RNA–Protein interactions for RNA: ENST00000323817.7

CDK19-201, Transcript of cyclin dependent kinase 19, humanhuman

TSL 1 (best) BASIC

Gene CDK19, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK19-201ENST00000323817 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
CDK19-201ENST00000323817 CEP162Q5TB80 1403 aa12.09□□□□□ -0.47
CDK19-201ENST00000323817 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
CDK19-201ENST00000323817 CUX2O14529 1486 aa12.07□□□□□ -0.48
CDK19-201ENST00000323817 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
CDK19-201ENST00000323817 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
CDK19-201ENST00000323817 MRC2Q9UBG0 1479 aa12.06□□□□□ -0.48
CDK19-201ENST00000323817 CUL7Q14999 1698 aa12.03□□□□□ -0.48
CDK19-201ENST00000323817 BCL11AQ9H165 835 aa12.03□□□□□ -0.48
CDK19-201ENST00000323817 PBRM1Q86U86 1689 aa11.98□□□□□ -0.49
CDK19-201ENST00000323817 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
CDK19-201ENST00000323817 CARMIL1Q5VZK9 1371 aa11.95□□□□□ -0.5
CDK19-201ENST00000323817 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
CDK19-201ENST00000323817 GAPVD1Q14C86 1478 aa11.93□□□□□ -0.5
CDK19-201ENST00000323817 CLIP1P30622 1438 aa11.93□□□□□ -0.5
CDK19-201ENST00000323817 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
CDK19-201ENST00000323817 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
CDK19-201ENST00000323817 ARHGAP35Q9NRY4 1499 aa11.92□□□□□ -0.5
CDK19-201ENST00000323817 ADAMTS12P58397 1594 aa11.91□□□□□ -0.5
CDK19-201ENST00000323817 VPS8Q8N3P4 1428 aa11.91□□□□□ -0.5
CDK19-201ENST00000323817 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.5
CDK19-201ENST00000323817 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.51
CDK19-201ENST00000323817 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
CDK19-201ENST00000323817 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
CDK19-201ENST00000323817 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
CDK19-201ENST00000323817 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
CDK19-201ENST00000323817 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
CDK19-201ENST00000323817 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.517e-7■□□□□ 11.1
CDK19-201ENST00000323817 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
CDK19-201ENST00000323817 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
CDK19-201ENST00000323817 NEFMP07197 916 aa11.83□□□□□ -0.52
CDK19-201ENST00000323817 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
CDK19-201ENST00000323817 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
CDK19-201ENST00000323817 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
CDK19-201ENST00000323817 BCANQ96GW7 911 aa11.81□□□□□ -0.52
CDK19-201ENST00000323817 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
CDK19-201ENST00000323817 TRIM44Q96DX7 344 aaPredicted RBP11.8□□□□□ -0.52
CDK19-201ENST00000323817 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
CDK19-201ENST00000323817 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CDK19-201ENST00000323817 LRRIQ1Q96JM4 1722 aa11.78□□□□□ -0.52
CDK19-201ENST00000323817 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
CDK19-201ENST00000323817 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
CDK19-201ENST00000323817 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
CDK19-201ENST00000323817 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
CDK19-201ENST00000323817 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
CDK19-201ENST00000323817 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
CDK19-201ENST00000323817 ARXQ96QS3 562 aa11.73□□□□□ -0.53
CDK19-201ENST00000323817 PCF11O94913 1555 aaKnown RBP11.73□□□□□ -0.53
CDK19-201ENST00000323817 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
CDK19-201ENST00000323817 IQGAP2Q13576 1575 aa11.73□□□□□ -0.53
CDK19-201ENST00000323817 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
CDK19-201ENST00000323817 TIAM1Q13009 1591 aa11.72□□□□□ -0.53
CDK19-201ENST00000323817 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
CDK19-201ENST00000323817 NUP160Q12769 1436 aa11.7□□□□□ -0.54
CDK19-201ENST00000323817 UPF2Q9HAU5 1272 aaKnown RBP11.69□□□□□ -0.54
CDK19-201ENST00000323817 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
CDK19-201ENST00000323817 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
CDK19-201ENST00000323817 DISP1Q96F81 1524 aa11.68□□□□□ -0.54
CDK19-201ENST00000323817 CASKIN1Q8WXD9 1431 aa11.68□□□□□ -0.54
CDK19-201ENST00000323817 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
CDK19-201ENST00000323817 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
CDK19-201ENST00000323817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
CDK19-201ENST00000323817 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
CDK19-201ENST00000323817 ITGAEP38570 1179 aa11.66□□□□□ -0.54
CDK19-201ENST00000323817 KIAA0556O60303 1618 aa11.65□□□□□ -0.54
CDK19-201ENST00000323817 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
CDK19-201ENST00000323817 PPARGC1BQ86YN6 1023 aaKnown RBP11.64□□□□□ -0.55
CDK19-201ENST00000323817 KANK4Q5T7N3 995 aaPredicted RBP11.64□□□□□ -0.55
CDK19-201ENST00000323817 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
CDK19-201ENST00000323817 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
CDK19-201ENST00000323817 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
CDK19-201ENST00000323817 HRCP23327 699 aa11.62□□□□□ -0.55
CDK19-201ENST00000323817 CHD1O14646 1710 aa11.62□□□□□ -0.55
CDK19-201ENST00000323817 NCLP19338 710 aaKnown RBP11.61□□□□□ -0.55
CDK19-201ENST00000323817 FMN1Q68DA7 1419 aa11.61□□□□□ -0.55
CDK19-201ENST00000323817 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
CDK19-201ENST00000323817 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
CDK19-201ENST00000323817 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
CDK19-201ENST00000323817 MAGI3Q5TCQ9 1506 aa11.59□□□□□ -0.55
CDK19-201ENST00000323817 PTMAP06454 111 aaKnown RBP11.55□□□□□ -0.56
CDK19-201ENST00000323817 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
CDK19-201ENST00000323817 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
CDK19-201ENST00000323817 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
CDK19-201ENST00000323817 NBR1Q14596 966 aa11.53□□□□□ -0.56
CDK19-201ENST00000323817 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
CDK19-201ENST00000323817 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.56
CDK19-201ENST00000323817 PHLDB1Q86UU1 1377 aa11.52□□□□□ -0.57
CDK19-201ENST00000323817 NUP153P49790 1475 aaKnown RBP11.52□□□□□ -0.57
CDK19-201ENST00000323817 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
CDK19-201ENST00000323817 ABCA8O94911 1581 aa11.52□□□□□ -0.57
CDK19-201ENST00000323817 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
CDK19-201ENST00000323817 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
CDK19-201ENST00000323817 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
CDK19-201ENST00000323817 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
CDK19-201ENST00000323817 EHBP1L1Q8N3D4 1523 aa11.49□□□□□ -0.57
CDK19-201ENST00000323817 NAP1L5Q96NT1 182 aaPredicted RBP11.49□□□□□ -0.57
CDK19-201ENST00000323817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.573e-8■■■□□ 16.9
CDK19-201ENST00000323817 ADCY10Q96PN6 1610 aa11.47□□□□□ -0.57
CDK19-201ENST00000323817 SUPT6HQ7KZ85 1726 aaKnown RBP11.47□□□□□ -0.57
CDK19-201ENST00000323817 DIEXFQ68CQ4 756 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms