RNA–Protein interactions for RNA: ENST00000320246.9

NEK6-201, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-201ENST00000320246 NESP48681 1621 aa16.42■□□□□ 0.22
NEK6-201ENST00000320246 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
NEK6-201ENST00000320246 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
NEK6-201ENST00000320246 CHIC2Q9UKJ5 165 aa16.39■□□□□ 0.22
NEK6-201ENST00000320246 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
NEK6-201ENST00000320246 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
NEK6-201ENST00000320246 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
NEK6-201ENST00000320246 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
NEK6-201ENST00000320246 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
NEK6-201ENST00000320246 FKBP8Q14318 412 aa16.31■□□□□ 0.2
NEK6-201ENST00000320246 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
NEK6-201ENST00000320246 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
NEK6-201ENST00000320246 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
NEK6-201ENST00000320246 IRX6P78412 446 aaPredicted RBP16.27■□□□□ 0.2
NEK6-201ENST00000320246 NEFLP07196 543 aa16.26■□□□□ 0.19
NEK6-201ENST00000320246 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
NEK6-201ENST00000320246 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
NEK6-201ENST00000320246 ZNF326Q5BKZ1 582 aaKnown RBP16.23■□□□□ 0.19
NEK6-201ENST00000320246 FBLN2P98095 1184 aa16.23■□□□□ 0.19
NEK6-201ENST00000320246 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
NEK6-201ENST00000320246 MYT1Q01538 1121 aa16.2■□□□□ 0.18
NEK6-201ENST00000320246 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
NEK6-201ENST00000320246 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
NEK6-201ENST00000320246 FOXD1Q16676 465 aa16.19■□□□□ 0.18
NEK6-201ENST00000320246 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
NEK6-201ENST00000320246 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
NEK6-201ENST00000320246 RAB3GAP2Q9H2M9 1393 aa16.16■□□□□ 0.18
NEK6-201ENST00000320246 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
NEK6-201ENST00000320246 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
NEK6-201ENST00000320246 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
NEK6-201ENST00000320246 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
NEK6-201ENST00000320246 ANP32CO43423 234 aa16.12■□□□□ 0.17
NEK6-201ENST00000320246 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
NEK6-201ENST00000320246 TSHZ2Q9NRE2 1034 aa16.12■□□□□ 0.17
NEK6-201ENST00000320246 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
NEK6-201ENST00000320246 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
NEK6-201ENST00000320246 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
NEK6-201ENST00000320246 PDS5BQ9NTI5 1447 aa16.08■□□□□ 0.16
NEK6-201ENST00000320246 CUL7Q14999 1698 aa16.08■□□□□ 0.16
NEK6-201ENST00000320246 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
NEK6-201ENST00000320246 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
NEK6-201ENST00000320246 MAP3K1Q13233 1512 aa16.06■□□□□ 0.16
NEK6-201ENST00000320246 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
NEK6-201ENST00000320246 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
NEK6-201ENST00000320246 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
NEK6-201ENST00000320246 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK6-201ENST00000320246 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
NEK6-201ENST00000320246 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
NEK6-201ENST00000320246 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.15
NEK6-201ENST00000320246 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
NEK6-201ENST00000320246 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
NEK6-201ENST00000320246 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
NEK6-201ENST00000320246 FAM9BQ8IZU0 186 aa16■□□□□ 0.15
NEK6-201ENST00000320246 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
NEK6-201ENST00000320246 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
NEK6-201ENST00000320246 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
NEK6-201ENST00000320246 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
NEK6-201ENST00000320246 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
NEK6-201ENST00000320246 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
NEK6-201ENST00000320246 AQRO60306 1485 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■□□□□ 10.1
NEK6-201ENST00000320246 SETD5Q9C0A6 1442 aa15.94■□□□□ 0.14
NEK6-201ENST00000320246 MAPKBP1O60336 1514 aa15.92■□□□□ 0.14
NEK6-201ENST00000320246 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
NEK6-201ENST00000320246 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
NEK6-201ENST00000320246 LRRIQ1Q96JM4 1722 aa15.88■□□□□ 0.13
NEK6-201ENST00000320246 KDM2AQ9Y2K7 1162 aa15.87■□□□□ 0.13
NEK6-201ENST00000320246 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
NEK6-201ENST00000320246 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
NEK6-201ENST00000320246 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
NEK6-201ENST00000320246 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
NEK6-201ENST00000320246 PPP1R15AO75807 674 aaPredicted RBP15.85■□□□□ 0.13
NEK6-201ENST00000320246 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
NEK6-201ENST00000320246 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
NEK6-201ENST00000320246 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
NEK6-201ENST00000320246 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
NEK6-201ENST00000320246 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
NEK6-201ENST00000320246 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
NEK6-201ENST00000320246 CDK11AQ9UQ88 783 aaPredicted RBP15.81■□□□□ 0.12
NEK6-201ENST00000320246 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
NEK6-201ENST00000320246 CCDC184Q52MB2 194 aa15.8■□□□□ 0.12
NEK6-201ENST00000320246 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
NEK6-201ENST00000320246 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
NEK6-201ENST00000320246 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
NEK6-201ENST00000320246 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
NEK6-201ENST00000320246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.77■□□□□ 0.121e-7■■■■■ 59.4
NEK6-201ENST00000320246 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
NEK6-201ENST00000320246 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
NEK6-201ENST00000320246 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
NEK6-201ENST00000320246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.112e-8■□□□□ 10.5
NEK6-201ENST00000320246 CDK13Q14004 1512 aaKnown RBP15.74■□□□□ 0.11
NEK6-201ENST00000320246 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
NEK6-201ENST00000320246 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
NEK6-201ENST00000320246 SUPT6HQ7KZ85 1726 aaKnown RBP15.73■□□□□ 0.11
NEK6-201ENST00000320246 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
NEK6-201ENST00000320246 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
NEK6-201ENST00000320246 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
NEK6-201ENST00000320246 RGL3Q3MIN7 710 aa15.72■□□□□ 0.11
NEK6-201ENST00000320246 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
NEK6-201ENST00000320246 WDR62O43379 1518 aa15.71■□□□□ 0.11
NEK6-201ENST00000320246 EPRSP07814 1512 aaKnown RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms