RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 PCF11O94913 1555 aaKnown RBP22.48■■□□□ 1.19
SPIRE1-201ENST00000309836 CUL7Q14999 1698 aa22.46■■□□□ 1.19
SPIRE1-201ENST00000309836 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
SPIRE1-201ENST00000309836 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
SPIRE1-201ENST00000309836 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
SPIRE1-201ENST00000309836 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
SPIRE1-201ENST00000309836 MIER1Q8N108 512 aa22.41■■□□□ 1.18
SPIRE1-201ENST00000309836 EFCAB5A4FU69 1503 aa22.41■■□□□ 1.18
SPIRE1-201ENST00000309836 CTTNBP2Q8WZ74 1663 aa22.4■■□□□ 1.18
SPIRE1-201ENST00000309836 PHLDB1Q86UU1 1377 aa22.39■■□□□ 1.17
SPIRE1-201ENST00000309836 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
SPIRE1-201ENST00000309836 P3H3Q8IVL6 736 aa22.38■■□□□ 1.17
SPIRE1-201ENST00000309836 ITGAEP38570 1179 aa22.37■■□□□ 1.17
SPIRE1-201ENST00000309836 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
SPIRE1-201ENST00000309836 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
SPIRE1-201ENST00000309836 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
SPIRE1-201ENST00000309836 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.17
SPIRE1-201ENST00000309836 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
SPIRE1-201ENST00000309836 GTF3C3Q9Y5Q9 886 aa22.32■■□□□ 1.16
SPIRE1-201ENST00000309836 MAPKBP1O60336 1514 aa22.3■■□□□ 1.16
SPIRE1-201ENST00000309836 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
SPIRE1-201ENST00000309836 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
SPIRE1-201ENST00000309836 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
SPIRE1-201ENST00000309836 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
SPIRE1-201ENST00000309836 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
SPIRE1-201ENST00000309836 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
SPIRE1-201ENST00000309836 SAMD9Q5K651 1589 aa22.23■■□□□ 1.15
SPIRE1-201ENST00000309836 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
SPIRE1-201ENST00000309836 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
SPIRE1-201ENST00000309836 ATP1B4Q9UN42 357 aaPredicted RBP22.23■■□□□ 1.15
SPIRE1-201ENST00000309836 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
SPIRE1-201ENST00000309836 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
SPIRE1-201ENST00000309836 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
SPIRE1-201ENST00000309836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.16■■□□□ 1.14
SPIRE1-201ENST00000309836 LRRIQ1Q96JM4 1722 aa22.16■■□□□ 1.14
SPIRE1-201ENST00000309836 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
SPIRE1-201ENST00000309836 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
SPIRE1-201ENST00000309836 FGD6Q6ZV73 1430 aa22.11■■□□□ 1.13
SPIRE1-201ENST00000309836 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
SPIRE1-201ENST00000309836 PBRM1Q86U86 1689 aa22.06■■□□□ 1.12
SPIRE1-201ENST00000309836 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
SPIRE1-201ENST00000309836 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
SPIRE1-201ENST00000309836 NCOA2Q15596 1464 aa22.01■■□□□ 1.11
SPIRE1-201ENST00000309836 EHBP1L1Q8N3D4 1523 aa22■■□□□ 1.11
SPIRE1-201ENST00000309836 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
SPIRE1-201ENST00000309836 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
SPIRE1-201ENST00000309836 SUPT6HQ7KZ85 1726 aaKnown RBP21.99■■□□□ 1.11
SPIRE1-201ENST00000309836 MYOM3Q5VTT5 1437 aa21.98■■□□□ 1.11
SPIRE1-201ENST00000309836 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SPIRE1-201ENST00000309836 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
SPIRE1-201ENST00000309836 PTPN23Q9H3S7 1636 aa21.96■■□□□ 1.11
SPIRE1-201ENST00000309836 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.11
SPIRE1-201ENST00000309836 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
SPIRE1-201ENST00000309836 UGGT2Q9NYU1 1516 aa21.95■■□□□ 1.1
SPIRE1-201ENST00000309836 HFM1A2PYH4 1435 aa21.94■■□□□ 1.1
SPIRE1-201ENST00000309836 IQGAP2Q13576 1575 aa21.94■■□□□ 1.1
SPIRE1-201ENST00000309836 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
SPIRE1-201ENST00000309836 HECW1Q76N89 1606 aa21.91■■□□□ 1.1
SPIRE1-201ENST00000309836 NAIPQ13075 1403 aa21.88■■□□□ 1.09
SPIRE1-201ENST00000309836 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
SPIRE1-201ENST00000309836 WDR62O43379 1518 aa21.85■■□□□ 1.09
SPIRE1-201ENST00000309836 TCOF1Q13428 1488 aaKnown RBP21.85■■□□□ 1.09
SPIRE1-201ENST00000309836 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
SPIRE1-201ENST00000309836 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
SPIRE1-201ENST00000309836 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
SPIRE1-201ENST00000309836 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
SPIRE1-201ENST00000309836 CDK13Q14004 1512 aaKnown RBP21.81■■□□□ 1.08
SPIRE1-201ENST00000309836 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
SPIRE1-201ENST00000309836 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
SPIRE1-201ENST00000309836 DDX10Q13206 875 aaKnown RBP21.74■■□□□ 1.07
SPIRE1-201ENST00000309836 KCNH8Q96L42 1107 aa21.74■■□□□ 1.07
SPIRE1-201ENST00000309836 KDM5BQ9UGL1 1544 aa21.73■■□□□ 1.07
SPIRE1-201ENST00000309836 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
SPIRE1-201ENST00000309836 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
SPIRE1-201ENST00000309836 DISP1Q96F81 1524 aa21.71■■□□□ 1.07
SPIRE1-201ENST00000309836 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
SPIRE1-201ENST00000309836 KDM6BO15054 1643 aa21.71■■□□□ 1.07
SPIRE1-201ENST00000309836 MIA2Q96PC5 1412 aa21.71■■□□□ 1.07
SPIRE1-201ENST00000309836 RRP7BPQ9NSQ0 103 aa21.69■■□□□ 1.06
SPIRE1-201ENST00000309836 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
SPIRE1-201ENST00000309836 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
SPIRE1-201ENST00000309836 DENND4BO75064 1496 aaPredicted RBP21.68■■□□□ 1.06
SPIRE1-201ENST00000309836 CHIC2Q9UKJ5 165 aa21.66■■□□□ 1.06
SPIRE1-201ENST00000309836 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
SPIRE1-201ENST00000309836 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
SPIRE1-201ENST00000309836 NUP153P49790 1475 aaKnown RBP21.64■■□□□ 1.05
SPIRE1-201ENST00000309836 RAPGEF6Q8TEU7 1601 aa21.63■■□□□ 1.05
SPIRE1-201ENST00000309836 SUPT16HQ9Y5B9 1047 aaKnown RBP21.6■■□□□ 1.05
SPIRE1-201ENST00000309836 DNMT1P26358 1616 aaKnown RBP21.57■■□□□ 1.04
SPIRE1-201ENST00000309836 DAPK1P53355 1430 aa21.57■■□□□ 1.04
SPIRE1-201ENST00000309836 CEP170Q5SW79 1584 aa21.55■■□□□ 1.04
SPIRE1-201ENST00000309836 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
SPIRE1-201ENST00000309836 MAGI1Q96QZ7 1491 aaPredicted RBP21.55■■□□□ 1.04
SPIRE1-201ENST00000309836 ROCK1Q13464 1354 aa21.54■■□□□ 1.04
SPIRE1-201ENST00000309836 ABCC5O15440 1437 aa21.54■■□□□ 1.04
SPIRE1-201ENST00000309836 CCER2I3L3R5 266 aa21.52■■□□□ 1.04
SPIRE1-201ENST00000309836 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
SPIRE1-201ENST00000309836 MPHOSPH9Q99550 1183 aa21.52■■□□□ 1.03
SPIRE1-201ENST00000309836 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
SPIRE1-201ENST00000309836 ZNF644Q9H582 1327 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms