RBP24.6■■□□□ 1.53
TNFAIP2-201ENST00000333007 CUX1P39880 1505 aa24.59■■□□□ 1.53
TNFAIP2-201ENST00000333007 LRRC9Q6ZRR7 1453 aa24.56■■□□□ 1.52
TNFAIP2-201ENST00000333007 MPHOSPH9Q99550 1183 aa24.56■■□□□ 1.52
TNFAIP2-201ENST00000333007 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
TNFAIP2-201ENST00000333007 B4GALNT3Q6L9W6 998 aa24.55■■□□□ 1.52
TNFAIP2-201ENST00000333007 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
TNFAIP2-201ENST00000333007 CFTRP13569 1480 aa24.54■■□□□ 1.52
TNFAIP2-201ENST00000333007 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
TNFAIP2-201ENST00000333007 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
TNFAIP2-201ENST00000333007 PPP4R2Q9NY27 417 aa24.49■■□□□ 1.51
TNFAIP2-201ENST00000333007 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
TNFAIP2-201ENST00000333007 PLEKHD1A6NEE1 506 aa24.48■■□□□ 1.51
TNFAIP2-201ENST00000333007 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
TNFAIP2-201ENST00000333007 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.5
TNFAIP2-201ENST00000333007 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
TNFAIP2-201ENST00000333007 BCL11AQ9H165 835 aa24.42■■□□□ 1.5
TNFAIP2-201ENST00000333007 FGD6Q6ZV73 1430 aa24.4■■□□□ 1.5
TNFAIP2-201ENST00000333007 PKD2Q13563 968 aa24.36■■□□□ 1.49
TNFAIP2-201ENST00000333007 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
TNFAIP2-201ENST00000333007 EIF5BO60841 1220 aaKnown RBP24.34■■□□□ 1.49
TNFAIP2-201ENST00000333007 ZBTB47Q9UFB7 747 aaPredicted RBP24.34■■□□□ 1.49
TNFAIP2-201ENST00000333007 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
TNFAIP2-201ENST00000333007 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
TNFAIP2-201ENST00000333007 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
TNFAIP2-201ENST00000333007 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
TNFAIP2-201ENST00000333007 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
TNFAIP2-201ENST00000333007 CANXP27824 592 aaKnown RBP24.28■■□□□ 1.48
TNFAIP2-201ENST00000333007 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
TNFAIP2-201ENST00000333007 PRKRIP1Q9H875 184 aaPredicted RBP24.25■■□□□ 1.47
TNFAIP2-201ENST00000333007 MYOM3Q5VTT5 1437 aa24.24■■□□□ 1.47
TNFAIP2-201ENST00000333007 CHGAP10645 457 aaKnown RBP24.22■■□□□ 1.47
TNFAIP2-201ENST00000333007 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
TNFAIP2-201ENST00000333007 WDR43Q15061 677 aaKnown RBP eCLIP24.21■■□□□ 1.47
TNFAIP2-201ENST00000333007 NESP48681 1621 aa24.2■■□□□ 1.47
TNFAIP2-201ENST00000333007 WASHC2AQ641Q2 1341 aa24.2■■□□□ 1.46
TNFAIP2-201ENST00000333007 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
TNFAIP2-201ENST00000333007 NCOA2Q15596 1464 aa24.2■■□□□ 1.46
TNFAIP2-201ENST00000333007 FYCO1Q9BQS8 1478 aa24.19■■□□□ 1.46
TNFAIP2-201ENST00000333007 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
TNFAIP2-201ENST00000333007 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
TNFAIP2-201ENST00000333007 NUP155O75694 1391 aa24.16■■□□□ 1.46
TNFAIP2-201ENST00000333007 RTN4Q9NQC3 1192 aaKnown RBP24.15■■□□□ 1.46
TNFAIP2-201ENST00000333007 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
TNFAIP2-201ENST00000333007 ERICH6BQ5W0A0 696 aa24.12■■□□□ 1.45
TNFAIP2-201ENST00000333007 NOP58Q9Y2X3 529 aaKnown RBP24.1■■□□□ 1.45
TNFAIP2-201ENST00000333007 ARXQ96QS3 562 aa24.08■■□□□ 1.45
TNFAIP2-201ENST00000333007 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.45
TNFAIP2-201ENST00000333007 ERCC6Q03468 1493 aa24.08■■□□□ 1.44
TNFAIP2-201ENST00000333007 TOPBP1Q92547 1522 aa24.08■■□□□ 1.44
TNFAIP2-201ENST00000333007 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
TNFAIP2-201ENST00000333007 ANKRD30AQ9BXX3 1397 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms