RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 RAB3GAP2Q9H2M9 1393 aa19.54■□□□□ 0.72
CTTN-201ENST00000301843 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
CTTN-201ENST00000301843 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
CTTN-201ENST00000301843 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
CTTN-201ENST00000301843 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
CTTN-201ENST00000301843 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
CTTN-201ENST00000301843 MAP3K1Q13233 1512 aa19.43■□□□□ 0.7
CTTN-201ENST00000301843 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
CTTN-201ENST00000301843 TOPBP1Q92547 1522 aa19.41■□□□□ 0.7
CTTN-201ENST00000301843 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
CTTN-201ENST00000301843 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
CTTN-201ENST00000301843 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
CTTN-201ENST00000301843 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
CTTN-201ENST00000301843 TRIM52Q96A61 297 aa19.4■□□□□ 0.7
CTTN-201ENST00000301843 NESP48681 1621 aa19.4■□□□□ 0.7
CTTN-201ENST00000301843 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.7
CTTN-201ENST00000301843 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
CTTN-201ENST00000301843 FKBP8Q14318 412 aa19.38■□□□□ 0.69
CTTN-201ENST00000301843 MYT1Q01538 1121 aa19.36■□□□□ 0.69
CTTN-201ENST00000301843 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
CTTN-201ENST00000301843 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.69
CTTN-201ENST00000301843 LRRC9Q6ZRR7 1453 aa19.33■□□□□ 0.68
CTTN-201ENST00000301843 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
CTTN-201ENST00000301843 CUL7Q14999 1698 aa19.31■□□□□ 0.68
CTTN-201ENST00000301843 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
CTTN-201ENST00000301843 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
CTTN-201ENST00000301843 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
CTTN-201ENST00000301843 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
CTTN-201ENST00000301843 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.67
CTTN-201ENST00000301843 EFCAB5A4FU69 1503 aa19.26■□□□□ 0.67
CTTN-201ENST00000301843 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
CTTN-201ENST00000301843 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
CTTN-201ENST00000301843 PPP1R15AO75807 674 aaPredicted RBP19.21■□□□□ 0.67
CTTN-201ENST00000301843 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.668e-8■■■■□ 25.6
CTTN-201ENST00000301843 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
CTTN-201ENST00000301843 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
CTTN-201ENST00000301843 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
CTTN-201ENST00000301843 ANP32CO43423 234 aa19.16■□□□□ 0.66
CTTN-201ENST00000301843 PDS5BQ9NTI5 1447 aa19.16■□□□□ 0.66
CTTN-201ENST00000301843 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
CTTN-201ENST00000301843 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.66
CTTN-201ENST00000301843 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
CTTN-201ENST00000301843 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
CTTN-201ENST00000301843 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
CTTN-201ENST00000301843 NEFLP07196 543 aa19.12■□□□□ 0.65
CTTN-201ENST00000301843 TONSLQ96HA7 1378 aa19.11■□□□□ 0.65
CTTN-201ENST00000301843 SNAPC4Q5SXM2 1469 aa19.1■□□□□ 0.65
CTTN-201ENST00000301843 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
CTTN-201ENST00000301843 KIF21AQ7Z4S6 1674 aa19.1■□□□□ 0.65
CTTN-201ENST00000301843 SAMD9Q5K651 1589 aa19.1■□□□□ 0.65
CTTN-201ENST00000301843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.643e-7■■■□□ 14.8
CTTN-201ENST00000301843 RRP7BPQ9NSQ0 103 aa19.08■□□□□ 0.64
CTTN-201ENST00000301843 CNGB1Q14028 1251 aaPredicted RBP19.06■□□□□ 0.64
CTTN-201ENST00000301843 ANP32EQ9BTT0 268 aa19.06■□□□□ 0.64
CTTN-201ENST00000301843 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
CTTN-201ENST00000301843 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
CTTN-201ENST00000301843 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
CTTN-201ENST00000301843 HNRNPUQ00839 825 aaKnown RBP eCLIP19.04■□□□□ 0.646e-9■□□□□ 10.5
CTTN-201ENST00000301843 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.64
CTTN-201ENST00000301843 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
CTTN-201ENST00000301843 FOXD1Q16676 465 aa19.01■□□□□ 0.63
CTTN-201ENST00000301843 FGD6Q6ZV73 1430 aa19.01■□□□□ 0.63
CTTN-201ENST00000301843 GRIN2BQ13224 1484 aa19■□□□□ 0.63
CTTN-201ENST00000301843 CCDC18Q5T9S5 1454 aa18.99■□□□□ 0.63
CTTN-201ENST00000301843 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
CTTN-201ENST00000301843 SENP3-EIF4A1A0A087X0R7 540 aa18.97■□□□□ 0.63
CTTN-201ENST00000301843 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
CTTN-201ENST00000301843 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
CTTN-201ENST00000301843 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
CTTN-201ENST00000301843 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
CTTN-201ENST00000301843 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
CTTN-201ENST00000301843 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
CTTN-201ENST00000301843 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
CTTN-201ENST00000301843 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
CTTN-201ENST00000301843 MYOM3Q5VTT5 1437 aa18.9■□□□□ 0.62
CTTN-201ENST00000301843 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
CTTN-201ENST00000301843 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
CTTN-201ENST00000301843 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
CTTN-201ENST00000301843 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
CTTN-201ENST00000301843 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
CTTN-201ENST00000301843 NAIPQ13075 1403 aa18.87■□□□□ 0.61
CTTN-201ENST00000301843 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 UACAQ9BZF9 1416 aa18.86■□□□□ 0.61
CTTN-201ENST00000301843 C11orf95C9JLR9 678 aaPredicted RBP18.85■□□□□ 0.61
CTTN-201ENST00000301843 MSH5O43196 834 aa18.84■□□□□ 0.61
CTTN-201ENST00000301843 HECW1Q76N89 1606 aa18.83■□□□□ 0.61
CTTN-201ENST00000301843 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.61
CTTN-201ENST00000301843 L3MBTL2Q969R5 705 aa18.8■□□□□ 0.6
CTTN-201ENST00000301843 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
CTTN-201ENST00000301843 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
CTTN-201ENST00000301843 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTTN-201ENST00000301843 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
CTTN-201ENST00000301843 WDR62O43379 1518 aa18.75■□□□□ 0.59
CTTN-201ENST00000301843 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
CTTN-201ENST00000301843 MPHOSPH9Q99550 1183 aa18.75■□□□□ 0.59
CTTN-201ENST00000301843 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms