RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 FKBP8Q14318 412 aa19.13■□□□□ 0.65
PRKD1-201ENST00000331968 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
PRKD1-201ENST00000331968 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
PRKD1-201ENST00000331968 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
PRKD1-201ENST00000331968 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.65
PRKD1-201ENST00000331968 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.64
PRKD1-201ENST00000331968 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
PRKD1-201ENST00000331968 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
PRKD1-201ENST00000331968 IGF1RP08069 1367 aa19.06■□□□□ 0.64
PRKD1-201ENST00000331968 FOXD1Q16676 465 aa19.02■□□□□ 0.64
PRKD1-201ENST00000331968 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
PRKD1-201ENST00000331968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.63
PRKD1-201ENST00000331968 IRX6P78412 446 aaPredicted RBP19.01■□□□□ 0.63
PRKD1-201ENST00000331968 CC2D2AQ9P2K1 1620 aa18.98■□□□□ 0.63
PRKD1-201ENST00000331968 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
PRKD1-201ENST00000331968 CCNB3Q8WWL7 1395 aa18.97■□□□□ 0.63
PRKD1-201ENST00000331968 CUX1P39880 1505 aa18.94■□□□□ 0.62
PRKD1-201ENST00000331968 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
PRKD1-201ENST00000331968 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
PRKD1-201ENST00000331968 CFTRP13569 1480 aa18.92■□□□□ 0.62
PRKD1-201ENST00000331968 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
PRKD1-201ENST00000331968 TONSLQ96HA7 1378 aa18.91■□□□□ 0.62
PRKD1-201ENST00000331968 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRKD1-201ENST00000331968 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
PRKD1-201ENST00000331968 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
PRKD1-201ENST00000331968 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PRKD1-201ENST00000331968 ANP32CO43423 234 aa18.84■□□□□ 0.61
PRKD1-201ENST00000331968 KIF21BO75037 1637 aa18.83■□□□□ 0.61
PRKD1-201ENST00000331968 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
PRKD1-201ENST00000331968 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
PRKD1-201ENST00000331968 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
PRKD1-201ENST00000331968 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
PRKD1-201ENST00000331968 PLPPR3Q6T4P5 718 aa18.76■□□□□ 0.59
PRKD1-201ENST00000331968 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
PRKD1-201ENST00000331968 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
PRKD1-201ENST00000331968 SALL2Q9Y467 1007 aaPredicted RBP18.74■□□□□ 0.59
PRKD1-201ENST00000331968 TSHZ2Q9NRE2 1034 aa18.74■□□□□ 0.59
PRKD1-201ENST00000331968 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
PRKD1-201ENST00000331968 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
PRKD1-201ENST00000331968 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
PRKD1-201ENST00000331968 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
PRKD1-201ENST00000331968 CHGAP10645 457 aaKnown RBP18.72■□□□□ 0.59
PRKD1-201ENST00000331968 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
PRKD1-201ENST00000331968 PHLDB1Q86UU1 1377 aa18.71■□□□□ 0.59
PRKD1-201ENST00000331968 ANP32EQ9BTT0 268 aa18.71■□□□□ 0.59
PRKD1-201ENST00000331968 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
PRKD1-201ENST00000331968 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
PRKD1-201ENST00000331968 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.58
PRKD1-201ENST00000331968 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
PRKD1-201ENST00000331968 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
PRKD1-201ENST00000331968 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
PRKD1-201ENST00000331968 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
PRKD1-201ENST00000331968 SETD5Q9C0A6 1442 aa18.65■□□□□ 0.58
PRKD1-201ENST00000331968 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
PRKD1-201ENST00000331968 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKD1-201ENST00000331968 NBR1Q14596 966 aa18.61■□□□□ 0.57
PRKD1-201ENST00000331968 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
PRKD1-201ENST00000331968 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
PRKD1-201ENST00000331968 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
PRKD1-201ENST00000331968 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
PRKD1-201ENST00000331968 RBM19Q9Y4C8 960 aaKnown RBP18.53■□□□□ 0.56
PRKD1-201ENST00000331968 EIF4G2P78344 907 aaKnown RBP eCLIP18.52■□□□□ 0.55
PRKD1-201ENST00000331968 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.55
PRKD1-201ENST00000331968 PKD2Q13563 968 aa18.51■□□□□ 0.55
PRKD1-201ENST00000331968 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
PRKD1-201ENST00000331968 L3MBTL2Q969R5 705 aa18.48■□□□□ 0.55
PRKD1-201ENST00000331968 PPP1R15AO75807 674 aaPredicted RBP18.48■□□□□ 0.55
PRKD1-201ENST00000331968 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
PRKD1-201ENST00000331968 DCAF11Q8TEB1 546 aa18.46■□□□□ 0.55
PRKD1-201ENST00000331968 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
PRKD1-201ENST00000331968 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
PRKD1-201ENST00000331968 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
PRKD1-201ENST00000331968 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
PRKD1-201ENST00000331968 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
PRKD1-201ENST00000331968 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
PRKD1-201ENST00000331968 B4GALNT3Q6L9W6 998 aa18.41■□□□□ 0.54
PRKD1-201ENST00000331968 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.54
PRKD1-201ENST00000331968 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
PRKD1-201ENST00000331968 NUP155O75694 1391 aa18.35■□□□□ 0.53
PRKD1-201ENST00000331968 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
PRKD1-201ENST00000331968 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
PRKD1-201ENST00000331968 GGT6Q6P531 493 aa18.32■□□□□ 0.52
PRKD1-201ENST00000331968 TMC1Q8TDI8 760 aa18.32■□□□□ 0.52
PRKD1-201ENST00000331968 ABCA10Q8WWZ4 1543 aa18.32■□□□□ 0.52
PRKD1-201ENST00000331968 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
PRKD1-201ENST00000331968 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
PRKD1-201ENST00000331968 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
PRKD1-201ENST00000331968 NUTM2DQ5VT03 806 aaPredicted RBP18.31■□□□□ 0.52
PRKD1-201ENST00000331968 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
PRKD1-201ENST00000331968 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
PRKD1-201ENST00000331968 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
PRKD1-201ENST00000331968 MLECQ14165 292 aa18.3■□□□□ 0.52
PRKD1-201ENST00000331968 PTPRGP23470 1445 aa18.3■□□□□ 0.52
PRKD1-201ENST00000331968 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
PRKD1-201ENST00000331968 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
PRKD1-201ENST00000331968 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
PRKD1-201ENST00000331968 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
PRKD1-201ENST00000331968 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
PRKD1-201ENST00000331968 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.51
PRKD1-201ENST00000331968 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms