RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
LDB2-201ENST00000304523 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.25
LDB2-201ENST00000304523 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
LDB2-201ENST00000304523 ITGAEP38570 1179 aa13.44□□□□□ -0.26
LDB2-201ENST00000304523 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
LDB2-201ENST00000304523 CCER2I3L3R5 266 aa13.42□□□□□ -0.26
LDB2-201ENST00000304523 FKBP8Q14318 412 aa13.42□□□□□ -0.26
LDB2-201ENST00000304523 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
LDB2-201ENST00000304523 IGF1RP08069 1367 aa13.41□□□□□ -0.26
LDB2-201ENST00000304523 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
LDB2-201ENST00000304523 BCANQ96GW7 911 aa13.38□□□□□ -0.27
LDB2-201ENST00000304523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
LDB2-201ENST00000304523 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
LDB2-201ENST00000304523 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
LDB2-201ENST00000304523 NEFLP07196 543 aa13.36□□□□□ -0.27
LDB2-201ENST00000304523 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
LDB2-201ENST00000304523 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
LDB2-201ENST00000304523 FYCO1Q9BQS8 1478 aa13.32□□□□□ -0.28
LDB2-201ENST00000304523 ANP32CO43423 234 aa13.32□□□□□ -0.28
LDB2-201ENST00000304523 FAM50AQ14320 339 aaKnown RBP13.31□□□□□ -0.28
LDB2-201ENST00000304523 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.28
LDB2-201ENST00000304523 BCL11AQ9H165 835 aa13.3□□□□□ -0.28
LDB2-201ENST00000304523 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
LDB2-201ENST00000304523 EFCAB5A4FU69 1503 aa13.29□□□□□ -0.28
LDB2-201ENST00000304523 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
LDB2-201ENST00000304523 CASKIN1Q8WXD9 1431 aa13.27□□□□□ -0.28
LDB2-201ENST00000304523 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
LDB2-201ENST00000304523 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
LDB2-201ENST00000304523 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
LDB2-201ENST00000304523 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
LDB2-201ENST00000304523 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
LDB2-201ENST00000304523 HIRIP3Q9BW71 556 aaPredicted RBP13.24□□□□□ -0.29
LDB2-201ENST00000304523 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
LDB2-201ENST00000304523 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
LDB2-201ENST00000304523 CTTNBP2Q8WZ74 1663 aa13.23□□□□□ -0.29
LDB2-201ENST00000304523 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
LDB2-201ENST00000304523 CADPSQ9ULU8 1353 aa13.22□□□□□ -0.29
LDB2-201ENST00000304523 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.3
LDB2-201ENST00000304523 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.3
LDB2-201ENST00000304523 CUL7Q14999 1698 aa13.2□□□□□ -0.3
LDB2-201ENST00000304523 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
LDB2-201ENST00000304523 MSH5O43196 834 aa13.19□□□□□ -0.3
LDB2-201ENST00000304523 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
LDB2-201ENST00000304523 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
LDB2-201ENST00000304523 ABCA10Q8WWZ4 1543 aa13.17□□□□□ -0.3
LDB2-201ENST00000304523 NAIPQ13075 1403 aa13.17□□□□□ -0.3
LDB2-201ENST00000304523 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
LDB2-201ENST00000304523 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
LDB2-201ENST00000304523 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
LDB2-201ENST00000304523 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
LDB2-201ENST00000304523 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
LDB2-201ENST00000304523 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
LDB2-201ENST00000304523 SAMD9Q5K651 1589 aa13.13□□□□□ -0.31
LDB2-201ENST00000304523 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
LDB2-201ENST00000304523 MYOM3Q5VTT5 1437 aa13.12□□□□□ -0.31
LDB2-201ENST00000304523 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
LDB2-201ENST00000304523 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
LDB2-201ENST00000304523 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
LDB2-201ENST00000304523 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
LDB2-201ENST00000304523 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
LDB2-201ENST00000304523 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
LDB2-201ENST00000304523 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
LDB2-201ENST00000304523 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
LDB2-201ENST00000304523 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
LDB2-201ENST00000304523 ARHGEF11O15085 1522 aa13.09□□□□□ -0.31
LDB2-201ENST00000304523 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
LDB2-201ENST00000304523 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
LDB2-201ENST00000304523 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
LDB2-201ENST00000304523 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
LDB2-201ENST00000304523 CNTLNQ9NXG0 1405 aa13.08□□□□□ -0.32
LDB2-201ENST00000304523 UGGT2Q9NYU1 1516 aa13.07□□□□□ -0.32
LDB2-201ENST00000304523 KIF21AQ7Z4S6 1674 aa13.07□□□□□ -0.32
LDB2-201ENST00000304523 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
LDB2-201ENST00000304523 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
LDB2-201ENST00000304523 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
LDB2-201ENST00000304523 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
LDB2-201ENST00000304523 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
LDB2-201ENST00000304523 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
LDB2-201ENST00000304523 IRX6P78412 446 aaPredicted RBP13.04□□□□□ -0.32
LDB2-201ENST00000304523 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
LDB2-201ENST00000304523 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
LDB2-201ENST00000304523 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.32
LDB2-201ENST00000304523 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.33
LDB2-201ENST00000304523 ZBED9Q6R2W3 1325 aa13.01□□□□□ -0.33
LDB2-201ENST00000304523 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
LDB2-201ENST00000304523 MAGI3Q5TCQ9 1506 aa13.01□□□□□ -0.33
LDB2-201ENST00000304523 KDM6BO15054 1643 aa13□□□□□ -0.33
LDB2-201ENST00000304523 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
LDB2-201ENST00000304523 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
LDB2-201ENST00000304523 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
LDB2-201ENST00000304523 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
LDB2-201ENST00000304523 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
LDB2-201ENST00000304523 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
LDB2-201ENST00000304523 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
LDB2-201ENST00000304523 SPATA31E1Q6ZUB1 1445 aa12.94□□□□□ -0.34
LDB2-201ENST00000304523 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
LDB2-201ENST00000304523 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
LDB2-201ENST00000304523 MPHOSPH9Q99550 1183 aa12.93□□□□□ -0.34
LDB2-201ENST00000304523 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
LDB2-201ENST00000304523 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms