RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 GOLGA3Q08378 1498 aa14.79□□□□□ -0.04
PPM1A-202ENST00000325658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.79□□□□□ -0.04
PPM1A-202ENST00000325658 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.04
PPM1A-202ENST00000325658 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
PPM1A-202ENST00000325658 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.75□□□□□ -0.05
PPM1A-202ENST00000325658 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
PPM1A-202ENST00000325658 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
PPM1A-202ENST00000325658 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
PPM1A-202ENST00000325658 DEKP35659 375 aaKnown RBP14.72□□□□□ -0.05
PPM1A-202ENST00000325658 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
PPM1A-202ENST00000325658 NACADO15069 1562 aa14.72□□□□□ -0.05
PPM1A-202ENST00000325658 MTUS2Q5JR59 1369 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.05
PPM1A-202ENST00000325658 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
PPM1A-202ENST00000325658 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
PPM1A-202ENST00000325658 ANO8Q9HCE9 1232 aaPredicted RBP14.68□□□□□ -0.06
PPM1A-202ENST00000325658 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
PPM1A-202ENST00000325658 B4GALNT3Q6L9W6 998 aa14.63□□□□□ -0.07
PPM1A-202ENST00000325658 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
PPM1A-202ENST00000325658 ARXQ96QS3 562 aa14.61□□□□□ -0.07
PPM1A-202ENST00000325658 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
PPM1A-202ENST00000325658 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
PPM1A-202ENST00000325658 EEA1Q15075 1411 aa14.59□□□□□ -0.07
PPM1A-202ENST00000325658 RAB3GAP2Q9H2M9 1393 aa14.58□□□□□ -0.08
PPM1A-202ENST00000325658 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
PPM1A-202ENST00000325658 FOXD1Q16676 465 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
PPM1A-202ENST00000325658 KIF21BO75037 1637 aa14.56□□□□□ -0.08
PPM1A-202ENST00000325658 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
PPM1A-202ENST00000325658 WDR97A6NE52 1622 aa14.53□□□□□ -0.08
PPM1A-202ENST00000325658 NEFMP07197 916 aa14.53□□□□□ -0.08
PPM1A-202ENST00000325658 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
PPM1A-202ENST00000325658 CUX2O14529 1486 aa14.52□□□□□ -0.08
PPM1A-202ENST00000325658 CCDC184Q52MB2 194 aa14.52□□□□□ -0.08
PPM1A-202ENST00000325658 CCNB3Q8WWL7 1395 aa14.51□□□□□ -0.09
PPM1A-202ENST00000325658 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
PPM1A-202ENST00000325658 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
PPM1A-202ENST00000325658 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
PPM1A-202ENST00000325658 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
PPM1A-202ENST00000325658 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
PPM1A-202ENST00000325658 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PPM1A-202ENST00000325658 IL27Q8NEV9 243 aa14.47□□□□□ -0.09
PPM1A-202ENST00000325658 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
PPM1A-202ENST00000325658 EIF4G2P78344 907 aaKnown RBP eCLIP14.45□□□□□ -0.1
PPM1A-202ENST00000325658 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
PPM1A-202ENST00000325658 PLEKHD1A6NEE1 506 aa14.44□□□□□ -0.1
PPM1A-202ENST00000325658 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
PPM1A-202ENST00000325658 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
PPM1A-202ENST00000325658 NAP1L5Q96NT1 182 aaPredicted RBP14.42□□□□□ -0.1
PPM1A-202ENST00000325658 NOP58Q9Y2X3 529 aaKnown RBP14.42□□□□□ -0.1
PPM1A-202ENST00000325658 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
PPM1A-202ENST00000325658 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
PPM1A-202ENST00000325658 LAS1LQ9Y4W2 734 aaKnown RBP14.41□□□□□ -0.1
PPM1A-202ENST00000325658 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
PPM1A-202ENST00000325658 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
PPM1A-202ENST00000325658 NPM1P06748 294 aaKnown RBP eCLIP14.37□□□□□ -0.11
PPM1A-202ENST00000325658 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
PPM1A-202ENST00000325658 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
PPM1A-202ENST00000325658 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
PPM1A-202ENST00000325658 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
PPM1A-202ENST00000325658 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
PPM1A-202ENST00000325658 ANP32BQ92688 251 aaKnown RBP14.32□□□□□ -0.12
PPM1A-202ENST00000325658 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
PPM1A-202ENST00000325658 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PPM1A-202ENST00000325658 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 PHLDB1Q86UU1 1377 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
PPM1A-202ENST00000325658 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
PPM1A-202ENST00000325658 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
PPM1A-202ENST00000325658 AMER1Q5JTC6 1135 aaPredicted RBP14.27□□□□□ -0.12
PPM1A-202ENST00000325658 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
PPM1A-202ENST00000325658 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
PPM1A-202ENST00000325658 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
PPM1A-202ENST00000325658 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
PPM1A-202ENST00000325658 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
PPM1A-202ENST00000325658 PPM1GO15355 546 aaPredicted RBP14.25□□□□□ -0.13
PPM1A-202ENST00000325658 ESF1Q9H501 851 aaKnown RBP14.25□□□□□ -0.13
PPM1A-202ENST00000325658 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
PPM1A-202ENST00000325658 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
PPM1A-202ENST00000325658 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
PPM1A-202ENST00000325658 PKD2Q13563 968 aa14.22□□□□□ -0.13
PPM1A-202ENST00000325658 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
PPM1A-202ENST00000325658 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.14
PPM1A-202ENST00000325658 WDR43Q15061 677 aaKnown RBP eCLIP14.2□□□□□ -0.14
PPM1A-202ENST00000325658 IPO9Q96P70 1041 aaKnown RBP14.2□□□□□ -0.14
PPM1A-202ENST00000325658 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
PPM1A-202ENST00000325658 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
PPM1A-202ENST00000325658 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
PPM1A-202ENST00000325658 L3MBTL2Q969R5 705 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms