RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 RAB3GAP2Q9H2M9 1393 aa20.44■□□□□ 0.86
KDM1B-201ENST00000297792 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
KDM1B-201ENST00000297792 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.86
KDM1B-201ENST00000297792 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
KDM1B-201ENST00000297792 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
KDM1B-201ENST00000297792 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
KDM1B-201ENST00000297792 ANP32CO43423 234 aa20.33■□□□□ 0.85
KDM1B-201ENST00000297792 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
KDM1B-201ENST00000297792 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
KDM1B-201ENST00000297792 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
KDM1B-201ENST00000297792 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
KDM1B-201ENST00000297792 RRBP1Q9P2E9 1410 aaKnown RBP20.28■□□□□ 0.84
KDM1B-201ENST00000297792 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
KDM1B-201ENST00000297792 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
KDM1B-201ENST00000297792 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.83
KDM1B-201ENST00000297792 NESP48681 1621 aa20.26■□□□□ 0.83
KDM1B-201ENST00000297792 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
KDM1B-201ENST00000297792 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
KDM1B-201ENST00000297792 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
KDM1B-201ENST00000297792 TONSLQ96HA7 1378 aa20.18■□□□□ 0.82
KDM1B-201ENST00000297792 HNRNPUQ00839 825 aaKnown RBP eCLIP20.18■□□□□ 0.82
KDM1B-201ENST00000297792 TDRD9Q8NDG6 1382 aaKnown RBP20.16■□□□□ 0.82
KDM1B-201ENST00000297792 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
KDM1B-201ENST00000297792 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.82
KDM1B-201ENST00000297792 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.81
KDM1B-201ENST00000297792 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
KDM1B-201ENST00000297792 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
KDM1B-201ENST00000297792 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
KDM1B-201ENST00000297792 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
KDM1B-201ENST00000297792 ERICH6Q7L0X2 663 aa20.1■□□□□ 0.81
KDM1B-201ENST00000297792 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
KDM1B-201ENST00000297792 POLR3GLQ9BT43 218 aa20.07■□□□□ 0.8
KDM1B-201ENST00000297792 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
KDM1B-201ENST00000297792 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
KDM1B-201ENST00000297792 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
KDM1B-201ENST00000297792 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
KDM1B-201ENST00000297792 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
KDM1B-201ENST00000297792 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
KDM1B-201ENST00000297792 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
KDM1B-201ENST00000297792 TOPBP1Q92547 1522 aa20■□□□□ 0.79
KDM1B-201ENST00000297792 CDK11AQ9UQ88 783 aaPredicted RBP19.96■□□□□ 0.79
KDM1B-201ENST00000297792 FOXD1Q16676 465 aa19.95■□□□□ 0.78
KDM1B-201ENST00000297792 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
KDM1B-201ENST00000297792 BCL11AQ9H165 835 aa19.92■□□□□ 0.78
KDM1B-201ENST00000297792 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
KDM1B-201ENST00000297792 PTPRKQ15262 1439 aa19.9■□□□□ 0.78
KDM1B-201ENST00000297792 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
KDM1B-201ENST00000297792 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
KDM1B-201ENST00000297792 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
KDM1B-201ENST00000297792 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
KDM1B-201ENST00000297792 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
KDM1B-201ENST00000297792 TIMELESSQ9UNS1 1208 aa19.86■□□□□ 0.77
KDM1B-201ENST00000297792 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
KDM1B-201ENST00000297792 FGD6Q6ZV73 1430 aa19.85■□□□□ 0.77
KDM1B-201ENST00000297792 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
KDM1B-201ENST00000297792 B4GALNT3Q6L9W6 998 aa19.84■□□□□ 0.77
KDM1B-201ENST00000297792 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
KDM1B-201ENST00000297792 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
KDM1B-201ENST00000297792 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
KDM1B-201ENST00000297792 FYCO1Q9BQS8 1478 aa19.81■□□□□ 0.76
KDM1B-201ENST00000297792 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
KDM1B-201ENST00000297792 GAPVD1Q14C86 1478 aa19.8■□□□□ 0.76
KDM1B-201ENST00000297792 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
KDM1B-201ENST00000297792 MSH5O43196 834 aa19.79■□□□□ 0.76
KDM1B-201ENST00000297792 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■■■■■ 28
KDM1B-201ENST00000297792 WASHC2AQ641Q2 1341 aa19.77■□□□□ 0.76
KDM1B-201ENST00000297792 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.75
KDM1B-201ENST00000297792 NCOA2Q15596 1464 aa19.76■□□□□ 0.75
KDM1B-201ENST00000297792 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
KDM1B-201ENST00000297792 L3MBTL2Q969R5 705 aa19.73■□□□□ 0.75
KDM1B-201ENST00000297792 FBLN2P98095 1184 aa19.71■□□□□ 0.75
KDM1B-201ENST00000297792 ZNF644Q9H582 1327 aaPredicted RBP19.71■□□□□ 0.75
KDM1B-201ENST00000297792 NBR1Q14596 966 aa19.7■□□□□ 0.74
KDM1B-201ENST00000297792 EFCAB5A4FU69 1503 aa19.69■□□□□ 0.74
KDM1B-201ENST00000297792 NAIPQ13075 1403 aa19.69■□□□□ 0.74
KDM1B-201ENST00000297792 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
KDM1B-201ENST00000297792 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
KDM1B-201ENST00000297792 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
KDM1B-201ENST00000297792 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
KDM1B-201ENST00000297792 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
KDM1B-201ENST00000297792 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
KDM1B-201ENST00000297792 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
KDM1B-201ENST00000297792 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
KDM1B-201ENST00000297792 PPP4R2Q9NY27 417 aa19.65■□□□□ 0.74
KDM1B-201ENST00000297792 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
KDM1B-201ENST00000297792 CDK13Q14004 1512 aaKnown RBP19.64■□□□□ 0.74
KDM1B-201ENST00000297792 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.74
KDM1B-201ENST00000297792 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
KDM1B-201ENST00000297792 CUL7Q14999 1698 aa19.64■□□□□ 0.73
KDM1B-201ENST00000297792 LRRIQ1Q96JM4 1722 aa19.62■□□□□ 0.73
KDM1B-201ENST00000297792 PRKRIP1Q9H875 184 aaPredicted RBP19.61■□□□□ 0.73
KDM1B-201ENST00000297792 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
KDM1B-201ENST00000297792 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
KDM1B-201ENST00000297792 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
KDM1B-201ENST00000297792 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
KDM1B-201ENST00000297792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
KDM1B-201ENST00000297792 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
KDM1B-201ENST00000297792 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
KDM1B-201ENST00000297792 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
KDM1B-201ENST00000297792 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms