RNA–Protein interactions for RNA: ENST00000325590.9

AMPH-201, Transcript of amphiphysin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AMPH, Length 3,145 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-201ENST00000325590 CLIP1P30622 1438 aa13.47□□□□□ -0.25
AMPH-201ENST00000325590 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
AMPH-201ENST00000325590 IGF1RP08069 1367 aa13.45□□□□□ -0.26
AMPH-201ENST00000325590 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
AMPH-201ENST00000325590 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
AMPH-201ENST00000325590 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
AMPH-201ENST00000325590 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
AMPH-201ENST00000325590 CARMIL1Q5VZK9 1371 aa13.38□□□□□ -0.27
AMPH-201ENST00000325590 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
AMPH-201ENST00000325590 CUL7Q14999 1698 aa13.38□□□□□ -0.27
AMPH-201ENST00000325590 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
AMPH-201ENST00000325590 BCANQ96GW7 911 aa13.35□□□□□ -0.27
AMPH-201ENST00000325590 TDRD9Q8NDG6 1382 aaKnown RBP13.33□□□□□ -0.28
AMPH-201ENST00000325590 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
AMPH-201ENST00000325590 ARHGAP35Q9NRY4 1499 aa13.32□□□□□ -0.28
AMPH-201ENST00000325590 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
AMPH-201ENST00000325590 WDR62O43379 1518 aa13.32□□□□□ -0.28
AMPH-201ENST00000325590 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
AMPH-201ENST00000325590 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
AMPH-201ENST00000325590 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
AMPH-201ENST00000325590 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
AMPH-201ENST00000325590 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
AMPH-201ENST00000325590 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
AMPH-201ENST00000325590 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
AMPH-201ENST00000325590 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
AMPH-201ENST00000325590 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
AMPH-201ENST00000325590 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
AMPH-201ENST00000325590 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
AMPH-201ENST00000325590 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
AMPH-201ENST00000325590 FKBP8Q14318 412 aa13.19□□□□□ -0.3
AMPH-201ENST00000325590 PCF11O94913 1555 aaKnown RBP13.18□□□□□ -0.3
AMPH-201ENST00000325590 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
AMPH-201ENST00000325590 EFCAB5A4FU69 1503 aa13.17□□□□□ -0.3
AMPH-201ENST00000325590 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
AMPH-201ENST00000325590 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
AMPH-201ENST00000325590 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
AMPH-201ENST00000325590 ITGAEP38570 1179 aa13.14□□□□□ -0.31
AMPH-201ENST00000325590 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
AMPH-201ENST00000325590 MSH5O43196 834 aa13.14□□□□□ -0.31
AMPH-201ENST00000325590 CFAP43Q8NDM7 1665 aa13.13□□□□□ -0.31
AMPH-201ENST00000325590 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
AMPH-201ENST00000325590 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
AMPH-201ENST00000325590 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
AMPH-201ENST00000325590 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
AMPH-201ENST00000325590 EIF5BO60841 1220 aaKnown RBP13.11□□□□□ -0.31
AMPH-201ENST00000325590 LRRIQ1Q96JM4 1722 aa13.1□□□□□ -0.31
AMPH-201ENST00000325590 IQGAP2Q13576 1575 aa13.09□□□□□ -0.31
AMPH-201ENST00000325590 MAP3K1Q13233 1512 aa13.08□□□□□ -0.32
AMPH-201ENST00000325590 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
AMPH-201ENST00000325590 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
AMPH-201ENST00000325590 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
AMPH-201ENST00000325590 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
AMPH-201ENST00000325590 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.32
AMPH-201ENST00000325590 FMN1Q68DA7 1419 aa13.02□□□□□ -0.32
AMPH-201ENST00000325590 NEFLP07196 543 aa13.02□□□□□ -0.33
AMPH-201ENST00000325590 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
AMPH-201ENST00000325590 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
AMPH-201ENST00000325590 CEP170Q5SW79 1584 aa13□□□□□ -0.33
AMPH-201ENST00000325590 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
AMPH-201ENST00000325590 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
AMPH-201ENST00000325590 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
AMPH-201ENST00000325590 KIAA0586Q9BVV6 1533 aa12.97□□□□□ -0.33
AMPH-201ENST00000325590 KIAA0556O60303 1618 aa12.97□□□□□ -0.33
AMPH-201ENST00000325590 DEKP35659 375 aaKnown RBP12.96□□□□□ -0.33
AMPH-201ENST00000325590 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.33
AMPH-201ENST00000325590 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
AMPH-201ENST00000325590 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
AMPH-201ENST00000325590 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
AMPH-201ENST00000325590 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
AMPH-201ENST00000325590 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
AMPH-201ENST00000325590 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
AMPH-201ENST00000325590 CHD1O14646 1710 aa12.92□□□□□ -0.34
AMPH-201ENST00000325590 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
AMPH-201ENST00000325590 NUP160Q12769 1436 aa12.91□□□□□ -0.34
AMPH-201ENST00000325590 CHMP7Q8WUX9 453 aaPredicted RBP12.91□□□□□ -0.34
AMPH-201ENST00000325590 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
AMPH-201ENST00000325590 FBLN2P98095 1184 aa12.89□□□□□ -0.35
AMPH-201ENST00000325590 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
AMPH-201ENST00000325590 CDK13Q14004 1512 aaKnown RBP12.88□□□□□ -0.35
AMPH-201ENST00000325590 SUPT6HQ7KZ85 1726 aaKnown RBP12.88□□□□□ -0.35
AMPH-201ENST00000325590 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
AMPH-201ENST00000325590 CCDC18Q5T9S5 1454 aa12.87□□□□□ -0.35
AMPH-201ENST00000325590 EPRSP07814 1512 aaKnown RBP12.87□□□□□ -0.35
AMPH-201ENST00000325590 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
AMPH-201ENST00000325590 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
AMPH-201ENST00000325590 RAPGEF6Q8TEU7 1601 aa12.86□□□□□ -0.35
AMPH-201ENST00000325590 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
AMPH-201ENST00000325590 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
AMPH-201ENST00000325590 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
AMPH-201ENST00000325590 NBR1Q14596 966 aa12.84□□□□□ -0.35
AMPH-201ENST00000325590 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
AMPH-201ENST00000325590 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
AMPH-201ENST00000325590 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
AMPH-201ENST00000325590 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
AMPH-201ENST00000325590 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
AMPH-201ENST00000325590 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
AMPH-201ENST00000325590 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
AMPH-201ENST00000325590 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
AMPH-201ENST00000325590 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
AMPH-201ENST00000325590 MAPKBP1O60336 1514 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms