RNA–Protein interactions for RNA: ENST00000327925.5

CCDC144NL-201, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC144NL, Length 2,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-201ENST00000327925 FGD5Q6ZNL6 1462 aa18.59■□□□□ 0.57
CCDC144NL-201ENST00000327925 CUX2O14529 1486 aa18.58■□□□□ 0.57
CCDC144NL-201ENST00000327925 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-201ENST00000327925 IRX6P78412 446 aaPredicted RBP18.57■□□□□ 0.56
CCDC144NL-201ENST00000327925 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
CCDC144NL-201ENST00000327925 DEKP35659 375 aaKnown RBP18.55■□□□□ 0.56
CCDC144NL-201ENST00000327925 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
CCDC144NL-201ENST00000327925 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
CCDC144NL-201ENST00000327925 IGF1RP08069 1367 aa18.47■□□□□ 0.55
CCDC144NL-201ENST00000327925 VPS8Q8N3P4 1428 aa18.46■□□□□ 0.55
CCDC144NL-201ENST00000327925 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
CCDC144NL-201ENST00000327925 NBR1Q14596 966 aa18.45■□□□□ 0.54
CCDC144NL-201ENST00000327925 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
CCDC144NL-201ENST00000327925 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
CCDC144NL-201ENST00000327925 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
CCDC144NL-201ENST00000327925 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
CCDC144NL-201ENST00000327925 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
CCDC144NL-201ENST00000327925 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 CARMIL1Q5VZK9 1371 aa18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
CCDC144NL-201ENST00000327925 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
CCDC144NL-201ENST00000327925 KIF21AQ7Z4S6 1674 aa18.36■□□□□ 0.53
CCDC144NL-201ENST00000327925 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
CCDC144NL-201ENST00000327925 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
CCDC144NL-201ENST00000327925 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.52
CCDC144NL-201ENST00000327925 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
CCDC144NL-201ENST00000327925 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 RTN4Q9NQC3 1192 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 ANP32CO43423 234 aa18.29■□□□□ 0.52
CCDC144NL-201ENST00000327925 ABCA10Q8WWZ4 1543 aa18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
CCDC144NL-201ENST00000327925 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
CCDC144NL-201ENST00000327925 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCDC144NL-201ENST00000327925 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
CCDC144NL-201ENST00000327925 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
CCDC144NL-201ENST00000327925 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
CCDC144NL-201ENST00000327925 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
CCDC144NL-201ENST00000327925 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
CCDC144NL-201ENST00000327925 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CCDC144NL-201ENST00000327925 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
CCDC144NL-201ENST00000327925 CCER2I3L3R5 266 aa18.18■□□□□ 0.5
CCDC144NL-201ENST00000327925 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
CCDC144NL-201ENST00000327925 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
CCDC144NL-201ENST00000327925 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
CCDC144NL-201ENST00000327925 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.492e-7■■■■■ 31
CCDC144NL-201ENST00000327925 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
CCDC144NL-201ENST00000327925 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
CCDC144NL-201ENST00000327925 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
CCDC144NL-201ENST00000327925 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.49
CCDC144NL-201ENST00000327925 TARBP1Q13395 1621 aaKnown RBP18.07■□□□□ 0.48
CCDC144NL-201ENST00000327925 CUL7Q14999 1698 aa18.07■□□□□ 0.48
CCDC144NL-201ENST00000327925 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
CCDC144NL-201ENST00000327925 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
CCDC144NL-201ENST00000327925 PCF11O94913 1555 aaKnown RBP18.05■□□□□ 0.48
CCDC144NL-201ENST00000327925 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
CCDC144NL-201ENST00000327925 MRC2Q9UBG0 1479 aa18.04■□□□□ 0.48
CCDC144NL-201ENST00000327925 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
CCDC144NL-201ENST00000327925 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
CCDC144NL-201ENST00000327925 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
CCDC144NL-201ENST00000327925 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
CCDC144NL-201ENST00000327925 FAM50AQ14320 339 aaKnown RBP17.98■□□□□ 0.47
CCDC144NL-201ENST00000327925 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
CCDC144NL-201ENST00000327925 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
CCDC144NL-201ENST00000327925 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
CCDC144NL-201ENST00000327925 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
CCDC144NL-201ENST00000327925 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 ANP32AP39687 249 aaKnown RBP17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
CCDC144NL-201ENST00000327925 IPO9Q96P70 1041 aaKnown RBP17.91■□□□□ 0.46
CCDC144NL-201ENST00000327925 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
CCDC144NL-201ENST00000327925 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
CCDC144NL-201ENST00000327925 WDR62O43379 1518 aa17.87■□□□□ 0.45
CCDC144NL-201ENST00000327925 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
CCDC144NL-201ENST00000327925 FBLN2P98095 1184 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
CCDC144NL-201ENST00000327925 UBE2Q2Q8WVN8 375 aa17.85■□□□□ 0.45
CCDC144NL-201ENST00000327925 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
CCDC144NL-201ENST00000327925 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 FYCO1Q9BQS8 1478 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
CCDC144NL-201ENST00000327925 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
CCDC144NL-201ENST00000327925 TONSLQ96HA7 1378 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 NEFMP07197 916 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
CCDC144NL-201ENST00000327925 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
CCDC144NL-201ENST00000327925 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms