RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 SLC4A1APQ9BWU0 796 aaKnown RBP10.19□□□□□ -0.78
DEFB1-201ENST00000297439 CLIP1P30622 1438 aa10.18□□□□□ -0.78
DEFB1-201ENST00000297439 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
DEFB1-201ENST00000297439 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
DEFB1-201ENST00000297439 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
DEFB1-201ENST00000297439 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
DEFB1-201ENST00000297439 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
DEFB1-201ENST00000297439 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
DEFB1-201ENST00000297439 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
DEFB1-201ENST00000297439 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
DEFB1-201ENST00000297439 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
DEFB1-201ENST00000297439 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
DEFB1-201ENST00000297439 ARAP1Q96P48 1450 aa10.06□□□□□ -0.8
DEFB1-201ENST00000297439 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
DEFB1-201ENST00000297439 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
DEFB1-201ENST00000297439 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
DEFB1-201ENST00000297439 AKT1S1Q96B36 256 aa10.01□□□□□ -0.81
DEFB1-201ENST00000297439 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
DEFB1-201ENST00000297439 IGF1RP08069 1367 aa10.01□□□□□ -0.81
DEFB1-201ENST00000297439 FANCD2Q9BXW9 1451 aa10□□□□□ -0.81
DEFB1-201ENST00000297439 CCER1Q8TC90 406 aaPredicted RBP10□□□□□ -0.81
DEFB1-201ENST00000297439 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
DEFB1-201ENST00000297439 CUX2O14529 1486 aa9.99□□□□□ -0.81
DEFB1-201ENST00000297439 ABCA10Q8WWZ4 1543 aa9.99□□□□□ -0.81
DEFB1-201ENST00000297439 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
DEFB1-201ENST00000297439 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
DEFB1-201ENST00000297439 RRBP1Q9P2E9 1410 aaKnown RBP9.98□□□□□ -0.81
DEFB1-201ENST00000297439 CUL7Q14999 1698 aa9.96□□□□□ -0.82
DEFB1-201ENST00000297439 CARMIL1Q5VZK9 1371 aa9.95□□□□□ -0.82
DEFB1-201ENST00000297439 TOPBP1Q92547 1522 aa9.95□□□□□ -0.82
DEFB1-201ENST00000297439 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
DEFB1-201ENST00000297439 WDR97A6NE52 1622 aa9.93□□□□□ -0.82
DEFB1-201ENST00000297439 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
DEFB1-201ENST00000297439 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
DEFB1-201ENST00000297439 AQRO60306 1485 aaKnown RBP eCLIP9.91□□□□□ -0.82
DEFB1-201ENST00000297439 FHAD1B1AJZ9 1412 aa9.91□□□□□ -0.82
DEFB1-201ENST00000297439 ZBTB22O15209 634 aa9.91□□□□□ -0.82
DEFB1-201ENST00000297439 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
DEFB1-201ENST00000297439 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.82
DEFB1-201ENST00000297439 CFAP43Q8NDM7 1665 aa9.88□□□□□ -0.83
DEFB1-201ENST00000297439 ABCA5Q8WWZ7 1642 aa9.88□□□□□ -0.83
DEFB1-201ENST00000297439 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
DEFB1-201ENST00000297439 ATXN8OSP0DMR3 200 aa9.87□□□□□ -0.83
DEFB1-201ENST00000297439 FYCO1Q9BQS8 1478 aa9.86□□□□□ -0.83
DEFB1-201ENST00000297439 CTTNBP2Q8WZ74 1663 aa9.86□□□□□ -0.83
DEFB1-201ENST00000297439 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
DEFB1-201ENST00000297439 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
DEFB1-201ENST00000297439 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
DEFB1-201ENST00000297439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.84□□□□□ -0.83
DEFB1-201ENST00000297439 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
DEFB1-201ENST00000297439 NESP48681 1621 aa9.83□□□□□ -0.84
DEFB1-201ENST00000297439 RAD54L2Q9Y4B4 1467 aa9.83□□□□□ -0.84
DEFB1-201ENST00000297439 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
DEFB1-201ENST00000297439 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
DEFB1-201ENST00000297439 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
DEFB1-201ENST00000297439 PIP4P2Q8N4L2 257 aa9.82□□□□□ -0.84
DEFB1-201ENST00000297439 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
DEFB1-201ENST00000297439 SAMD9Q5K651 1589 aa9.82□□□□□ -0.84
DEFB1-201ENST00000297439 PCF11O94913 1555 aaKnown RBP9.81□□□□□ -0.84
DEFB1-201ENST00000297439 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
DEFB1-201ENST00000297439 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
DEFB1-201ENST00000297439 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
DEFB1-201ENST00000297439 SP7Q8TDD2 431 aaPredicted RBP9.8□□□□□ -0.84
DEFB1-201ENST00000297439 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
DEFB1-201ENST00000297439 PITPNM1O00562 1244 aa9.79□□□□□ -0.84
DEFB1-201ENST00000297439 DIEXFQ68CQ4 756 aaKnown RBP9.79□□□□□ -0.84
DEFB1-201ENST00000297439 GAPVD1Q14C86 1478 aa9.79□□□□□ -0.84
DEFB1-201ENST00000297439 SNAPC4Q5SXM2 1469 aa9.78□□□□□ -0.84
DEFB1-201ENST00000297439 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
DEFB1-201ENST00000297439 FBLN2P98095 1184 aa9.74□□□□□ -0.85
DEFB1-201ENST00000297439 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
DEFB1-201ENST00000297439 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
DEFB1-201ENST00000297439 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
DEFB1-201ENST00000297439 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
DEFB1-201ENST00000297439 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
DEFB1-201ENST00000297439 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
DEFB1-201ENST00000297439 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
DEFB1-201ENST00000297439 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
DEFB1-201ENST00000297439 ADAMTS12P58397 1594 aa9.71□□□□□ -0.85
DEFB1-201ENST00000297439 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.86
DEFB1-201ENST00000297439 PBRM1Q86U86 1689 aa9.71□□□□□ -0.86
DEFB1-201ENST00000297439 CCDC18Q5T9S5 1454 aa9.7□□□□□ -0.86
DEFB1-201ENST00000297439 ARHGEF11O15085 1522 aa9.7□□□□□ -0.86
DEFB1-201ENST00000297439 WDR62O43379 1518 aa9.7□□□□□ -0.86
DEFB1-201ENST00000297439 EHBP1L1Q8N3D4 1523 aa9.7□□□□□ -0.86
DEFB1-201ENST00000297439 HAX1O00165 279 aa9.69□□□□□ -0.86
DEFB1-201ENST00000297439 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
DEFB1-201ENST00000297439 TDRD9Q8NDG6 1382 aaKnown RBP9.69□□□□□ -0.86
DEFB1-201ENST00000297439 RAB3GAP2Q9H2M9 1393 aa9.69□□□□□ -0.86
DEFB1-201ENST00000297439 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
DEFB1-201ENST00000297439 IFT140Q96RY7 1462 aa9.68□□□□□ -0.86
DEFB1-201ENST00000297439 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
DEFB1-201ENST00000297439 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
DEFB1-201ENST00000297439 IQGAP2Q13576 1575 aa9.67□□□□□ -0.86
DEFB1-201ENST00000297439 UGGT2Q9NYU1 1516 aa9.67□□□□□ -0.86
DEFB1-201ENST00000297439 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
DEFB1-201ENST00000297439 HECW1Q76N89 1606 aa9.67□□□□□ -0.86
DEFB1-201ENST00000297439 AKNAQ7Z591 1439 aa9.65□□□□□ -0.86
DEFB1-201ENST00000297439 SUPT6HQ7KZ85 1726 aaKnown RBP9.65□□□□□ -0.86
DEFB1-201ENST00000297439 TCOF1Q13428 1488 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms