RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
LDLRAD3-201ENST00000315571 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
LDLRAD3-201ENST00000315571 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
LDLRAD3-201ENST00000315571 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
LDLRAD3-201ENST00000315571 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
LDLRAD3-201ENST00000315571 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
LDLRAD3-201ENST00000315571 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
LDLRAD3-201ENST00000315571 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
LDLRAD3-201ENST00000315571 CUL7Q14999 1698 aa17.29■□□□□ 0.36
LDLRAD3-201ENST00000315571 KIF21BO75037 1637 aa17.29■□□□□ 0.36
LDLRAD3-201ENST00000315571 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
LDLRAD3-201ENST00000315571 FBLN2P98095 1184 aa17.28■□□□□ 0.36
LDLRAD3-201ENST00000315571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
LDLRAD3-201ENST00000315571 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.35
LDLRAD3-201ENST00000315571 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
LDLRAD3-201ENST00000315571 ADAMTS12P58397 1594 aa17.24■□□□□ 0.35
LDLRAD3-201ENST00000315571 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
LDLRAD3-201ENST00000315571 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
LDLRAD3-201ENST00000315571 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
LDLRAD3-201ENST00000315571 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
LDLRAD3-201ENST00000315571 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
LDLRAD3-201ENST00000315571 BCANQ96GW7 911 aa17.06■□□□□ 0.32
LDLRAD3-201ENST00000315571 CHD1O14646 1710 aa17.04■□□□□ 0.32
LDLRAD3-201ENST00000315571 CLIP1P30622 1438 aa17.04■□□□□ 0.32
LDLRAD3-201ENST00000315571 NUP160Q12769 1436 aa17.03■□□□□ 0.32
LDLRAD3-201ENST00000315571 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
LDLRAD3-201ENST00000315571 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
LDLRAD3-201ENST00000315571 CTTNBP2Q8WZ74 1663 aa17.01■□□□□ 0.31
LDLRAD3-201ENST00000315571 IQGAP2Q13576 1575 aa17■□□□□ 0.31
LDLRAD3-201ENST00000315571 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
LDLRAD3-201ENST00000315571 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
LDLRAD3-201ENST00000315571 APLP2Q06481 763 aa16.96■□□□□ 0.31
LDLRAD3-201ENST00000315571 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
LDLRAD3-201ENST00000315571 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
LDLRAD3-201ENST00000315571 JPH4Q96JJ6 628 aa16.95■□□□□ 0.3
LDLRAD3-201ENST00000315571 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
LDLRAD3-201ENST00000315571 MIER1Q8N108 512 aa16.91■□□□□ 0.3
LDLRAD3-201ENST00000315571 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
LDLRAD3-201ENST00000315571 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
LDLRAD3-201ENST00000315571 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
LDLRAD3-201ENST00000315571 UGGT2Q9NYU1 1516 aa16.89■□□□□ 0.29
LDLRAD3-201ENST00000315571 CARMIL2Q6F5E8 1435 aa16.88■□□□□ 0.29
LDLRAD3-201ENST00000315571 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
LDLRAD3-201ENST00000315571 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
LDLRAD3-201ENST00000315571 PRG4Q92954 1404 aaPredicted RBP16.86■□□□□ 0.29
LDLRAD3-201ENST00000315571 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
LDLRAD3-201ENST00000315571 CCDC136Q96JN2 1154 aa16.85■□□□□ 0.29
LDLRAD3-201ENST00000315571 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
LDLRAD3-201ENST00000315571 DISP1Q96F81 1524 aa16.82■□□□□ 0.28
LDLRAD3-201ENST00000315571 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
LDLRAD3-201ENST00000315571 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
LDLRAD3-201ENST00000315571 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
LDLRAD3-201ENST00000315571 NEFLP07196 543 aa16.79■□□□□ 0.28
LDLRAD3-201ENST00000315571 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
LDLRAD3-201ENST00000315571 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
LDLRAD3-201ENST00000315571 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.27
LDLRAD3-201ENST00000315571 PTPRGP23470 1445 aa16.74■□□□□ 0.27
LDLRAD3-201ENST00000315571 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
LDLRAD3-201ENST00000315571 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
LDLRAD3-201ENST00000315571 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
LDLRAD3-201ENST00000315571 RTN4Q9NQC3 1192 aaKnown RBP16.68■□□□□ 0.26
LDLRAD3-201ENST00000315571 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
LDLRAD3-201ENST00000315571 DEKP35659 375 aaKnown RBP16.67■□□□□ 0.26
LDLRAD3-201ENST00000315571 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
LDLRAD3-201ENST00000315571 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
LDLRAD3-201ENST00000315571 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
LDLRAD3-201ENST00000315571 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
LDLRAD3-201ENST00000315571 FKBP8Q14318 412 aa16.65■□□□□ 0.26
LDLRAD3-201ENST00000315571 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
LDLRAD3-201ENST00000315571 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
LDLRAD3-201ENST00000315571 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
LDLRAD3-201ENST00000315571 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
LDLRAD3-201ENST00000315571 ITGAEP38570 1179 aa16.61■□□□□ 0.25
LDLRAD3-201ENST00000315571 UACAQ9BZF9 1416 aa16.61■□□□□ 0.25
LDLRAD3-201ENST00000315571 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
LDLRAD3-201ENST00000315571 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
LDLRAD3-201ENST00000315571 NBR1Q14596 966 aa16.61■□□□□ 0.25
LDLRAD3-201ENST00000315571 ABCA8O94911 1581 aa16.57■□□□□ 0.24
LDLRAD3-201ENST00000315571 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
LDLRAD3-201ENST00000315571 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
LDLRAD3-201ENST00000315571 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
LDLRAD3-201ENST00000315571 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
LDLRAD3-201ENST00000315571 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
LDLRAD3-201ENST00000315571 EPRSP07814 1512 aaKnown RBP16.56■□□□□ 0.24
LDLRAD3-201ENST00000315571 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
LDLRAD3-201ENST00000315571 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 TIAM1Q13009 1591 aa16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
LDLRAD3-201ENST00000315571 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
LDLRAD3-201ENST00000315571 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
LDLRAD3-201ENST00000315571 MAP3K1Q13233 1512 aa16.52■□□□□ 0.24
LDLRAD3-201ENST00000315571 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
LDLRAD3-201ENST00000315571 UHRF1BP1LA0JNW5 1464 aa16.51■□□□□ 0.23
LDLRAD3-201ENST00000315571 ATP10BO94823 1461 aa16.49■□□□□ 0.23
LDLRAD3-201ENST00000315571 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
LDLRAD3-201ENST00000315571 CFAP43Q8NDM7 1665 aa16.49■□□□□ 0.23
LDLRAD3-201ENST00000315571 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms