RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 MIER1Q8N108 512 aa18.34■□□□□ 0.53
SEC24A-201ENST00000322887 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
SEC24A-201ENST00000322887 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
SEC24A-201ENST00000322887 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
SEC24A-201ENST00000322887 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
SEC24A-201ENST00000322887 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
SEC24A-201ENST00000322887 ZNF316A6NFI3 1004 aaPredicted RBP18.29■□□□□ 0.52
SEC24A-201ENST00000322887 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
SEC24A-201ENST00000322887 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
SEC24A-201ENST00000322887 UBTFP17480 764 aaKnown RBP18.29■□□□□ 0.52
SEC24A-201ENST00000322887 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
SEC24A-201ENST00000322887 KIF21BO75037 1637 aa18.27■□□□□ 0.51
SEC24A-201ENST00000322887 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
SEC24A-201ENST00000322887 RAPGEF2Q9Y4G8 1499 aa18.25■□□□□ 0.51
SEC24A-201ENST00000322887 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
SEC24A-201ENST00000322887 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SEC24A-201ENST00000322887 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
SEC24A-201ENST00000322887 NUP160Q12769 1436 aa18.13■□□□□ 0.49
SEC24A-201ENST00000322887 CHD1O14646 1710 aa18.12■□□□□ 0.49
SEC24A-201ENST00000322887 FBLN2P98095 1184 aa18.07■□□□□ 0.48
SEC24A-201ENST00000322887 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
SEC24A-201ENST00000322887 KIAA0586Q9BVV6 1533 aa18.06■□□□□ 0.48
SEC24A-201ENST00000322887 TNIKQ9UKE5 1360 aa18.05■□□□□ 0.48
SEC24A-201ENST00000322887 CTTNBP2Q8WZ74 1663 aa18.02■□□□□ 0.48
SEC24A-201ENST00000322887 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
SEC24A-201ENST00000322887 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
SEC24A-201ENST00000322887 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
SEC24A-201ENST00000322887 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
SEC24A-201ENST00000322887 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
SEC24A-201ENST00000322887 JPH4Q96JJ6 628 aa17.89■□□□□ 0.45
SEC24A-201ENST00000322887 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
SEC24A-201ENST00000322887 MYT1Q01538 1121 aa17.86■□□□□ 0.45
SEC24A-201ENST00000322887 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
SEC24A-201ENST00000322887 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
SEC24A-201ENST00000322887 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
SEC24A-201ENST00000322887 DISP1Q96F81 1524 aa17.83■□□□□ 0.45
SEC24A-201ENST00000322887 CLIP1P30622 1438 aa17.83■□□□□ 0.44
SEC24A-201ENST00000322887 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.44
SEC24A-201ENST00000322887 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
SEC24A-201ENST00000322887 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
SEC24A-201ENST00000322887 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
SEC24A-201ENST00000322887 APLP2Q06481 763 aa17.8■□□□□ 0.44
SEC24A-201ENST00000322887 BCANQ96GW7 911 aa17.79■□□□□ 0.44
SEC24A-201ENST00000322887 ITGAEP38570 1179 aa17.77■□□□□ 0.44
SEC24A-201ENST00000322887 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
SEC24A-201ENST00000322887 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
SEC24A-201ENST00000322887 ARHGEF11O15085 1522 aa17.71■□□□□ 0.43
SEC24A-201ENST00000322887 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
SEC24A-201ENST00000322887 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
SEC24A-201ENST00000322887 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
SEC24A-201ENST00000322887 DHX57Q6P158 1386 aaKnown RBP17.7■□□□□ 0.42
SEC24A-201ENST00000322887 FMN1Q68DA7 1419 aa17.7■□□□□ 0.42
SEC24A-201ENST00000322887 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
SEC24A-201ENST00000322887 PTPRGP23470 1445 aa17.67■□□□□ 0.42
SEC24A-201ENST00000322887 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
SEC24A-201ENST00000322887 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
SEC24A-201ENST00000322887 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
SEC24A-201ENST00000322887 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
SEC24A-201ENST00000322887 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
SEC24A-201ENST00000322887 ABCA8O94911 1581 aa17.61■□□□□ 0.41
SEC24A-201ENST00000322887 CASKIN1Q8WXD9 1431 aa17.6■□□□□ 0.41
SEC24A-201ENST00000322887 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
SEC24A-201ENST00000322887 UHRF1BP1LA0JNW5 1464 aa17.6■□□□□ 0.41
SEC24A-201ENST00000322887 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
SEC24A-201ENST00000322887 FYCO1Q9BQS8 1478 aa17.59■□□□□ 0.41
SEC24A-201ENST00000322887 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
SEC24A-201ENST00000322887 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
SEC24A-201ENST00000322887 ABCC2Q92887 1545 aa17.55■□□□□ 0.4
SEC24A-201ENST00000322887 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
SEC24A-201ENST00000322887 PCF11O94913 1555 aaKnown RBP17.54■□□□□ 0.4
SEC24A-201ENST00000322887 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.39
SEC24A-201ENST00000322887 MAP3K1Q13233 1512 aa17.51■□□□□ 0.39
SEC24A-201ENST00000322887 FKBP8Q14318 412 aa17.51■□□□□ 0.39
SEC24A-201ENST00000322887 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
SEC24A-201ENST00000322887 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
SEC24A-201ENST00000322887 KDM5BQ9UGL1 1544 aa17.49■□□□□ 0.39
SEC24A-201ENST00000322887 ADCY10Q96PN6 1610 aa17.49■□□□□ 0.39
SEC24A-201ENST00000322887 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
SEC24A-201ENST00000322887 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
SEC24A-201ENST00000322887 EPRSP07814 1512 aaKnown RBP17.47■□□□□ 0.39
SEC24A-201ENST00000322887 CYB5RLQ6IPT4 315 aa17.46■□□□□ 0.39
SEC24A-201ENST00000322887 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
SEC24A-201ENST00000322887 ATP10BO94823 1461 aa17.44■□□□□ 0.38
SEC24A-201ENST00000322887 CFAP43Q8NDM7 1665 aa17.41■□□□□ 0.38
SEC24A-201ENST00000322887 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
SEC24A-201ENST00000322887 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
SEC24A-201ENST00000322887 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
SEC24A-201ENST00000322887 CDK11AQ9UQ88 783 aaPredicted RBP17.38■□□□□ 0.37
SEC24A-201ENST00000322887 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
SEC24A-201ENST00000322887 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
SEC24A-201ENST00000322887 BCL11AQ9H165 835 aa17.37■□□□□ 0.37
SEC24A-201ENST00000322887 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
SEC24A-201ENST00000322887 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
SEC24A-201ENST00000322887 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
SEC24A-201ENST00000322887 CLSPNQ9HAW4 1339 aa17.36■□□□□ 0.37
SEC24A-201ENST00000322887 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
SEC24A-201ENST00000322887 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
SEC24A-201ENST00000322887 EHBP1L1Q8N3D4 1523 aa17.32■□□□□ 0.36
SEC24A-201ENST00000322887 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
SEC24A-201ENST00000322887 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms