RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
GPHN-201ENST00000315266 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
GPHN-201ENST00000315266 KIF21BO75037 1637 aa14.56□□□□□ -0.08
GPHN-201ENST00000315266 GAPVD1Q14C86 1478 aa14.55□□□□□ -0.08
GPHN-201ENST00000315266 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
GPHN-201ENST00000315266 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
GPHN-201ENST00000315266 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
GPHN-201ENST00000315266 PRXQ9BXM0 1461 aa14.5□□□□□ -0.09
GPHN-201ENST00000315266 ERICH3Q5RHP9 1530 aa14.5□□□□□ -0.09
GPHN-201ENST00000315266 ACIN1Q9UKV3 1341 aaKnown RBP14.48□□□□□ -0.09
GPHN-201ENST00000315266 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.09
GPHN-201ENST00000315266 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
GPHN-201ENST00000315266 ZNF777Q9ULD5 760 aaPredicted RBP14.43□□□□□ -0.1
GPHN-201ENST00000315266 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
GPHN-201ENST00000315266 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
GPHN-201ENST00000315266 WDR62O43379 1518 aa14.39□□□□□ -0.11
GPHN-201ENST00000315266 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
GPHN-201ENST00000315266 ZNF326Q5BKZ1 582 aaKnown RBP14.38□□□□□ -0.11
GPHN-201ENST00000315266 CUL7Q14999 1698 aa14.37□□□□□ -0.11
GPHN-201ENST00000315266 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
GPHN-201ENST00000315266 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
GPHN-201ENST00000315266 ZNF608Q9ULD9 1512 aaPredicted RBP14.33□□□□□ -0.11
GPHN-201ENST00000315266 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
GPHN-201ENST00000315266 TARBP1Q13395 1621 aaKnown RBP14.28□□□□□ -0.12
GPHN-201ENST00000315266 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
GPHN-201ENST00000315266 ABCA5Q8WWZ7 1642 aa14.27□□□□□ -0.12
GPHN-201ENST00000315266 FMN1Q68DA7 1419 aa14.27□□□□□ -0.13
GPHN-201ENST00000315266 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
GPHN-201ENST00000315266 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
GPHN-201ENST00000315266 CDK11AQ9UQ88 783 aaPredicted RBP14.25□□□□□ -0.13
GPHN-201ENST00000315266 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
GPHN-201ENST00000315266 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
GPHN-201ENST00000315266 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
GPHN-201ENST00000315266 CARMIL2Q6F5E8 1435 aa14.23□□□□□ -0.13
GPHN-201ENST00000315266 ARAP1Q96P48 1450 aa14.23□□□□□ -0.13
GPHN-201ENST00000315266 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
GPHN-201ENST00000315266 JPH4Q96JJ6 628 aa14.21□□□□□ -0.13
GPHN-201ENST00000315266 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.13
GPHN-201ENST00000315266 WDR97A6NE52 1622 aa14.21□□□□□ -0.14
GPHN-201ENST00000315266 PBRM1Q86U86 1689 aa14.21□□□□□ -0.14
GPHN-201ENST00000315266 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
GPHN-201ENST00000315266 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
GPHN-201ENST00000315266 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
GPHN-201ENST00000315266 MIER1Q8N108 512 aa14.19□□□□□ -0.14
GPHN-201ENST00000315266 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
GPHN-201ENST00000315266 ADAMTS12P58397 1594 aa14.18□□□□□ -0.14
GPHN-201ENST00000315266 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
GPHN-201ENST00000315266 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
GPHN-201ENST00000315266 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
GPHN-201ENST00000315266 IQGAP2Q13576 1575 aa14.15□□□□□ -0.14
GPHN-201ENST00000315266 KCNH8Q96L42 1107 aa14.15□□□□□ -0.14
GPHN-201ENST00000315266 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
GPHN-201ENST00000315266 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
GPHN-201ENST00000315266 MYT1Q01538 1121 aa14.1□□□□□ -0.15
GPHN-201ENST00000315266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
GPHN-201ENST00000315266 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
GPHN-201ENST00000315266 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
GPHN-201ENST00000315266 BCANQ96GW7 911 aa14.08□□□□□ -0.16
GPHN-201ENST00000315266 FYCO1Q9BQS8 1478 aa14.07□□□□□ -0.16
GPHN-201ENST00000315266 NEFLP07196 543 aa14.06□□□□□ -0.16
GPHN-201ENST00000315266 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
GPHN-201ENST00000315266 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
GPHN-201ENST00000315266 PTPRGP23470 1445 aa14.04□□□□□ -0.16
GPHN-201ENST00000315266 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
GPHN-201ENST00000315266 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
GPHN-201ENST00000315266 PRG4Q92954 1404 aaPredicted RBP14.03□□□□□ -0.16
GPHN-201ENST00000315266 PCF11O94913 1555 aaKnown RBP14.01□□□□□ -0.17
GPHN-201ENST00000315266 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
GPHN-201ENST00000315266 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
GPHN-201ENST00000315266 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
GPHN-201ENST00000315266 TIAM1Q13009 1591 aa14□□□□□ -0.17
GPHN-201ENST00000315266 KDM2AQ9Y2K7 1162 aa13.99□□□□□ -0.17
GPHN-201ENST00000315266 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
GPHN-201ENST00000315266 NUP160Q12769 1436 aa13.98□□□□□ -0.17
GPHN-201ENST00000315266 CHGAP10645 457 aaKnown RBP13.98□□□□□ -0.17
GPHN-201ENST00000315266 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
GPHN-201ENST00000315266 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
GPHN-201ENST00000315266 MAP3K1Q13233 1512 aa13.96□□□□□ -0.18
GPHN-201ENST00000315266 CFDP1Q9UEE9 299 aaPredicted RBP13.95□□□□□ -0.18
GPHN-201ENST00000315266 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
GPHN-201ENST00000315266 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
GPHN-201ENST00000315266 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
GPHN-201ENST00000315266 EPRSP07814 1512 aaKnown RBP13.91□□□□□ -0.18
GPHN-201ENST00000315266 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
GPHN-201ENST00000315266 ERICH6Q7L0X2 663 aa13.9□□□□□ -0.19
GPHN-201ENST00000315266 DISP1Q96F81 1524 aa13.89□□□□□ -0.19
GPHN-201ENST00000315266 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
GPHN-201ENST00000315266 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
GPHN-201ENST00000315266 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
GPHN-201ENST00000315266 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
GPHN-201ENST00000315266 FOXD1Q16676 465 aa13.87□□□□□ -0.19
GPHN-201ENST00000315266 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
GPHN-201ENST00000315266 CHD1O14646 1710 aa13.87□□□□□ -0.19
GPHN-201ENST00000315266 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
GPHN-201ENST00000315266 TSPY4P0CV99 314 aa13.86□□□□□ -0.19
GPHN-201ENST00000315266 TSPY10P0CW01 314 aa13.86□□□□□ -0.19
GPHN-201ENST00000315266 RRBP1Q9P2E9 1410 aaKnown RBP13.86□□□□□ -0.19
GPHN-201ENST00000315266 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
GPHN-201ENST00000315266 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
GPHN-201ENST00000315266 ANP32CO43423 234 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms