RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 RANGAP1P46060 587 aaPredicted RBP11.08□□□□□ -0.64
RTL3-201ENST00000321110 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
RTL3-201ENST00000321110 ANP32CO43423 234 aa11.07□□□□□ -0.64
RTL3-201ENST00000321110 KANK4Q5T7N3 995 aaPredicted RBP11.07□□□□□ -0.64
RTL3-201ENST00000321110 UBE2Q2Q8WVN8 375 aa11.07□□□□□ -0.64
RTL3-201ENST00000321110 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
RTL3-201ENST00000321110 HIRIP3Q9BW71 556 aaPredicted RBP11.06□□□□□ -0.64
RTL3-201ENST00000321110 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
RTL3-201ENST00000321110 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.05□□□□□ -0.64
RTL3-201ENST00000321110 SYNJ1O43426 1573 aa11.05□□□□□ -0.64
RTL3-201ENST00000321110 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
RTL3-201ENST00000321110 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
RTL3-201ENST00000321110 PPP4R2Q9NY27 417 aa11.04□□□□□ -0.64
RTL3-201ENST00000321110 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.65
RTL3-201ENST00000321110 RAB3GAP2Q9H2M9 1393 aa11.02□□□□□ -0.65
RTL3-201ENST00000321110 SIN3AQ96ST3 1273 aa11.01□□□□□ -0.65
RTL3-201ENST00000321110 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
RTL3-201ENST00000321110 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
RTL3-201ENST00000321110 RTL5Q5HYW3 569 aaPredicted RBP10.98□□□□□ -0.65
RTL3-201ENST00000321110 ARAP1Q96P48 1450 aa10.98□□□□□ -0.65
RTL3-201ENST00000321110 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
RTL3-201ENST00000321110 IPO9Q96P70 1041 aaKnown RBP10.95□□□□□ -0.66
RTL3-201ENST00000321110 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
RTL3-201ENST00000321110 WASHC2AQ641Q2 1341 aa10.93□□□□□ -0.66
RTL3-201ENST00000321110 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
RTL3-201ENST00000321110 ANP32AP39687 249 aaKnown RBP10.91□□□□□ -0.66
RTL3-201ENST00000321110 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
RTL3-201ENST00000321110 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
RTL3-201ENST00000321110 TIMELESSQ9UNS1 1208 aa10.9□□□□□ -0.66
RTL3-201ENST00000321110 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
RTL3-201ENST00000321110 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
RTL3-201ENST00000321110 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
RTL3-201ENST00000321110 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
RTL3-201ENST00000321110 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
RTL3-201ENST00000321110 ERICH3Q5RHP9 1530 aa10.85□□□□□ -0.67
RTL3-201ENST00000321110 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
RTL3-201ENST00000321110 EIF5BO60841 1220 aaKnown RBP10.83□□□□□ -0.68
RTL3-201ENST00000321110 NEFMP07197 916 aa10.83□□□□□ -0.68
RTL3-201ENST00000321110 LAS1LQ9Y4W2 734 aaKnown RBP10.82□□□□□ -0.68
RTL3-201ENST00000321110 NCAPD3P42695 1498 aa10.82□□□□□ -0.68
RTL3-201ENST00000321110 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
RTL3-201ENST00000321110 ZBED9Q6R2W3 1325 aa10.81□□□□□ -0.68
RTL3-201ENST00000321110 USP35Q9P2H5 1018 aa10.8□□□□□ -0.68
RTL3-201ENST00000321110 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
RTL3-201ENST00000321110 FAM9BQ8IZU0 186 aa10.78□□□□□ -0.68
RTL3-201ENST00000321110 TONSLQ96HA7 1378 aa10.78□□□□□ -0.68
RTL3-201ENST00000321110 AKNAQ7Z591 1439 aa10.77□□□□□ -0.68
RTL3-201ENST00000321110 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.69
RTL3-201ENST00000321110 PHLDB1Q86UU1 1377 aa10.77□□□□□ -0.69
RTL3-201ENST00000321110 PKNOX2Q96KN3 472 aa10.77□□□□□ -0.69
RTL3-201ENST00000321110 CUX1P39880 1505 aa10.77□□□□□ -0.69
RTL3-201ENST00000321110 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
RTL3-201ENST00000321110 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
RTL3-201ENST00000321110 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
RTL3-201ENST00000321110 MRS2Q9HD23 443 aa10.74□□□□□ -0.69
RTL3-201ENST00000321110 RNF123Q5XPI4 1314 aa10.74□□□□□ -0.69
RTL3-201ENST00000321110 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
RTL3-201ENST00000321110 KIF27Q86VH2 1401 aa10.73□□□□□ -0.69
RTL3-201ENST00000321110 PRKRIP1Q9H875 184 aaPredicted RBP10.73□□□□□ -0.69
RTL3-201ENST00000321110 KDM5BQ9UGL1 1544 aa10.72□□□□□ -0.69
RTL3-201ENST00000321110 GSE1Q14687 1217 aa10.72□□□□□ -0.69
RTL3-201ENST00000321110 SMG6Q86US8 1419 aaKnown RBP10.72□□□□□ -0.69
RTL3-201ENST00000321110 CNTLNQ9NXG0 1405 aa10.72□□□□□ -0.69
RTL3-201ENST00000321110 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
RTL3-201ENST00000321110 HSPA5P11021 654 aaKnown RBP10.72□□□□□ -0.69
RTL3-201ENST00000321110 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
RTL3-201ENST00000321110 LRRC9Q6ZRR7 1453 aa10.71□□□□□ -0.7
RTL3-201ENST00000321110 MAP3K1Q13233 1512 aa10.7□□□□□ -0.7
RTL3-201ENST00000321110 PRDM2Q13029 1718 aa10.69□□□□□ -0.7
RTL3-201ENST00000321110 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
RTL3-201ENST00000321110 CFTRP13569 1480 aa10.69□□□□□ -0.7
RTL3-201ENST00000321110 NUDCQ9Y266 331 aa10.69□□□□□ -0.7
RTL3-201ENST00000321110 PDE4AP27815 886 aa10.68□□□□□ -0.7
RTL3-201ENST00000321110 FRAT1Q92837 279 aaPredicted RBP10.68□□□□□ -0.7
RTL3-201ENST00000321110 BACH2Q9BYV9 841 aa10.66□□□□□ -0.7
RTL3-201ENST00000321110 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
RTL3-201ENST00000321110 TCERG1O14776 1098 aaKnown RBP10.65□□□□□ -0.7
RTL3-201ENST00000321110 NESP48681 1621 aa10.64□□□□□ -0.71
RTL3-201ENST00000321110 FAM43AQ8N2R8 423 aa10.64□□□□□ -0.71
RTL3-201ENST00000321110 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
RTL3-201ENST00000321110 CCDC7Q96M83 1385 aa10.63□□□□□ -0.71
RTL3-201ENST00000321110 UACAQ9BZF9 1416 aa10.63□□□□□ -0.71
RTL3-201ENST00000321110 EIF4G2P78344 907 aaKnown RBP eCLIP10.63□□□□□ -0.71
RTL3-201ENST00000321110 NCOA1Q15788 1441 aa10.62□□□□□ -0.71
RTL3-201ENST00000321110 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
RTL3-201ENST00000321110 DCAF11Q8TEB1 546 aa10.62□□□□□ -0.71
RTL3-201ENST00000321110 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTL3-201ENST00000321110 SLC24A1O60721 1099 aa10.6□□□□□ -0.71
RTL3-201ENST00000321110 MS4A1P11836 297 aa10.6□□□□□ -0.71
RTL3-201ENST00000321110 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
RTL3-201ENST00000321110 ZMYND15Q9H091 742 aa10.6□□□□□ -0.71
RTL3-201ENST00000321110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTL3-201ENST00000321110 SLC4A3P48751 1232 aa10.59□□□□□ -0.71
RTL3-201ENST00000321110 IGF1RP08069 1367 aa10.58□□□□□ -0.72
RTL3-201ENST00000321110 PTPRKQ15262 1439 aa10.58□□□□□ -0.72
RTL3-201ENST00000321110 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
RTL3-201ENST00000321110 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
RTL3-201ENST00000321110 HFM1A2PYH4 1435 aa10.57□□□□□ -0.72
RTL3-201ENST00000321110 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
RTL3-201ENST00000321110 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms