RNA–Protein interactions for RNA: ENST00000332914.10

LMO3-203, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-203ENST00000332914 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
LMO3-203ENST00000332914 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
LMO3-203ENST00000332914 CHD1O14646 1710 aa19.3■□□□□ 0.68
LMO3-203ENST00000332914 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
LMO3-203ENST00000332914 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
LMO3-203ENST00000332914 ABCB7O75027 752 aa19.24■□□□□ 0.67
LMO3-203ENST00000332914 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.67
LMO3-203ENST00000332914 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
LMO3-203ENST00000332914 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
LMO3-203ENST00000332914 FBLN2P98095 1184 aa19.15■□□□□ 0.66
LMO3-203ENST00000332914 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
LMO3-203ENST00000332914 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
LMO3-203ENST00000332914 CUX1P39880 1505 aa19.12■□□□□ 0.65
LMO3-203ENST00000332914 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
LMO3-203ENST00000332914 SOGA1O94964 1423 aa19.1■□□□□ 0.65
LMO3-203ENST00000332914 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
LMO3-203ENST00000332914 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
LMO3-203ENST00000332914 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
LMO3-203ENST00000332914 CLASP1Q7Z460 1538 aa19.03■□□□□ 0.64
LMO3-203ENST00000332914 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
LMO3-203ENST00000332914 POLA2Q14181 598 aa18.97■□□□□ 0.63
LMO3-203ENST00000332914 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
LMO3-203ENST00000332914 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
LMO3-203ENST00000332914 GAPVD1Q14C86 1478 aa18.91■□□□□ 0.62
LMO3-203ENST00000332914 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
LMO3-203ENST00000332914 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
LMO3-203ENST00000332914 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
LMO3-203ENST00000332914 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
LMO3-203ENST00000332914 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
LMO3-203ENST00000332914 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
LMO3-203ENST00000332914 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
LMO3-203ENST00000332914 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
LMO3-203ENST00000332914 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
LMO3-203ENST00000332914 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
LMO3-203ENST00000332914 EHMT2Q96KQ7 1210 aa18.82■□□□□ 0.6
LMO3-203ENST00000332914 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
LMO3-203ENST00000332914 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
LMO3-203ENST00000332914 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
LMO3-203ENST00000332914 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
LMO3-203ENST00000332914 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
LMO3-203ENST00000332914 CEP170Q5SW79 1584 aa18.7■□□□□ 0.58
LMO3-203ENST00000332914 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
LMO3-203ENST00000332914 KDM6BO15054 1643 aa18.61■□□□□ 0.57
LMO3-203ENST00000332914 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
LMO3-203ENST00000332914 NUP160Q12769 1436 aa18.61■□□□□ 0.57
LMO3-203ENST00000332914 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
LMO3-203ENST00000332914 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
LMO3-203ENST00000332914 ZBTB12Q9Y330 459 aaPredicted RBP18.58■□□□□ 0.56
LMO3-203ENST00000332914 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
LMO3-203ENST00000332914 FAM69CQ0P6D2 419 aa18.56■□□□□ 0.56
LMO3-203ENST00000332914 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
LMO3-203ENST00000332914 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.56
LMO3-203ENST00000332914 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
LMO3-203ENST00000332914 LMTK3Q96Q04 1460 aa18.51■□□□□ 0.55
LMO3-203ENST00000332914 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
LMO3-203ENST00000332914 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
LMO3-203ENST00000332914 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
LMO3-203ENST00000332914 TSPOAP1O95153 1857 aa18.42■□□□□ 0.54
LMO3-203ENST00000332914 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
LMO3-203ENST00000332914 MAPKBP1O60336 1514 aa18.39■□□□□ 0.53
LMO3-203ENST00000332914 CUL7Q14999 1698 aa18.38■□□□□ 0.53
LMO3-203ENST00000332914 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
LMO3-203ENST00000332914 IGF1RP08069 1367 aa18.37■□□□□ 0.53
LMO3-203ENST00000332914 SOCS7O14512 581 aa18.36■□□□□ 0.53
LMO3-203ENST00000332914 ILDR2Q71H61 639 aa18.32■□□□□ 0.52
LMO3-203ENST00000332914 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
LMO3-203ENST00000332914 TTBK1Q5TCY1 1321 aaPredicted RBP18.3■□□□□ 0.52
LMO3-203ENST00000332914 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
LMO3-203ENST00000332914 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
LMO3-203ENST00000332914 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.51
LMO3-203ENST00000332914 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
LMO3-203ENST00000332914 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
LMO3-203ENST00000332914 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
LMO3-203ENST00000332914 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
LMO3-203ENST00000332914 PPRC1Q5VV67 1664 aaKnown RBP18.15■□□□□ 0.5
LMO3-203ENST00000332914 PTPRGP23470 1445 aa18.15■□□□□ 0.5
LMO3-203ENST00000332914 COL17A1Q9UMD9 1497 aaPredicted RBP18.12■□□□□ 0.49
LMO3-203ENST00000332914 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
LMO3-203ENST00000332914 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
LMO3-203ENST00000332914 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
LMO3-203ENST00000332914 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
LMO3-203ENST00000332914 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.48
LMO3-203ENST00000332914 KIAA0556O60303 1618 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 POTEHQ6S545 545 aa18.05■□□□□ 0.48
LMO3-203ENST00000332914 UGGT2Q9NYU1 1516 aa18.03■□□□□ 0.48
LMO3-203ENST00000332914 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
LMO3-203ENST00000332914 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
LMO3-203ENST00000332914 REM2Q8IYK8 340 aaPredicted RBP18.01■□□□□ 0.47
LMO3-203ENST00000332914 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
LMO3-203ENST00000332914 GLI2P10070 1586 aa18■□□□□ 0.47
LMO3-203ENST00000332914 CHRDL2Q6WN34 429 aa17.99■□□□□ 0.47
LMO3-203ENST00000332914 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
LMO3-203ENST00000332914 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
LMO3-203ENST00000332914 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
LMO3-203ENST00000332914 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
LMO3-203ENST00000332914 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms