RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
CDCA2-201ENST00000330560 ARHGAP35Q9NRY4 1499 aa21.47■■□□□ 1.03
CDCA2-201ENST00000330560 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
CDCA2-201ENST00000330560 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
CDCA2-201ENST00000330560 DHX57Q6P158 1386 aaKnown RBP21.45■■□□□ 1.02
CDCA2-201ENST00000330560 MTUS2Q5JR59 1369 aa21.44■■□□□ 1.02
CDCA2-201ENST00000330560 RRP7BPQ9NSQ0 103 aa21.43■■□□□ 1.02
CDCA2-201ENST00000330560 RAB3GAP2Q9H2M9 1393 aa21.41■■□□□ 1.02
CDCA2-201ENST00000330560 PHLDB1Q86UU1 1377 aa21.34■■□□□ 1.01
CDCA2-201ENST00000330560 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
CDCA2-201ENST00000330560 POLR3GLQ9BT43 218 aa21.33■■□□□ 1.01
CDCA2-201ENST00000330560 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
CDCA2-201ENST00000330560 BCANQ96GW7 911 aa21.3■■□□□ 1
CDCA2-201ENST00000330560 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
CDCA2-201ENST00000330560 KCNH8Q96L42 1107 aa21.3■■□□□ 1
CDCA2-201ENST00000330560 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
CDCA2-201ENST00000330560 FHAD1B1AJZ9 1412 aa21.25■□□□□ 0.99
CDCA2-201ENST00000330560 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
CDCA2-201ENST00000330560 FOXD1Q16676 465 aa21.23■□□□□ 0.99
CDCA2-201ENST00000330560 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
CDCA2-201ENST00000330560 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
CDCA2-201ENST00000330560 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
CDCA2-201ENST00000330560 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
CDCA2-201ENST00000330560 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
CDCA2-201ENST00000330560 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.989e-8■■■■■ 33.5
CDCA2-201ENST00000330560 CLSPNQ9HAW4 1339 aa21.16■□□□□ 0.98
CDCA2-201ENST00000330560 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CDCA2-201ENST00000330560 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
CDCA2-201ENST00000330560 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
CDCA2-201ENST00000330560 ANP32CO43423 234 aa21.08■□□□□ 0.97
CDCA2-201ENST00000330560 SENP3-EIF4A1A0A087X0R7 540 aa21.06■□□□□ 0.96
CDCA2-201ENST00000330560 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
CDCA2-201ENST00000330560 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
CDCA2-201ENST00000330560 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
CDCA2-201ENST00000330560 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
CDCA2-201ENST00000330560 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
CDCA2-201ENST00000330560 ZNF644Q9H582 1327 aaPredicted RBP21■□□□□ 0.95
CDCA2-201ENST00000330560 PPP1R15AO75807 674 aaPredicted RBP20.99■□□□□ 0.95
CDCA2-201ENST00000330560 ABCA10Q8WWZ4 1543 aa20.98■□□□□ 0.95
CDCA2-201ENST00000330560 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
CDCA2-201ENST00000330560 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
CDCA2-201ENST00000330560 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
CDCA2-201ENST00000330560 CDK11AQ9UQ88 783 aaPredicted RBP20.96■□□□□ 0.95
CDCA2-201ENST00000330560 NEFLP07196 543 aa20.95■□□□□ 0.94
CDCA2-201ENST00000330560 FKBP8Q14318 412 aa20.93■□□□□ 0.94
CDCA2-201ENST00000330560 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
CDCA2-201ENST00000330560 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
CDCA2-201ENST00000330560 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
CDCA2-201ENST00000330560 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
CDCA2-201ENST00000330560 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
CDCA2-201ENST00000330560 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
CDCA2-201ENST00000330560 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDCA2-201ENST00000330560 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
CDCA2-201ENST00000330560 FAM9BQ8IZU0 186 aa20.85■□□□□ 0.93
CDCA2-201ENST00000330560 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
CDCA2-201ENST00000330560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.93
CDCA2-201ENST00000330560 CCDC18Q5T9S5 1454 aa20.84■□□□□ 0.93
CDCA2-201ENST00000330560 SUPT16HQ9Y5B9 1047 aaKnown RBP20.83■□□□□ 0.93
CDCA2-201ENST00000330560 FYCO1Q9BQS8 1478 aa20.83■□□□□ 0.92
CDCA2-201ENST00000330560 WDR97A6NE52 1622 aa20.82■□□□□ 0.92
CDCA2-201ENST00000330560 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
CDCA2-201ENST00000330560 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
CDCA2-201ENST00000330560 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
CDCA2-201ENST00000330560 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
CDCA2-201ENST00000330560 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
CDCA2-201ENST00000330560 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
CDCA2-201ENST00000330560 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
CDCA2-201ENST00000330560 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
CDCA2-201ENST00000330560 MAPKBP1O60336 1514 aa20.77■□□□□ 0.92
CDCA2-201ENST00000330560 CDK13Q14004 1512 aaKnown RBP20.77■□□□□ 0.92
CDCA2-201ENST00000330560 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
CDCA2-201ENST00000330560 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
CDCA2-201ENST00000330560 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
CDCA2-201ENST00000330560 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
CDCA2-201ENST00000330560 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
CDCA2-201ENST00000330560 HNRNPMP52272 730 aaKnown RBP eCLIP20.68■□□□□ 0.91e-6■■■■■ 43.8
CDCA2-201ENST00000330560 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
CDCA2-201ENST00000330560 PKD2Q13563 968 aa20.67■□□□□ 0.9
CDCA2-201ENST00000330560 NAIPQ13075 1403 aa20.67■□□□□ 0.9
CDCA2-201ENST00000330560 MRS2Q9HD23 443 aa20.66■□□□□ 0.9
CDCA2-201ENST00000330560 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
CDCA2-201ENST00000330560 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
CDCA2-201ENST00000330560 UACAQ9BZF9 1416 aa20.64■□□□□ 0.89
CDCA2-201ENST00000330560 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
CDCA2-201ENST00000330560 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
CDCA2-201ENST00000330560 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
CDCA2-201ENST00000330560 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
CDCA2-201ENST00000330560 SNAPC4Q5SXM2 1469 aa20.63■□□□□ 0.89
CDCA2-201ENST00000330560 PRG4Q92954 1404 aaPredicted RBP20.63■□□□□ 0.89
CDCA2-201ENST00000330560 CUL7Q14999 1698 aa20.63■□□□□ 0.89
CDCA2-201ENST00000330560 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CDCA2-201ENST00000330560 EPRSP07814 1512 aaKnown RBP20.6■□□□□ 0.89
CDCA2-201ENST00000330560 NBPF8Q3BBV2 869 aa20.57■□□□□ 0.88
CDCA2-201ENST00000330560 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
CDCA2-201ENST00000330560 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
CDCA2-201ENST00000330560 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
CDCA2-201ENST00000330560 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
CDCA2-201ENST00000330560 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
CDCA2-201ENST00000330560 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
CDCA2-201ENST00000330560 IQGAP2Q13576 1575 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms