RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
PAAF1-201ENST00000310571 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
PAAF1-201ENST00000310571 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
PAAF1-201ENST00000310571 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
PAAF1-201ENST00000310571 IGF1RP08069 1367 aa19.16■□□□□ 0.66
PAAF1-201ENST00000310571 RAD54L2Q9Y4B4 1467 aa19.14■□□□□ 0.66
PAAF1-201ENST00000310571 KCNH8Q96L42 1107 aa19.14■□□□□ 0.65
PAAF1-201ENST00000310571 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
PAAF1-201ENST00000310571 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
PAAF1-201ENST00000310571 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
PAAF1-201ENST00000310571 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
PAAF1-201ENST00000310571 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
PAAF1-201ENST00000310571 NESP48681 1621 aa19.09■□□□□ 0.65
PAAF1-201ENST00000310571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.654e-6■■■■□ 19.6
PAAF1-201ENST00000310571 DDX10Q13206 875 aaKnown RBP19.07■□□□□ 0.64
PAAF1-201ENST00000310571 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
PAAF1-201ENST00000310571 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
PAAF1-201ENST00000310571 CUX1P39880 1505 aa19.04■□□□□ 0.64
PAAF1-201ENST00000310571 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
PAAF1-201ENST00000310571 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.64
PAAF1-201ENST00000310571 KIF21BO75037 1637 aa19■□□□□ 0.63
PAAF1-201ENST00000310571 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
PAAF1-201ENST00000310571 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
PAAF1-201ENST00000310571 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
PAAF1-201ENST00000310571 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
PAAF1-201ENST00000310571 CARMIL2Q6F5E8 1435 aa18.98■□□□□ 0.63
PAAF1-201ENST00000310571 MIER1Q8N108 512 aa18.95■□□□□ 0.62
PAAF1-201ENST00000310571 SETD5Q9C0A6 1442 aa18.95■□□□□ 0.62
PAAF1-201ENST00000310571 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
PAAF1-201ENST00000310571 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
PAAF1-201ENST00000310571 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
PAAF1-201ENST00000310571 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
PAAF1-201ENST00000310571 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
PAAF1-201ENST00000310571 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
PAAF1-201ENST00000310571 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■■■■□ 21.4
PAAF1-201ENST00000310571 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
PAAF1-201ENST00000310571 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
PAAF1-201ENST00000310571 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
PAAF1-201ENST00000310571 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
PAAF1-201ENST00000310571 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
PAAF1-201ENST00000310571 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
PAAF1-201ENST00000310571 BCANQ96GW7 911 aa18.81■□□□□ 0.6
PAAF1-201ENST00000310571 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
PAAF1-201ENST00000310571 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
PAAF1-201ENST00000310571 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
PAAF1-201ENST00000310571 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
PAAF1-201ENST00000310571 CCDC18Q5T9S5 1454 aa18.75■□□□□ 0.59
PAAF1-201ENST00000310571 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
PAAF1-201ENST00000310571 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
PAAF1-201ENST00000310571 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
PAAF1-201ENST00000310571 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
PAAF1-201ENST00000310571 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
PAAF1-201ENST00000310571 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
PAAF1-201ENST00000310571 FOXD1Q16676 465 aa18.71■□□□□ 0.59
PAAF1-201ENST00000310571 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
PAAF1-201ENST00000310571 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
PAAF1-201ENST00000310571 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
PAAF1-201ENST00000310571 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
PAAF1-201ENST00000310571 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
PAAF1-201ENST00000310571 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
PAAF1-201ENST00000310571 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
PAAF1-201ENST00000310571 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
PAAF1-201ENST00000310571 PTPRGP23470 1445 aa18.66■□□□□ 0.58
PAAF1-201ENST00000310571 PKD2Q13563 968 aa18.64■□□□□ 0.57
PAAF1-201ENST00000310571 MRS2Q9HD23 443 aa18.64■□□□□ 0.57
PAAF1-201ENST00000310571 HNRNPMP52272 730 aaKnown RBP eCLIP18.63■□□□□ 0.57
PAAF1-201ENST00000310571 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
PAAF1-201ENST00000310571 ANKRD30AQ9BXX3 1397 aa18.63■□□□□ 0.57
PAAF1-201ENST00000310571 PLPPR3Q6T4P5 718 aa18.62■□□□□ 0.57
PAAF1-201ENST00000310571 EFCAB2Q5VUJ9 269 aa18.61■□□□□ 0.57
PAAF1-201ENST00000310571 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
PAAF1-201ENST00000310571 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
PAAF1-201ENST00000310571 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
PAAF1-201ENST00000310571 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
PAAF1-201ENST00000310571 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
PAAF1-201ENST00000310571 NUP155O75694 1391 aa18.57■□□□□ 0.56
PAAF1-201ENST00000310571 PPP1R15AO75807 674 aaPredicted RBP18.57■□□□□ 0.56
PAAF1-201ENST00000310571 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
PAAF1-201ENST00000310571 MYOM3Q5VTT5 1437 aa18.56■□□□□ 0.56
PAAF1-201ENST00000310571 FKBP8Q14318 412 aa18.55■□□□□ 0.56
PAAF1-201ENST00000310571 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
PAAF1-201ENST00000310571 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
PAAF1-201ENST00000310571 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
PAAF1-201ENST00000310571 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
PAAF1-201ENST00000310571 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
PAAF1-201ENST00000310571 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
PAAF1-201ENST00000310571 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
PAAF1-201ENST00000310571 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
PAAF1-201ENST00000310571 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
PAAF1-201ENST00000310571 ZNF644Q9H582 1327 aaPredicted RBP18.51■□□□□ 0.55
PAAF1-201ENST00000310571 TIAM1Q13009 1591 aa18.49■□□□□ 0.55
PAAF1-201ENST00000310571 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
PAAF1-201ENST00000310571 KANK1Q14678 1352 aa18.48■□□□□ 0.55
PAAF1-201ENST00000310571 CUL7Q14999 1698 aa18.48■□□□□ 0.55
PAAF1-201ENST00000310571 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
PAAF1-201ENST00000310571 NEFMP07197 916 aa18.43■□□□□ 0.54
PAAF1-201ENST00000310571 GGT6Q6P531 493 aa18.43■□□□□ 0.54
PAAF1-201ENST00000310571 PRG4Q92954 1404 aaPredicted RBP18.42■□□□□ 0.54
PAAF1-201ENST00000310571 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
PAAF1-201ENST00000310571 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms