RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
SOX30-202ENST00000311371 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
SOX30-202ENST00000311371 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
SOX30-202ENST00000311371 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
SOX30-202ENST00000311371 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
SOX30-202ENST00000311371 ANP32CO43423 234 aa22.47■■□□□ 1.19
SOX30-202ENST00000311371 EIF5BO60841 1220 aaKnown RBP22.47■■□□□ 1.19
SOX30-202ENST00000311371 GOLGA3Q08378 1498 aa22.46■■□□□ 1.19
SOX30-202ENST00000311371 CCER2I3L3R5 266 aa22.46■■□□□ 1.19
SOX30-202ENST00000311371 RANGAP1P46060 587 aaPredicted RBP22.46■■□□□ 1.19
SOX30-202ENST00000311371 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
SOX30-202ENST00000311371 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
SOX30-202ENST00000311371 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
SOX30-202ENST00000311371 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
SOX30-202ENST00000311371 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
SOX30-202ENST00000311371 CLIP1P30622 1438 aa22.41■■□□□ 1.18
SOX30-202ENST00000311371 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
SOX30-202ENST00000311371 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
SOX30-202ENST00000311371 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
SOX30-202ENST00000311371 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
SOX30-202ENST00000311371 EEA1Q15075 1411 aa22.33■■□□□ 1.17
SOX30-202ENST00000311371 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
SOX30-202ENST00000311371 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
SOX30-202ENST00000311371 CUX1P39880 1505 aa22.32■■□□□ 1.16
SOX30-202ENST00000311371 ANP32AP39687 249 aaKnown RBP22.3■■□□□ 1.16
SOX30-202ENST00000311371 PKNOX2Q96KN3 472 aa22.3■■□□□ 1.16
SOX30-202ENST00000311371 IPO9Q96P70 1041 aaKnown RBP22.3■■□□□ 1.16
SOX30-202ENST00000311371 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
SOX30-202ENST00000311371 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
SOX30-202ENST00000311371 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
SOX30-202ENST00000311371 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
SOX30-202ENST00000311371 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
SOX30-202ENST00000311371 WASHC2AQ641Q2 1341 aa22.19■■□□□ 1.14
SOX30-202ENST00000311371 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
SOX30-202ENST00000311371 URB2Q14146 1524 aaKnown RBP22.18■■□□□ 1.14
SOX30-202ENST00000311371 NEFMP07197 916 aa22.17■■□□□ 1.14
SOX30-202ENST00000311371 LAS1LQ9Y4W2 734 aaKnown RBP22.17■■□□□ 1.14
SOX30-202ENST00000311371 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
SOX30-202ENST00000311371 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
SOX30-202ENST00000311371 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
SOX30-202ENST00000311371 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
SOX30-202ENST00000311371 TIMELESSQ9UNS1 1208 aa22.13■■□□□ 1.13
SOX30-202ENST00000311371 C11orf95C9JLR9 678 aaPredicted RBP22.11■■□□□ 1.13
SOX30-202ENST00000311371 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
SOX30-202ENST00000311371 FGD5Q6ZNL6 1462 aa22.1■■□□□ 1.13
SOX30-202ENST00000311371 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.13
SOX30-202ENST00000311371 RAB3GAP2Q9H2M9 1393 aa22.07■■□□□ 1.12
SOX30-202ENST00000311371 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
SOX30-202ENST00000311371 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
SOX30-202ENST00000311371 KIF21BO75037 1637 aa22.06■■□□□ 1.12
SOX30-202ENST00000311371 CUX2O14529 1486 aa22.03■■□□□ 1.12
SOX30-202ENST00000311371 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
SOX30-202ENST00000311371 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
SOX30-202ENST00000311371 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
SOX30-202ENST00000311371 USP35Q9P2H5 1018 aa22■■□□□ 1.11
SOX30-202ENST00000311371 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
SOX30-202ENST00000311371 CCNB3Q8WWL7 1395 aa21.98■■□□□ 1.11
SOX30-202ENST00000311371 WDR62O43379 1518 aa21.98■■□□□ 1.11
SOX30-202ENST00000311371 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
SOX30-202ENST00000311371 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
SOX30-202ENST00000311371 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
SOX30-202ENST00000311371 GSE1Q14687 1217 aa21.92■■□□□ 1.1
SOX30-202ENST00000311371 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
SOX30-202ENST00000311371 PLEKHG5O94827 1062 aa21.88■■□□□ 1.09
SOX30-202ENST00000311371 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
SOX30-202ENST00000311371 TARBP1Q13395 1621 aaKnown RBP21.87■■□□□ 1.09
SOX30-202ENST00000311371 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
SOX30-202ENST00000311371 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
SOX30-202ENST00000311371 GLIPR1L2Q4G1C9 344 aa21.86■■□□□ 1.09
SOX30-202ENST00000311371 ZMYND15Q9H091 742 aa21.86■■□□□ 1.09
SOX30-202ENST00000311371 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
SOX30-202ENST00000311371 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.08
SOX30-202ENST00000311371 FRAT1Q92837 279 aaPredicted RBP21.82■■□□□ 1.08
SOX30-202ENST00000311371 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
SOX30-202ENST00000311371 ZBED9Q6R2W3 1325 aa21.79■■□□□ 1.08
SOX30-202ENST00000311371 PODXL2Q9NZ53 605 aa21.79■■□□□ 1.08
SOX30-202ENST00000311371 AKNAQ7Z591 1439 aa21.79■■□□□ 1.08
SOX30-202ENST00000311371 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
SOX30-202ENST00000311371 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
SOX30-202ENST00000311371 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
SOX30-202ENST00000311371 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
SOX30-202ENST00000311371 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
SOX30-202ENST00000311371 FAM43AQ8N2R8 423 aa21.74■■□□□ 1.07
SOX30-202ENST00000311371 TONSLQ96HA7 1378 aa21.73■■□□□ 1.07
SOX30-202ENST00000311371 NFKBIBQ15653 356 aa21.72■■□□□ 1.07
SOX30-202ENST00000311371 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
SOX30-202ENST00000311371 IGF1RP08069 1367 aa21.71■■□□□ 1.07
SOX30-202ENST00000311371 PDE4AP27815 886 aa21.7■■□□□ 1.06
SOX30-202ENST00000311371 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
SOX30-202ENST00000311371 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
SOX30-202ENST00000311371 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
SOX30-202ENST00000311371 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
SOX30-202ENST00000311371 DCAF11Q8TEB1 546 aa21.65■■□□□ 1.06
SOX30-202ENST00000311371 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
SOX30-202ENST00000311371 PRXQ9BXM0 1461 aa21.65■■□□□ 1.06
SOX30-202ENST00000311371 SLC4A3P48751 1232 aa21.64■■□□□ 1.05
SOX30-202ENST00000311371 TCERG1O14776 1098 aaKnown RBP21.61■■□□□ 1.05
SOX30-202ENST00000311371 BACH2Q9BYV9 841 aa21.61■■□□□ 1.05
SOX30-202ENST00000311371 PRKRIP1Q9H875 184 aaPredicted RBP21.61■■□□□ 1.05
SOX30-202ENST00000311371 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms