RNA–Protein interactions for RNA: ENST00000329092.12

RPL35A-201, Transcript of ribosomal protein L35a, humanhuman

TSL 3

Gene RPL35A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-201ENST00000329092 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
RPL35A-201ENST00000329092 ABCC8Q09428 1581 aa10.7□□□□□ -0.7
RPL35A-201ENST00000329092 SOGA1O94964 1423 aa10.68□□□□□ -0.7
RPL35A-201ENST00000329092 APLP2Q06481 763 aa10.68□□□□□ -0.7
RPL35A-201ENST00000329092 CHMP7Q8WUX9 453 aaPredicted RBP10.67□□□□□ -0.7
RPL35A-201ENST00000329092 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
RPL35A-201ENST00000329092 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
RPL35A-201ENST00000329092 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
RPL35A-201ENST00000329092 SNAPC4Q5SXM2 1469 aa10.66□□□□□ -0.7
RPL35A-201ENST00000329092 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
RPL35A-201ENST00000329092 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
RPL35A-201ENST00000329092 DSG3P32926 999 aa10.58□□□□□ -0.72
RPL35A-201ENST00000329092 CUX1P39880 1505 aa10.58□□□□□ -0.72
RPL35A-201ENST00000329092 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
RPL35A-201ENST00000329092 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
RPL35A-201ENST00000329092 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
RPL35A-201ENST00000329092 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
RPL35A-201ENST00000329092 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
RPL35A-201ENST00000329092 SYNJ1O43426 1573 aa10.55□□□□□ -0.72
RPL35A-201ENST00000329092 ZBTB22O15209 634 aa10.54□□□□□ -0.72
RPL35A-201ENST00000329092 ERCC6L2Q5T890 1561 aa10.54□□□□□ -0.72
RPL35A-201ENST00000329092 ABCB7O75027 752 aa10.49□□□□□ -0.73
RPL35A-201ENST00000329092 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
RPL35A-201ENST00000329092 ABCA10Q8WWZ4 1543 aa10.45□□□□□ -0.74
RPL35A-201ENST00000329092 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
RPL35A-201ENST00000329092 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
RPL35A-201ENST00000329092 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
RPL35A-201ENST00000329092 NUP160Q12769 1436 aa10.42□□□□□ -0.74
RPL35A-201ENST00000329092 ABCA5Q8WWZ7 1642 aa10.42□□□□□ -0.74
RPL35A-201ENST00000329092 KDM4FA0A1W2PPD8 638 aa10.39□□□□□ -0.75
RPL35A-201ENST00000329092 FAM69CQ0P6D2 419 aa10.39□□□□□ -0.75
RPL35A-201ENST00000329092 JPH4Q96JJ6 628 aa10.39□□□□□ -0.75
RPL35A-201ENST00000329092 ATF5Q9Y2D1 282 aaPredicted RBP10.39□□□□□ -0.75
RPL35A-201ENST00000329092 SUPT5HO00267 1087 aaKnown RBP10.37□□□□□ -0.75
RPL35A-201ENST00000329092 PRG4Q92954 1404 aaPredicted RBP10.37□□□□□ -0.75
RPL35A-201ENST00000329092 FHAD1B1AJZ9 1412 aa10.36□□□□□ -0.75
RPL35A-201ENST00000329092 WRNQ14191 1432 aaPredicted RBP eCLIP10.36□□□□□ -0.75
RPL35A-201ENST00000329092 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
RPL35A-201ENST00000329092 POLA2Q14181 598 aa10.35□□□□□ -0.75
RPL35A-201ENST00000329092 SHROOM2Q13796 1616 aa10.35□□□□□ -0.75
RPL35A-201ENST00000329092 KIF13AQ9H1H9 1805 aa10.34□□□□□ -0.75
RPL35A-201ENST00000329092 ABCC10Q5T3U5 1492 aa10.31□□□□□ -0.76
RPL35A-201ENST00000329092 ILDR1Q86SU0 546 aaPredicted RBP10.31□□□□□ -0.76
RPL35A-201ENST00000329092 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
RPL35A-201ENST00000329092 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPL35A-201ENST00000329092 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
RPL35A-201ENST00000329092 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
RPL35A-201ENST00000329092 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
RPL35A-201ENST00000329092 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
RPL35A-201ENST00000329092 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
RPL35A-201ENST00000329092 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
RPL35A-201ENST00000329092 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
RPL35A-201ENST00000329092 DIP2BQ9P265 1576 aa10.24□□□□□ -0.77
RPL35A-201ENST00000329092 MAPKBP1O60336 1514 aa10.23□□□□□ -0.77
RPL35A-201ENST00000329092 IGF1RP08069 1367 aa10.22□□□□□ -0.77
RPL35A-201ENST00000329092 RUSC2Q8N2Y8 1516 aa10.22□□□□□ -0.77
RPL35A-201ENST00000329092 KDM6BO15054 1643 aa10.2□□□□□ -0.78
RPL35A-201ENST00000329092 KIAA0586Q9BVV6 1533 aa10.18□□□□□ -0.78
RPL35A-201ENST00000329092 COL17A1Q9UMD9 1497 aaPredicted RBP10.18□□□□□ -0.78
RPL35A-201ENST00000329092 TSPOAP1O95153 1857 aa10.18□□□□□ -0.78
RPL35A-201ENST00000329092 PTPRGP23470 1445 aa10.17□□□□□ -0.78
RPL35A-201ENST00000329092 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
RPL35A-201ENST00000329092 ASXL2Q76L83 1435 aa10.14□□□□□ -0.79
RPL35A-201ENST00000329092 ADGRL1O94910 1474 aa10.12□□□□□ -0.79
RPL35A-201ENST00000329092 PPRC1Q5VV67 1664 aaKnown RBP10.11□□□□□ -0.79
RPL35A-201ENST00000329092 CARMIL1Q5VZK9 1371 aa10.11□□□□□ -0.79
RPL35A-201ENST00000329092 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
RPL35A-201ENST00000329092 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
RPL35A-201ENST00000329092 ABCC2Q92887 1545 aa10.1□□□□□ -0.79
RPL35A-201ENST00000329092 KIF27Q86VH2 1401 aa10.09□□□□□ -0.79
RPL35A-201ENST00000329092 PLB1Q6P1J6 1458 aa10.08□□□□□ -0.8
RPL35A-201ENST00000329092 UACAQ9BZF9 1416 aa10.07□□□□□ -0.8
RPL35A-201ENST00000329092 DISP1Q96F81 1524 aa10.07□□□□□ -0.8
RPL35A-201ENST00000329092 GLI2P10070 1586 aa10.06□□□□□ -0.8
RPL35A-201ENST00000329092 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
RPL35A-201ENST00000329092 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
RPL35A-201ENST00000329092 HECW2Q9P2P5 1572 aa10.05□□□□□ -0.8
RPL35A-201ENST00000329092 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
RPL35A-201ENST00000329092 CUL7Q14999 1698 aa10.03□□□□□ -0.8
RPL35A-201ENST00000329092 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.8
RPL35A-201ENST00000329092 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
RPL35A-201ENST00000329092 IQGAP2Q13576 1575 aa10□□□□□ -0.81
RPL35A-201ENST00000329092 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
RPL35A-201ENST00000329092 ZCCHC11Q5TAX3 1644 aaKnown RBP9.97□□□□□ -0.81
RPL35A-201ENST00000329092 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
RPL35A-201ENST00000329092 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
RPL35A-201ENST00000329092 CD109Q6YHK3 1445 aa9.96□□□□□ -0.82
RPL35A-201ENST00000329092 UGGT2Q9NYU1 1516 aa9.96□□□□□ -0.82
RPL35A-201ENST00000329092 FBXO41Q8TF61 875 aa9.95□□□□□ -0.82
RPL35A-201ENST00000329092 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
RPL35A-201ENST00000329092 RAPGEF2Q9Y4G8 1499 aa9.94□□□□□ -0.82
RPL35A-201ENST00000329092 KIAA0556O60303 1618 aa9.93□□□□□ -0.82
RPL35A-201ENST00000329092 MAGI3Q5TCQ9 1506 aa9.92□□□□□ -0.82
RPL35A-201ENST00000329092 RAPGEF3O95398 923 aa9.91□□□□□ -0.82
RPL35A-201ENST00000329092 MKRN4PQ13434 485 aaPredicted RBP9.91□□□□□ -0.82
RPL35A-201ENST00000329092 P3H3Q8IVL6 736 aa9.91□□□□□ -0.82
RPL35A-201ENST00000329092 AKT1S1Q96B36 256 aa9.91□□□□□ -0.82
RPL35A-201ENST00000329092 ABCA8O94911 1581 aa9.88□□□□□ -0.83
RPL35A-201ENST00000329092 KIF21BO75037 1637 aa9.88□□□□□ -0.83
RPL35A-201ENST00000329092 PTPRMP28827 1452 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms