RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
ABCF1-201ENST00000326195 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
ABCF1-201ENST00000326195 APLP2Q06481 763 aa15.61■□□□□ 0.09
ABCF1-201ENST00000326195 OSCARQ8IYS5 282 aa15.6■□□□□ 0.09
ABCF1-201ENST00000326195 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
ABCF1-201ENST00000326195 EIF4G3O43432 1585 aaKnown RBP15.6■□□□□ 0.09
ABCF1-201ENST00000326195 CENPBP07199 599 aaPredicted RBP15.58■□□□□ 0.09
ABCF1-201ENST00000326195 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
ABCF1-201ENST00000326195 CLIP1P30622 1438 aa15.55■□□□□ 0.08
ABCF1-201ENST00000326195 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
ABCF1-201ENST00000326195 PRXQ9BXM0 1461 aa15.55■□□□□ 0.08
ABCF1-201ENST00000326195 DIEXFQ68CQ4 756 aaKnown RBP15.55■□□□□ 0.08
ABCF1-201ENST00000326195 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
ABCF1-201ENST00000326195 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.07
ABCF1-201ENST00000326195 FHOD3Q2V2M9 1422 aa15.5■□□□□ 0.07
ABCF1-201ENST00000326195 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
ABCF1-201ENST00000326195 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
ABCF1-201ENST00000326195 GRIN2AQ12879 1464 aa15.46■□□□□ 0.07
ABCF1-201ENST00000326195 ITGAEP38570 1179 aa15.45■□□□□ 0.06
ABCF1-201ENST00000326195 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
ABCF1-201ENST00000326195 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
ABCF1-201ENST00000326195 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
ABCF1-201ENST00000326195 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
ABCF1-201ENST00000326195 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
ABCF1-201ENST00000326195 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
ABCF1-201ENST00000326195 PRG4Q92954 1404 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-201ENST00000326195 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
ABCF1-201ENST00000326195 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
ABCF1-201ENST00000326195 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
ABCF1-201ENST00000326195 KANK4Q5T7N3 995 aaPredicted RBP15.36■□□□□ 0.05
ABCF1-201ENST00000326195 KIF21BO75037 1637 aa15.35■□□□□ 0.05
ABCF1-201ENST00000326195 ARAP1Q96P48 1450 aa15.34■□□□□ 0.05
ABCF1-201ENST00000326195 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
ABCF1-201ENST00000326195 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
ABCF1-201ENST00000326195 CUL7Q14999 1698 aa15.31■□□□□ 0.04
ABCF1-201ENST00000326195 CHD1O14646 1710 aa15.3■□□□□ 0.04
ABCF1-201ENST00000326195 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
ABCF1-201ENST00000326195 PTPRGP23470 1445 aa15.3■□□□□ 0.04
ABCF1-201ENST00000326195 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
ABCF1-201ENST00000326195 CARMIL2Q6F5E8 1435 aa15.28■□□□□ 0.04
ABCF1-201ENST00000326195 NPM1P06748 294 aaKnown RBP eCLIP15.27■□□□□ 0.042e-7■■■■□ 21.1
ABCF1-201ENST00000326195 FAM50AQ14320 339 aaKnown RBP15.26■□□□□ 0.03
ABCF1-201ENST00000326195 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
ABCF1-201ENST00000326195 IQGAP2Q13576 1575 aa15.25■□□□□ 0.03
ABCF1-201ENST00000326195 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
ABCF1-201ENST00000326195 NUP160Q12769 1436 aa15.24■□□□□ 0.03
ABCF1-201ENST00000326195 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
ABCF1-201ENST00000326195 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
ABCF1-201ENST00000326195 MIER1Q8N108 512 aa15.2■□□□□ 0.02
ABCF1-201ENST00000326195 MTUS2Q5JR59 1369 aa15.19■□□□□ 0.02
ABCF1-201ENST00000326195 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
ABCF1-201ENST00000326195 PLEKHD1A6NEE1 506 aa15.19■□□□□ 0.02
ABCF1-201ENST00000326195 ANP32EQ9BTT0 268 aa15.16■□□□□ 0.02
ABCF1-201ENST00000326195 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
ABCF1-201ENST00000326195 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-201ENST00000326195 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
ABCF1-201ENST00000326195 CDK11AQ9UQ88 783 aaPredicted RBP15.14■□□□□ 0.01
ABCF1-201ENST00000326195 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
ABCF1-201ENST00000326195 CDK13Q14004 1512 aaKnown RBP15.12■□□□□ 0.01
ABCF1-201ENST00000326195 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
ABCF1-201ENST00000326195 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
ABCF1-201ENST00000326195 ZNF644Q9H582 1327 aaPredicted RBP15.07■□□□□ 0
ABCF1-201ENST00000326195 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
ABCF1-201ENST00000326195 ARHGEF11O15085 1522 aa15.05■□□□□ -0
ABCF1-201ENST00000326195 UGGT2Q9NYU1 1516 aa15.05■□□□□ -0
ABCF1-201ENST00000326195 KIAA0556O60303 1618 aa15.04■□□□□ -0
ABCF1-201ENST00000326195 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
ABCF1-201ENST00000326195 SUPT16HQ9Y5B9 1047 aaKnown RBP15.04■□□□□ -0
ABCF1-201ENST00000326195 UACAQ9BZF9 1416 aa15.04■□□□□ -0
ABCF1-201ENST00000326195 PCF11O94913 1555 aaKnown RBP15.04■□□□□ -0
ABCF1-201ENST00000326195 CFDP1Q9UEE9 299 aaPredicted RBP15.03■□□□□ -0
ABCF1-201ENST00000326195 CASKIN1Q8WXD9 1431 aa15.01□□□□□ -0.01
ABCF1-201ENST00000326195 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
ABCF1-201ENST00000326195 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
ABCF1-201ENST00000326195 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
ABCF1-201ENST00000326195 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
ABCF1-201ENST00000326195 RRP7BPQ9NSQ0 103 aa14.98□□□□□ -0.01
ABCF1-201ENST00000326195 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
ABCF1-201ENST00000326195 ATP10BO94823 1461 aa14.97□□□□□ -0.01
ABCF1-201ENST00000326195 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
ABCF1-201ENST00000326195 PHLDB1Q86UU1 1377 aa14.96□□□□□ -0.02
ABCF1-201ENST00000326195 CCNB3Q8WWL7 1395 aa14.95□□□□□ -0.02
ABCF1-201ENST00000326195 PRKCSHP14314 528 aaPredicted RBP14.94□□□□□ -0.02
ABCF1-201ENST00000326195 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
ABCF1-201ENST00000326195 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
ABCF1-201ENST00000326195 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
ABCF1-201ENST00000326195 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
ABCF1-201ENST00000326195 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
ABCF1-201ENST00000326195 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
ABCF1-201ENST00000326195 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
ABCF1-201ENST00000326195 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
ABCF1-201ENST00000326195 ASXL2Q76L83 1435 aa14.87□□□□□ -0.03
ABCF1-201ENST00000326195 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
ABCF1-201ENST00000326195 TRIM52Q96A61 297 aa14.86□□□□□ -0.03
ABCF1-201ENST00000326195 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.036e-8■■■□□ 17.8
ABCF1-201ENST00000326195 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
ABCF1-201ENST00000326195 NCOA2Q15596 1464 aa14.86□□□□□ -0.03
ABCF1-201ENST00000326195 TIAM1Q13009 1591 aa14.85□□□□□ -0.03
ABCF1-201ENST00000326195 HECW1Q76N89 1606 aa14.83□□□□□ -0.03
ABCF1-201ENST00000326195 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms