RNA–Protein interactions for RNA: ENST00000319167.12

TRO-202, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRO, Length 2,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-202ENST00000319167 RAB3GAP2Q9H2M9 1393 aa19.02■□□□□ 0.64
TRO-202ENST00000319167 NESP48681 1621 aa19.01■□□□□ 0.63
TRO-202ENST00000319167 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
TRO-202ENST00000319167 PHLDB1Q86UU1 1377 aa18.99■□□□□ 0.63
TRO-202ENST00000319167 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
TRO-202ENST00000319167 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
TRO-202ENST00000319167 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
TRO-202ENST00000319167 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
TRO-202ENST00000319167 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
TRO-202ENST00000319167 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
TRO-202ENST00000319167 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
TRO-202ENST00000319167 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
TRO-202ENST00000319167 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
TRO-202ENST00000319167 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
TRO-202ENST00000319167 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
TRO-202ENST00000319167 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
TRO-202ENST00000319167 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
TRO-202ENST00000319167 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
TRO-202ENST00000319167 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
TRO-202ENST00000319167 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
TRO-202ENST00000319167 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
TRO-202ENST00000319167 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
TRO-202ENST00000319167 CUL7Q14999 1698 aa18.78■□□□□ 0.6
TRO-202ENST00000319167 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
TRO-202ENST00000319167 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
TRO-202ENST00000319167 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRO-202ENST00000319167 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
TRO-202ENST00000319167 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
TRO-202ENST00000319167 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
TRO-202ENST00000319167 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
TRO-202ENST00000319167 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
TRO-202ENST00000319167 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
TRO-202ENST00000319167 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
TRO-202ENST00000319167 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
TRO-202ENST00000319167 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
TRO-202ENST00000319167 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
TRO-202ENST00000319167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRO-202ENST00000319167 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
TRO-202ENST00000319167 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.58
TRO-202ENST00000319167 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
TRO-202ENST00000319167 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
TRO-202ENST00000319167 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
TRO-202ENST00000319167 SUPT16HQ9Y5B9 1047 aaKnown RBP18.6■□□□□ 0.57
TRO-202ENST00000319167 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
TRO-202ENST00000319167 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
TRO-202ENST00000319167 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
TRO-202ENST00000319167 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
TRO-202ENST00000319167 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
TRO-202ENST00000319167 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
TRO-202ENST00000319167 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
TRO-202ENST00000319167 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
TRO-202ENST00000319167 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
TRO-202ENST00000319167 LRRIQ1Q96JM4 1722 aa18.56■□□□□ 0.56
TRO-202ENST00000319167 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
TRO-202ENST00000319167 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
TRO-202ENST00000319167 NAIPQ13075 1403 aa18.53■□□□□ 0.56
TRO-202ENST00000319167 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
TRO-202ENST00000319167 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
TRO-202ENST00000319167 MAGI3Q5TCQ9 1506 aa18.5■□□□□ 0.55
TRO-202ENST00000319167 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
TRO-202ENST00000319167 SUPT6HQ7KZ85 1726 aaKnown RBP18.5■□□□□ 0.55
TRO-202ENST00000319167 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
TRO-202ENST00000319167 ANP32CO43423 234 aa18.47■□□□□ 0.55
TRO-202ENST00000319167 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
TRO-202ENST00000319167 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
TRO-202ENST00000319167 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
TRO-202ENST00000319167 IQGAP2Q13576 1575 aa18.41■□□□□ 0.54
TRO-202ENST00000319167 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
TRO-202ENST00000319167 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
TRO-202ENST00000319167 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
TRO-202ENST00000319167 BCANQ96GW7 911 aa18.39■□□□□ 0.53
TRO-202ENST00000319167 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
TRO-202ENST00000319167 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
TRO-202ENST00000319167 FOXD1Q16676 465 aa18.38■□□□□ 0.53
TRO-202ENST00000319167 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
TRO-202ENST00000319167 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
TRO-202ENST00000319167 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
TRO-202ENST00000319167 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
TRO-202ENST00000319167 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
TRO-202ENST00000319167 FKBP8Q14318 412 aa18.35■□□□□ 0.53
TRO-202ENST00000319167 KDM6BO15054 1643 aa18.32■□□□□ 0.52
TRO-202ENST00000319167 WDR62O43379 1518 aa18.31■□□□□ 0.52
TRO-202ENST00000319167 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
TRO-202ENST00000319167 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
TRO-202ENST00000319167 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
TRO-202ENST00000319167 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
TRO-202ENST00000319167 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
TRO-202ENST00000319167 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
TRO-202ENST00000319167 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
TRO-202ENST00000319167 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
TRO-202ENST00000319167 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
TRO-202ENST00000319167 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
TRO-202ENST00000319167 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRO-202ENST00000319167 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
TRO-202ENST00000319167 FBLN2P98095 1184 aa18.24■□□□□ 0.51
TRO-202ENST00000319167 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
TRO-202ENST00000319167 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
TRO-202ENST00000319167 NEFLP07196 543 aa18.24■□□□□ 0.51
TRO-202ENST00000319167 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
TRO-202ENST00000319167 DAPK1P53355 1430 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms