RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
SHC4-201ENST00000332408 IGF1RP08069 1367 aa17.44■□□□□ 0.38
SHC4-201ENST00000332408 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
SHC4-201ENST00000332408 LOC105371045A0A1W2PR82 267 aa17.39■□□□□ 0.37
SHC4-201ENST00000332408 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
SHC4-201ENST00000332408 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
SHC4-201ENST00000332408 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
SHC4-201ENST00000332408 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
SHC4-201ENST00000332408 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.37
SHC4-201ENST00000332408 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
SHC4-201ENST00000332408 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
SHC4-201ENST00000332408 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
SHC4-201ENST00000332408 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
SHC4-201ENST00000332408 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
SHC4-201ENST00000332408 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
SHC4-201ENST00000332408 CLIP1P30622 1438 aa17.28■□□□□ 0.36
SHC4-201ENST00000332408 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
SHC4-201ENST00000332408 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
SHC4-201ENST00000332408 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
SHC4-201ENST00000332408 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
SHC4-201ENST00000332408 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
SHC4-201ENST00000332408 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
SHC4-201ENST00000332408 CUL7Q14999 1698 aa17.19■□□□□ 0.34
SHC4-201ENST00000332408 ITGAEP38570 1179 aa17.19■□□□□ 0.34
SHC4-201ENST00000332408 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
SHC4-201ENST00000332408 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
SHC4-201ENST00000332408 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
SHC4-201ENST00000332408 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
SHC4-201ENST00000332408 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
SHC4-201ENST00000332408 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
SHC4-201ENST00000332408 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.32
SHC4-201ENST00000332408 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
SHC4-201ENST00000332408 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
SHC4-201ENST00000332408 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
SHC4-201ENST00000332408 FHOD3Q2V2M9 1422 aa17.06■□□□□ 0.32
SHC4-201ENST00000332408 IQGAP2Q13576 1575 aa17.06■□□□□ 0.32
SHC4-201ENST00000332408 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
SHC4-201ENST00000332408 CEP162Q5TB80 1403 aa17.03■□□□□ 0.32
SHC4-201ENST00000332408 NUP160Q12769 1436 aa17.02■□□□□ 0.32
SHC4-201ENST00000332408 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
SHC4-201ENST00000332408 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
SHC4-201ENST00000332408 PRXQ9BXM0 1461 aa16.99■□□□□ 0.31
SHC4-201ENST00000332408 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
SHC4-201ENST00000332408 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
SHC4-201ENST00000332408 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
SHC4-201ENST00000332408 BCANQ96GW7 911 aa16.95■□□□□ 0.3
SHC4-201ENST00000332408 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
SHC4-201ENST00000332408 MLECQ14165 292 aa16.94■□□□□ 0.3
SHC4-201ENST00000332408 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
SHC4-201ENST00000332408 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
SHC4-201ENST00000332408 CHD1O14646 1710 aa16.89■□□□□ 0.29
SHC4-201ENST00000332408 RSPH4AQ5TD94 716 aa16.87■□□□□ 0.29
SHC4-201ENST00000332408 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
SHC4-201ENST00000332408 KIF21BO75037 1637 aa16.86■□□□□ 0.29
SHC4-201ENST00000332408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
SHC4-201ENST00000332408 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.29
SHC4-201ENST00000332408 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
SHC4-201ENST00000332408 CD109Q6YHK3 1445 aa16.82■□□□□ 0.28
SHC4-201ENST00000332408 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
SHC4-201ENST00000332408 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
SHC4-201ENST00000332408 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
SHC4-201ENST00000332408 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
SHC4-201ENST00000332408 ASXL2Q76L83 1435 aa16.77■□□□□ 0.28
SHC4-201ENST00000332408 UGGT2Q9NYU1 1516 aa16.76■□□□□ 0.27
SHC4-201ENST00000332408 KANK1Q14678 1352 aa16.76■□□□□ 0.27
SHC4-201ENST00000332408 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
SHC4-201ENST00000332408 GGT6Q6P531 493 aa16.75■□□□□ 0.27
SHC4-201ENST00000332408 ACIN1Q9UKV3 1341 aaKnown RBP16.75■□□□□ 0.27
SHC4-201ENST00000332408 POGZQ7Z3K3 1410 aa16.75■□□□□ 0.27
SHC4-201ENST00000332408 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
SHC4-201ENST00000332408 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
SHC4-201ENST00000332408 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
SHC4-201ENST00000332408 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
SHC4-201ENST00000332408 RIMBP3CA6NJZ7 1639 aa16.71■□□□□ 0.27
SHC4-201ENST00000332408 RIMBP3BA6NNM3 1639 aa16.71■□□□□ 0.27
SHC4-201ENST00000332408 RIMBP3Q9UFD9 1639 aa16.71■□□□□ 0.27
SHC4-201ENST00000332408 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
SHC4-201ENST00000332408 HECW1Q76N89 1606 aa16.7■□□□□ 0.26
SHC4-201ENST00000332408 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHC4-201ENST00000332408 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
SHC4-201ENST00000332408 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
SHC4-201ENST00000332408 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
SHC4-201ENST00000332408 TROQ12816 1431 aaPredicted RBP16.68■□□□□ 0.26
SHC4-201ENST00000332408 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
SHC4-201ENST00000332408 KIAA0556O60303 1618 aa16.67■□□□□ 0.26
SHC4-201ENST00000332408 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
SHC4-201ENST00000332408 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
SHC4-201ENST00000332408 FYCO1Q9BQS8 1478 aa16.64■□□□□ 0.25
SHC4-201ENST00000332408 KIF3BO15066 747 aa16.64■□□□□ 0.25
SHC4-201ENST00000332408 PLEKHH2Q8IVE3 1493 aa16.64■□□□□ 0.25
SHC4-201ENST00000332408 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
SHC4-201ENST00000332408 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
SHC4-201ENST00000332408 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
SHC4-201ENST00000332408 SCAPERQ9BY12 1400 aa16.61■□□□□ 0.25
SHC4-201ENST00000332408 WASHC2CQ9Y4E1 1318 aa16.6■□□□□ 0.25
SHC4-201ENST00000332408 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
SHC4-201ENST00000332408 UHRF1BP1LA0JNW5 1464 aa16.59■□□□□ 0.25
SHC4-201ENST00000332408 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
SHC4-201ENST00000332408 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
SHC4-201ENST00000332408 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms