RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 DIEXFQ68CQ4 756 aaKnown RBP14.61□□□□□ -0.07
SP1-201ENST00000327443 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
SP1-201ENST00000327443 CUX2O14529 1486 aa14.57□□□□□ -0.08
SP1-201ENST00000327443 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
SP1-201ENST00000327443 CCDC136Q96JN2 1154 aa14.56□□□□□ -0.08
SP1-201ENST00000327443 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
SP1-201ENST00000327443 IGF1RP08069 1367 aa14.51□□□□□ -0.09
SP1-201ENST00000327443 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
SP1-201ENST00000327443 ERCC6Q03468 1493 aa14.49□□□□□ -0.09
SP1-201ENST00000327443 RAPGEF2Q9Y4G8 1499 aa14.49□□□□□ -0.09
SP1-201ENST00000327443 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
SP1-201ENST00000327443 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
SP1-201ENST00000327443 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
SP1-201ENST00000327443 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
SP1-201ENST00000327443 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
SP1-201ENST00000327443 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
SP1-201ENST00000327443 GRIN2BQ13224 1484 aa14.42□□□□□ -0.1
SP1-201ENST00000327443 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
SP1-201ENST00000327443 SUPT16HQ9Y5B9 1047 aaKnown RBP14.38□□□□□ -0.11
SP1-201ENST00000327443 EFCAB5A4FU69 1503 aa14.38□□□□□ -0.11
SP1-201ENST00000327443 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
SP1-201ENST00000327443 PKNOX2Q96KN3 472 aa14.38□□□□□ -0.11
SP1-201ENST00000327443 PODXL2Q9NZ53 605 aa14.37□□□□□ -0.11
SP1-201ENST00000327443 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
SP1-201ENST00000327443 CLIP1P30622 1438 aa14.34□□□□□ -0.11
SP1-201ENST00000327443 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
SP1-201ENST00000327443 VPS8Q8N3P4 1428 aa14.3□□□□□ -0.12
SP1-201ENST00000327443 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
SP1-201ENST00000327443 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
SP1-201ENST00000327443 UBTFP17480 764 aaKnown RBP14.28□□□□□ -0.12
SP1-201ENST00000327443 MAP3K1Q13233 1512 aa14.28□□□□□ -0.12
SP1-201ENST00000327443 ZNF608Q9ULD9 1512 aaPredicted RBP14.26□□□□□ -0.13
SP1-201ENST00000327443 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
SP1-201ENST00000327443 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
SP1-201ENST00000327443 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■■□ 20.3
SP1-201ENST00000327443 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
SP1-201ENST00000327443 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
SP1-201ENST00000327443 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
SP1-201ENST00000327443 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
SP1-201ENST00000327443 GRIN2AQ12879 1464 aa14.22□□□□□ -0.13
SP1-201ENST00000327443 IQGAP2Q13576 1575 aa14.21□□□□□ -0.13
SP1-201ENST00000327443 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
SP1-201ENST00000327443 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
SP1-201ENST00000327443 NUP160Q12769 1436 aa14.18□□□□□ -0.14
SP1-201ENST00000327443 MSH5O43196 834 aa14.18□□□□□ -0.14
SP1-201ENST00000327443 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
SP1-201ENST00000327443 MIER1Q8N108 512 aa14.16□□□□□ -0.14
SP1-201ENST00000327443 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
SP1-201ENST00000327443 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.15
SP1-201ENST00000327443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
SP1-201ENST00000327443 FYCO1Q9BQS8 1478 aa14.14□□□□□ -0.15
SP1-201ENST00000327443 CCER1Q8TC90 406 aaPredicted RBP14.13□□□□□ -0.15
SP1-201ENST00000327443 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
SP1-201ENST00000327443 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
SP1-201ENST00000327443 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
SP1-201ENST00000327443 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
SP1-201ENST00000327443 SHROOM2Q13796 1616 aa14.09□□□□□ -0.15
SP1-201ENST00000327443 KIAA0556O60303 1618 aa14.08□□□□□ -0.15
SP1-201ENST00000327443 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
SP1-201ENST00000327443 TIAM1Q13009 1591 aa14.07□□□□□ -0.16
SP1-201ENST00000327443 PCF11O94913 1555 aaKnown RBP14.06□□□□□ -0.16
SP1-201ENST00000327443 CHD1O14646 1710 aa14.06□□□□□ -0.16
SP1-201ENST00000327443 BCANQ96GW7 911 aa14.04□□□□□ -0.16
SP1-201ENST00000327443 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
SP1-201ENST00000327443 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
SP1-201ENST00000327443 DISP1Q96F81 1524 aa14.03□□□□□ -0.16
SP1-201ENST00000327443 IL27Q8NEV9 243 aa14.03□□□□□ -0.16
SP1-201ENST00000327443 CCDC18Q5T9S5 1454 aa14.03□□□□□ -0.16
SP1-201ENST00000327443 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
SP1-201ENST00000327443 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
SP1-201ENST00000327443 CARMIL2Q6F5E8 1435 aa13.97□□□□□ -0.17
SP1-201ENST00000327443 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
SP1-201ENST00000327443 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.18
SP1-201ENST00000327443 LRRIQ1Q96JM4 1722 aa13.95□□□□□ -0.18
SP1-201ENST00000327443 RAPGEF6Q8TEU7 1601 aa13.94□□□□□ -0.18
SP1-201ENST00000327443 EHBP1L1Q8N3D4 1523 aa13.94□□□□□ -0.18
SP1-201ENST00000327443 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
SP1-201ENST00000327443 ABCA8O94911 1581 aa13.91□□□□□ -0.18
SP1-201ENST00000327443 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
SP1-201ENST00000327443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
SP1-201ENST00000327443 ADCY10Q96PN6 1610 aa13.88□□□□□ -0.19
SP1-201ENST00000327443 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
SP1-201ENST00000327443 EPRSP07814 1512 aaKnown RBP13.87□□□□□ -0.19
SP1-201ENST00000327443 NEFLP07196 543 aa13.86□□□□□ -0.19
SP1-201ENST00000327443 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
SP1-201ENST00000327443 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
SP1-201ENST00000327443 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
SP1-201ENST00000327443 UHRF1BP1LA0JNW5 1464 aa13.83□□□□□ -0.19
SP1-201ENST00000327443 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.19
SP1-201ENST00000327443 NBR1Q14596 966 aa13.83□□□□□ -0.19
SP1-201ENST00000327443 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.19
SP1-201ENST00000327443 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
SP1-201ENST00000327443 PDE4CQ08493 712 aa13.81□□□□□ -0.2
SP1-201ENST00000327443 FKBP8Q14318 412 aa13.81□□□□□ -0.2
SP1-201ENST00000327443 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
SP1-201ENST00000327443 ITGAEP38570 1179 aa13.8□□□□□ -0.2
SP1-201ENST00000327443 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
SP1-201ENST00000327443 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
SP1-201ENST00000327443 TCOF1Q13428 1488 aaKnown RBP13.77□□□□□ -0.2
SP1-201ENST00000327443 ABCC2Q92887 1545 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms