RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
RPN1-201ENST00000296255 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
RPN1-201ENST00000296255 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
RPN1-201ENST00000296255 CFAP43Q8NDM7 1665 aa24.27■■□□□ 1.47
RPN1-201ENST00000296255 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
RPN1-201ENST00000296255 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
RPN1-201ENST00000296255 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
RPN1-201ENST00000296255 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
RPN1-201ENST00000296255 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
RPN1-201ENST00000296255 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
RPN1-201ENST00000296255 SETD5Q9C0A6 1442 aa24.21■■□□□ 1.47
RPN1-201ENST00000296255 FHOD3Q2V2M9 1422 aa24.17■■□□□ 1.46
RPN1-201ENST00000296255 NESP48681 1621 aa24.17■■□□□ 1.46
RPN1-201ENST00000296255 FAM50AQ14320 339 aaKnown RBP24.14■■□□□ 1.45
RPN1-201ENST00000296255 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
RPN1-201ENST00000296255 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
RPN1-201ENST00000296255 CUL7Q14999 1698 aa24.12■■□□□ 1.45
RPN1-201ENST00000296255 ATP1B4Q9UN42 357 aaPredicted RBP24.11■■□□□ 1.45
RPN1-201ENST00000296255 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
RPN1-201ENST00000296255 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
RPN1-201ENST00000296255 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.451e-6■■■■□ 25.2
RPN1-201ENST00000296255 WDR97A6NE52 1622 aa24.04■■□□□ 1.44
RPN1-201ENST00000296255 SIN3AQ96ST3 1273 aa24.04■■□□□ 1.44
RPN1-201ENST00000296255 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
RPN1-201ENST00000296255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
RPN1-201ENST00000296255 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
RPN1-201ENST00000296255 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
RPN1-201ENST00000296255 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
RPN1-201ENST00000296255 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
RPN1-201ENST00000296255 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
RPN1-201ENST00000296255 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
RPN1-201ENST00000296255 SAMD9Q5K651 1589 aa23.92■■□□□ 1.42
RPN1-201ENST00000296255 LRRIQ1Q96JM4 1722 aa23.91■■□□□ 1.42
RPN1-201ENST00000296255 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
RPN1-201ENST00000296255 TIMELESSQ9UNS1 1208 aa23.89■■□□□ 1.41
RPN1-201ENST00000296255 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
RPN1-201ENST00000296255 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
RPN1-201ENST00000296255 SUPT16HQ9Y5B9 1047 aaKnown RBP23.85■■□□□ 1.41
RPN1-201ENST00000296255 MTUS2Q5JR59 1369 aa23.85■■□□□ 1.41
RPN1-201ENST00000296255 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
RPN1-201ENST00000296255 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.4
RPN1-201ENST00000296255 DDX10Q13206 875 aaKnown RBP23.83■■□□□ 1.4
RPN1-201ENST00000296255 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
RPN1-201ENST00000296255 NCOA2Q15596 1464 aa23.8■■□□□ 1.4
RPN1-201ENST00000296255 HFM1A2PYH4 1435 aa23.79■■□□□ 1.4
RPN1-201ENST00000296255 PTPN23Q9H3S7 1636 aa23.79■■□□□ 1.4
RPN1-201ENST00000296255 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
RPN1-201ENST00000296255 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
RPN1-201ENST00000296255 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
RPN1-201ENST00000296255 MYOM3Q5VTT5 1437 aa23.77■■□□□ 1.4
RPN1-201ENST00000296255 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
RPN1-201ENST00000296255 HIRIP3Q9BW71 556 aaPredicted RBP23.75■■□□□ 1.39
RPN1-201ENST00000296255 SUPT6HQ7KZ85 1726 aaKnown RBP23.74■■□□□ 1.39
RPN1-201ENST00000296255 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
RPN1-201ENST00000296255 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
RPN1-201ENST00000296255 NAIPQ13075 1403 aa23.73■■□□□ 1.39
RPN1-201ENST00000296255 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
RPN1-201ENST00000296255 MAGI3Q5TCQ9 1506 aa23.71■■□□□ 1.39
RPN1-201ENST00000296255 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
RPN1-201ENST00000296255 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
RPN1-201ENST00000296255 TONSLQ96HA7 1378 aa23.69■■□□□ 1.38
RPN1-201ENST00000296255 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
RPN1-201ENST00000296255 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
RPN1-201ENST00000296255 TCOF1Q13428 1488 aaKnown RBP23.59■■□□□ 1.37
RPN1-201ENST00000296255 HECW1Q76N89 1606 aa23.58■■□□□ 1.37
RPN1-201ENST00000296255 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
RPN1-201ENST00000296255 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
RPN1-201ENST00000296255 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
RPN1-201ENST00000296255 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
RPN1-201ENST00000296255 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
RPN1-201ENST00000296255 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
RPN1-201ENST00000296255 ANP32CO43423 234 aa23.54■■□□□ 1.36
RPN1-201ENST00000296255 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
RPN1-201ENST00000296255 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
RPN1-201ENST00000296255 CDK13Q14004 1512 aaKnown RBP23.52■■□□□ 1.36
RPN1-201ENST00000296255 KDM6BO15054 1643 aa23.51■■□□□ 1.35
RPN1-201ENST00000296255 WDR62O43379 1518 aa23.5■■□□□ 1.35
RPN1-201ENST00000296255 AKNAQ7Z591 1439 aa23.48■■□□□ 1.35
RPN1-201ENST00000296255 TSHZ2Q9NRE2 1034 aa23.47■■□□□ 1.35
RPN1-201ENST00000296255 MIA2Q96PC5 1412 aa23.45■■□□□ 1.35
RPN1-201ENST00000296255 MYT1Q01538 1121 aa23.45■■□□□ 1.34
RPN1-201ENST00000296255 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
RPN1-201ENST00000296255 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
RPN1-201ENST00000296255 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
RPN1-201ENST00000296255 FKBP8Q14318 412 aa23.43■■□□□ 1.34
RPN1-201ENST00000296255 BCANQ96GW7 911 aa23.41■■□□□ 1.34
RPN1-201ENST00000296255 MPHOSPH9Q99550 1183 aa23.38■■□□□ 1.33
RPN1-201ENST00000296255 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
RPN1-201ENST00000296255 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
RPN1-201ENST00000296255 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
RPN1-201ENST00000296255 DISP1Q96F81 1524 aa23.34■■□□□ 1.33
RPN1-201ENST00000296255 KIAA0556O60303 1618 aa23.33■■□□□ 1.33
RPN1-201ENST00000296255 FOXD1Q16676 465 aa23.32■■□□□ 1.32
RPN1-201ENST00000296255 DAPK1P53355 1430 aa23.32■■□□□ 1.32
RPN1-201ENST00000296255 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
RPN1-201ENST00000296255 KIAA0586Q9BVV6 1533 aa23.31■■□□□ 1.32
RPN1-201ENST00000296255 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
RPN1-201ENST00000296255 L3MBTL2Q969R5 705 aa23.3■■□□□ 1.32
RPN1-201ENST00000296255 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
RPN1-201ENST00000296255 ABCC5O15440 1437 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms