RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
MUC4-201ENST00000308466 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
MUC4-201ENST00000308466 CC2D2AQ9P2K1 1620 aa15.09■□□□□ 0.01
MUC4-201ENST00000308466 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0.01
MUC4-201ENST00000308466 TONSLQ96HA7 1378 aa15.08■□□□□ 0
MUC4-201ENST00000308466 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
MUC4-201ENST00000308466 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
MUC4-201ENST00000308466 DHX57Q6P158 1386 aaKnown RBP15.05■□□□□ 0
MUC4-201ENST00000308466 ARAP1Q96P48 1450 aa15.04■□□□□ -0
MUC4-201ENST00000308466 ZNF326Q5BKZ1 582 aaKnown RBP15.04■□□□□ -0
MUC4-201ENST00000308466 RAB3GAP2Q9H2M9 1393 aa15.04■□□□□ -0
MUC4-201ENST00000308466 TOP2BQ02880 1626 aa15.04■□□□□ -0
MUC4-201ENST00000308466 CFTRP13569 1480 aa15.03■□□□□ -0
MUC4-201ENST00000308466 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
MUC4-201ENST00000308466 CUX1P39880 1505 aa15.03■□□□□ -0
MUC4-201ENST00000308466 PRXQ9BXM0 1461 aa15.03■□□□□ -0
MUC4-201ENST00000308466 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
MUC4-201ENST00000308466 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
MUC4-201ENST00000308466 HMGXB3Q12766 1538 aa15□□□□□ -0.01
MUC4-201ENST00000308466 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
MUC4-201ENST00000308466 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
MUC4-201ENST00000308466 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
MUC4-201ENST00000308466 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
MUC4-201ENST00000308466 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
MUC4-201ENST00000308466 NESP48681 1621 aa14.95□□□□□ -0.02
MUC4-201ENST00000308466 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
MUC4-201ENST00000308466 FKBP8Q14318 412 aa14.92□□□□□ -0.02
MUC4-201ENST00000308466 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
MUC4-201ENST00000308466 PHLDB1Q86UU1 1377 aa14.88□□□□□ -0.03
MUC4-201ENST00000308466 MYT1LQ9UL68 1186 aa14.88□□□□□ -0.03
MUC4-201ENST00000308466 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
MUC4-201ENST00000308466 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
MUC4-201ENST00000308466 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
MUC4-201ENST00000308466 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
MUC4-201ENST00000308466 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
MUC4-201ENST00000308466 PPP1R15AO75807 674 aaPredicted RBP14.83□□□□□ -0.04
MUC4-201ENST00000308466 FOXD1Q16676 465 aa14.83□□□□□ -0.04
MUC4-201ENST00000308466 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.04
MUC4-201ENST00000308466 FAM9BQ8IZU0 186 aa14.81□□□□□ -0.04
MUC4-201ENST00000308466 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
MUC4-201ENST00000308466 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.043e-6■■■■■ 34.3
MUC4-201ENST00000308466 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
MUC4-201ENST00000308466 TIMELESSQ9UNS1 1208 aa14.78□□□□□ -0.04
MUC4-201ENST00000308466 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
MUC4-201ENST00000308466 SUPT16HQ9Y5B9 1047 aaKnown RBP14.78□□□□□ -0.04
MUC4-201ENST00000308466 KDM2AQ9Y2K7 1162 aa14.76□□□□□ -0.05
MUC4-201ENST00000308466 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
MUC4-201ENST00000308466 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
MUC4-201ENST00000308466 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
MUC4-201ENST00000308466 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
MUC4-201ENST00000308466 TSPY4P0CV99 314 aa14.73□□□□□ -0.05
MUC4-201ENST00000308466 TSPY10P0CW01 314 aa14.73□□□□□ -0.05
MUC4-201ENST00000308466 PLEKHD1A6NEE1 506 aa14.72□□□□□ -0.05
MUC4-201ENST00000308466 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
MUC4-201ENST00000308466 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
MUC4-201ENST00000308466 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
MUC4-201ENST00000308466 SENP3-EIF4A1A0A087X0R7 540 aa14.71□□□□□ -0.05
MUC4-201ENST00000308466 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
MUC4-201ENST00000308466 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
MUC4-201ENST00000308466 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
MUC4-201ENST00000308466 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
MUC4-201ENST00000308466 HSPA5P11021 654 aaKnown RBP14.69□□□□□ -0.06
MUC4-201ENST00000308466 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
MUC4-201ENST00000308466 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
MUC4-201ENST00000308466 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.06
MUC4-201ENST00000308466 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
MUC4-201ENST00000308466 CASKIN1Q8WXD9 1431 aa14.67□□□□□ -0.06
MUC4-201ENST00000308466 L3MBTL2Q969R5 705 aa14.66□□□□□ -0.06
MUC4-201ENST00000308466 CCDC18Q5T9S5 1454 aa14.64□□□□□ -0.07
MUC4-201ENST00000308466 RTN4Q9NQC3 1192 aaKnown RBP14.64□□□□□ -0.07
MUC4-201ENST00000308466 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
MUC4-201ENST00000308466 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
MUC4-201ENST00000308466 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
MUC4-201ENST00000308466 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
MUC4-201ENST00000308466 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
MUC4-201ENST00000308466 CCER2I3L3R5 266 aa14.61□□□□□ -0.07
MUC4-201ENST00000308466 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.61□□□□□ -0.07
MUC4-201ENST00000308466 FYCO1Q9BQS8 1478 aa14.61□□□□□ -0.07
MUC4-201ENST00000308466 MYOM3Q5VTT5 1437 aa14.6□□□□□ -0.07
MUC4-201ENST00000308466 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
MUC4-201ENST00000308466 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
MUC4-201ENST00000308466 PKD2Q13563 968 aa14.58□□□□□ -0.08
MUC4-201ENST00000308466 TMC1Q8TDI8 760 aa14.58□□□□□ -0.08
MUC4-201ENST00000308466 JPH4Q96JJ6 628 aa14.58□□□□□ -0.08
MUC4-201ENST00000308466 NBR1Q14596 966 aa14.56□□□□□ -0.08
MUC4-201ENST00000308466 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
MUC4-201ENST00000308466 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
MUC4-201ENST00000308466 CARD11Q9BXL7 1154 aa14.55□□□□□ -0.08
MUC4-201ENST00000308466 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
MUC4-201ENST00000308466 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
MUC4-201ENST00000308466 EFCAB5A4FU69 1503 aa14.53□□□□□ -0.08
MUC4-201ENST00000308466 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
MUC4-201ENST00000308466 HNRNPMP52272 730 aaKnown RBP eCLIP14.5□□□□□ -0.09
MUC4-201ENST00000308466 MAP3K1Q13233 1512 aa14.5□□□□□ -0.09
MUC4-201ENST00000308466 RTL5Q5HYW3 569 aaPredicted RBP14.5□□□□□ -0.09
MUC4-201ENST00000308466 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
MUC4-201ENST00000308466 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
MUC4-201ENST00000308466 NUP155O75694 1391 aa14.47□□□□□ -0.09
MUC4-201ENST00000308466 HFM1A2PYH4 1435 aa14.47□□□□□ -0.09
MUC4-201ENST00000308466 NAIPQ13075 1403 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms