RNA–Protein interactions for RNA: ENST00000307961.10

RPL4-201, Transcript of ribosomal protein L4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL4, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-201ENST00000307961 NEFLP07196 543 aa15.39■□□□□ 0.05
RPL4-201ENST00000307961 TRIM52Q96A61 297 aa15.38■□□□□ 0.05
RPL4-201ENST00000307961 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
RPL4-201ENST00000307961 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
RPL4-201ENST00000307961 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
RPL4-201ENST00000307961 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
RPL4-201ENST00000307961 ANP32CO43423 234 aa15.33■□□□□ 0.04
RPL4-201ENST00000307961 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
RPL4-201ENST00000307961 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
RPL4-201ENST00000307961 LRRC9Q6ZRR7 1453 aa15.32■□□□□ 0.04
RPL4-201ENST00000307961 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
RPL4-201ENST00000307961 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
RPL4-201ENST00000307961 IGF1RP08069 1367 aa15.3■□□□□ 0.04
RPL4-201ENST00000307961 ATP1B4Q9UN42 357 aaPredicted RBP15.27■□□□□ 0.04
RPL4-201ENST00000307961 CFTRP13569 1480 aa15.26■□□□□ 0.03
RPL4-201ENST00000307961 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
RPL4-201ENST00000307961 P3H3Q8IVL6 736 aa15.25■□□□□ 0.03
RPL4-201ENST00000307961 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
RPL4-201ENST00000307961 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
RPL4-201ENST00000307961 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
RPL4-201ENST00000307961 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
RPL4-201ENST00000307961 MSH5O43196 834 aa15.19■□□□□ 0.02
RPL4-201ENST00000307961 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
RPL4-201ENST00000307961 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
RPL4-201ENST00000307961 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
RPL4-201ENST00000307961 CFAP43Q8NDM7 1665 aa15.13■□□□□ 0.01
RPL4-201ENST00000307961 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
RPL4-201ENST00000307961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.011e-19■□□□□ 9.6
RPL4-201ENST00000307961 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
RPL4-201ENST00000307961 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
RPL4-201ENST00000307961 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
RPL4-201ENST00000307961 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
RPL4-201ENST00000307961 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
RPL4-201ENST00000307961 UACAQ9BZF9 1416 aa15.07■□□□□ 0
RPL4-201ENST00000307961 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
RPL4-201ENST00000307961 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
RPL4-201ENST00000307961 PTPRKQ15262 1439 aa15.06■□□□□ 0
RPL4-201ENST00000307961 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
RPL4-201ENST00000307961 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
RPL4-201ENST00000307961 ERICH6Q7L0X2 663 aa15.04■□□□□ -0
RPL4-201ENST00000307961 HFM1A2PYH4 1435 aa15.04■□□□□ -0
RPL4-201ENST00000307961 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
RPL4-201ENST00000307961 MTUS2Q5JR59 1369 aa15.02□□□□□ -0.01
RPL4-201ENST00000307961 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
RPL4-201ENST00000307961 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.011e-11■■■■■ 78.3
RPL4-201ENST00000307961 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
RPL4-201ENST00000307961 NAIPQ13075 1403 aa15□□□□□ -0.01
RPL4-201ENST00000307961 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 CCDC184Q52MB2 194 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 PPP4R2Q9NY27 417 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 ERICH6BQ5W0A0 696 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 KDM5BQ9UGL1 1544 aa14.99□□□□□ -0.01
RPL4-201ENST00000307961 FMN1Q68DA7 1419 aa14.97□□□□□ -0.01
RPL4-201ENST00000307961 EIF4G2P78344 907 aaKnown RBP eCLIP14.96□□□□□ -0.02
RPL4-201ENST00000307961 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
RPL4-201ENST00000307961 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
RPL4-201ENST00000307961 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
RPL4-201ENST00000307961 B4GALNT3Q6L9W6 998 aa14.94□□□□□ -0.02
RPL4-201ENST00000307961 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
RPL4-201ENST00000307961 MYOM3Q5VTT5 1437 aa14.93□□□□□ -0.02
RPL4-201ENST00000307961 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
RPL4-201ENST00000307961 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
RPL4-201ENST00000307961 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
RPL4-201ENST00000307961 C11orf95C9JLR9 678 aaPredicted RBP14.91□□□□□ -0.02
RPL4-201ENST00000307961 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
RPL4-201ENST00000307961 MRS2Q9HD23 443 aa14.9□□□□□ -0.02
RPL4-201ENST00000307961 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
RPL4-201ENST00000307961 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
RPL4-201ENST00000307961 L3MBTL2Q969R5 705 aa14.88□□□□□ -0.03
RPL4-201ENST00000307961 ZBED9Q6R2W3 1325 aa14.87□□□□□ -0.03
RPL4-201ENST00000307961 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
RPL4-201ENST00000307961 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
RPL4-201ENST00000307961 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
RPL4-201ENST00000307961 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
RPL4-201ENST00000307961 FOXD1Q16676 465 aa14.85□□□□□ -0.03
RPL4-201ENST00000307961 MPHOSPH9Q99550 1183 aa14.85□□□□□ -0.03
RPL4-201ENST00000307961 MYT1LQ9UL68 1186 aa14.84□□□□□ -0.03
RPL4-201ENST00000307961 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
RPL4-201ENST00000307961 CUL7Q14999 1698 aa14.84□□□□□ -0.03
RPL4-201ENST00000307961 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.04
RPL4-201ENST00000307961 GRIN2BQ13224 1484 aa14.83□□□□□ -0.04
RPL4-201ENST00000307961 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
RPL4-201ENST00000307961 DEKP35659 375 aaKnown RBP14.83□□□□□ -0.04
RPL4-201ENST00000307961 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
RPL4-201ENST00000307961 SUPT6HQ7KZ85 1726 aaKnown RBP14.82□□□□□ -0.04
RPL4-201ENST00000307961 EHBP1L1Q8N3D4 1523 aa14.8□□□□□ -0.04
RPL4-201ENST00000307961 UGGT2Q9NYU1 1516 aa14.8□□□□□ -0.04
RPL4-201ENST00000307961 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
RPL4-201ENST00000307961 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
RPL4-201ENST00000307961 SAMD9Q5K651 1589 aa14.78□□□□□ -0.04
RPL4-201ENST00000307961 KIF7Q2M1P5 1343 aa14.78□□□□□ -0.04
RPL4-201ENST00000307961 KDM6BO15054 1643 aa14.78□□□□□ -0.04
RPL4-201ENST00000307961 HECW1Q76N89 1606 aa14.78□□□□□ -0.04
RPL4-201ENST00000307961 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
RPL4-201ENST00000307961 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
RPL4-201ENST00000307961 NBR1Q14596 966 aa14.77□□□□□ -0.04
RPL4-201ENST00000307961 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.05
RPL4-201ENST00000307961 ARHGEF11O15085 1522 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms