RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 PHLDB1Q86UU1 1377 aa26.83■■□□□ 1.89
LYSMD4-201ENST00000332728 DHX57Q6P158 1386 aaKnown RBP26.83■■□□□ 1.88
LYSMD4-201ENST00000332728 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
LYSMD4-201ENST00000332728 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
LYSMD4-201ENST00000332728 SCAF1Q9H7N4 1312 aaKnown RBP26.79■■□□□ 1.88
LYSMD4-201ENST00000332728 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
LYSMD4-201ENST00000332728 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
LYSMD4-201ENST00000332728 PCF11O94913 1555 aaKnown RBP26.77■■□□□ 1.88
LYSMD4-201ENST00000332728 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
LYSMD4-201ENST00000332728 TIAM1Q13009 1591 aa26.75■■□□□ 1.87
LYSMD4-201ENST00000332728 NEUROD1Q13562 356 aa26.74■■□□□ 1.87
LYSMD4-201ENST00000332728 LRRC9Q6ZRR7 1453 aa26.73■■□□□ 1.87
LYSMD4-201ENST00000332728 MIER1Q8N108 512 aa26.72■■□□□ 1.87
LYSMD4-201ENST00000332728 RAB3GAP2Q9H2M9 1393 aa26.69■■□□□ 1.86
LYSMD4-201ENST00000332728 FHAD1B1AJZ9 1412 aa26.68■■□□□ 1.86
LYSMD4-201ENST00000332728 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
LYSMD4-201ENST00000332728 FBLN2P98095 1184 aa26.61■■□□□ 1.85
LYSMD4-201ENST00000332728 MTUS2Q5JR59 1369 aa26.59■■□□□ 1.85
LYSMD4-201ENST00000332728 CUL7Q14999 1698 aa26.57■■□□□ 1.84
LYSMD4-201ENST00000332728 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
LYSMD4-201ENST00000332728 ABCA5Q8WWZ7 1642 aa26.55■■□□□ 1.84
LYSMD4-201ENST00000332728 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
LYSMD4-201ENST00000332728 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
LYSMD4-201ENST00000332728 CHIC2Q9UKJ5 165 aa26.53■■□□□ 1.84
LYSMD4-201ENST00000332728 CTTNBP2Q8WZ74 1663 aa26.53■■□□□ 1.84
LYSMD4-201ENST00000332728 CASKIN1Q8WXD9 1431 aa26.51■■□□□ 1.84
LYSMD4-201ENST00000332728 HIRIP3Q9BW71 556 aaPredicted RBP26.51■■□□□ 1.83
LYSMD4-201ENST00000332728 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
LYSMD4-201ENST00000332728 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
LYSMD4-201ENST00000332728 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
LYSMD4-201ENST00000332728 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
LYSMD4-201ENST00000332728 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
LYSMD4-201ENST00000332728 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
LYSMD4-201ENST00000332728 EFCAB5A4FU69 1503 aa26.43■■□□□ 1.82
LYSMD4-201ENST00000332728 GTF3C3Q9Y5Q9 886 aa26.43■■□□□ 1.82
LYSMD4-201ENST00000332728 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
LYSMD4-201ENST00000332728 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
LYSMD4-201ENST00000332728 CFAP43Q8NDM7 1665 aa26.4■■□□□ 1.82
LYSMD4-201ENST00000332728 CENPBP07199 599 aaPredicted RBP26.4■■□□□ 1.82
LYSMD4-201ENST00000332728 MAP3K1Q13233 1512 aa26.39■■□□□ 1.82
LYSMD4-201ENST00000332728 CLSPNQ9HAW4 1339 aa26.36■■□□□ 1.81
LYSMD4-201ENST00000332728 FGD6Q6ZV73 1430 aa26.34■■□□□ 1.81
LYSMD4-201ENST00000332728 MAPKBP1O60336 1514 aa26.34■■□□□ 1.81
LYSMD4-201ENST00000332728 PTPRKQ15262 1439 aa26.34■■□□□ 1.81
LYSMD4-201ENST00000332728 LRRIQ1Q96JM4 1722 aa26.32■■□□□ 1.8
LYSMD4-201ENST00000332728 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
LYSMD4-201ENST00000332728 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
LYSMD4-201ENST00000332728 NCOA2Q15596 1464 aa26.3■■□□□ 1.8
LYSMD4-201ENST00000332728 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
LYSMD4-201ENST00000332728 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
LYSMD4-201ENST00000332728 SAMD9Q5K651 1589 aa26.28■■□□□ 1.8
LYSMD4-201ENST00000332728 MAGI3Q5TCQ9 1506 aa26.26■■□□□ 1.79
LYSMD4-201ENST00000332728 TRIM52Q96A61 297 aa26.24■■□□□ 1.79
LYSMD4-201ENST00000332728 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
LYSMD4-201ENST00000332728 IQGAP2Q13576 1575 aa26.22■■□□□ 1.79
LYSMD4-201ENST00000332728 ZNF644Q9H582 1327 aaPredicted RBP26.2■■□□□ 1.78
LYSMD4-201ENST00000332728 FOXD1Q16676 465 aa26.2■■□□□ 1.78
LYSMD4-201ENST00000332728 KCNH8Q96L42 1107 aa26.19■■□□□ 1.78
LYSMD4-201ENST00000332728 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
LYSMD4-201ENST00000332728 MYOM3Q5VTT5 1437 aa26.18■■□□□ 1.78
LYSMD4-201ENST00000332728 DDX10Q13206 875 aaKnown RBP26.18■■□□□ 1.78
LYSMD4-201ENST00000332728 ZNF777Q9ULD5 760 aaPredicted RBP26.16■■□□□ 1.78
LYSMD4-201ENST00000332728 CCDC18Q5T9S5 1454 aa26.13■■□□□ 1.77
LYSMD4-201ENST00000332728 EPRSP07814 1512 aaKnown RBP26.12■■□□□ 1.77
LYSMD4-201ENST00000332728 EIF4G3O43432 1585 aaKnown RBP26.1■■□□□ 1.77
LYSMD4-201ENST00000332728 WDR62O43379 1518 aa26.1■■□□□ 1.77
LYSMD4-201ENST00000332728 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
LYSMD4-201ENST00000332728 SUPT6HQ7KZ85 1726 aaKnown RBP26.06■■□□□ 1.76
LYSMD4-201ENST00000332728 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
LYSMD4-201ENST00000332728 NAIPQ13075 1403 aa26.05■■□□□ 1.76
LYSMD4-201ENST00000332728 EHBP1L1Q8N3D4 1523 aa26.04■■□□□ 1.76
LYSMD4-201ENST00000332728 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
LYSMD4-201ENST00000332728 PTPN23Q9H3S7 1636 aa26.03■■□□□ 1.76
LYSMD4-201ENST00000332728 DISP1Q96F81 1524 aa26.02■■□□□ 1.76
LYSMD4-201ENST00000332728 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
LYSMD4-201ENST00000332728 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
LYSMD4-201ENST00000332728 UGGT2Q9NYU1 1516 aa26.01■■□□□ 1.75
LYSMD4-201ENST00000332728 PLB1Q6P1J6 1458 aa26■■□□□ 1.75
LYSMD4-201ENST00000332728 HECW1Q76N89 1606 aa26■■□□□ 1.75
LYSMD4-201ENST00000332728 KIAA0586Q9BVV6 1533 aa25.99■■□□□ 1.75
LYSMD4-201ENST00000332728 HFM1A2PYH4 1435 aa25.99■■□□□ 1.75
LYSMD4-201ENST00000332728 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
LYSMD4-201ENST00000332728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.96■■□□□ 1.75
LYSMD4-201ENST00000332728 NUP153P49790 1475 aaKnown RBP25.93■■□□□ 1.74
LYSMD4-201ENST00000332728 KDM6BO15054 1643 aa25.93■■□□□ 1.74
LYSMD4-201ENST00000332728 KIAA0556O60303 1618 aa25.92■■□□□ 1.74
LYSMD4-201ENST00000332728 UACAQ9BZF9 1416 aa25.91■■□□□ 1.74
LYSMD4-201ENST00000332728 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
LYSMD4-201ENST00000332728 CFDP1Q9UEE9 299 aaPredicted RBP25.9■■□□□ 1.74
LYSMD4-201ENST00000332728 CDK11AQ9UQ88 783 aaPredicted RBP25.88■■□□□ 1.73
LYSMD4-201ENST00000332728 MPHOSPH9Q99550 1183 aa25.87■■□□□ 1.73
LYSMD4-201ENST00000332728 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
LYSMD4-201ENST00000332728 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
LYSMD4-201ENST00000332728 CNGB1Q14028 1251 aaPredicted RBP25.81■■□□□ 1.72
LYSMD4-201ENST00000332728 MAGI1Q96QZ7 1491 aaPredicted RBP25.8■■□□□ 1.72
LYSMD4-201ENST00000332728 SLC4A1APQ9BWU0 796 aaKnown RBP25.79■■□□□ 1.72
LYSMD4-201ENST00000332728 RAPGEF6Q8TEU7 1601 aa25.79■■□□□ 1.72
LYSMD4-201ENST00000332728 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
LYSMD4-201ENST00000332728 L3MBTL2Q969R5 705 aa25.76■■□□□ 1.71
LYSMD4-201ENST00000332728 ABCC5O15440 1437 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms