RNA–Protein interactions for RNA: ENST00000296027.4

CXCL5-201, Transcript of C-X-C motif chemokine ligand 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL5, Length 2,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5-201ENST00000296027 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
CXCL5-201ENST00000296027 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
CXCL5-201ENST00000296027 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
CXCL5-201ENST00000296027 RAB3GAP2Q9H2M9 1393 aa19.24■□□□□ 0.67
CXCL5-201ENST00000296027 TIAM1Q13009 1591 aa19.24■□□□□ 0.67
CXCL5-201ENST00000296027 FAM50AQ14320 339 aaKnown RBP19.23■□□□□ 0.67
CXCL5-201ENST00000296027 NESP48681 1621 aa19.23■□□□□ 0.67
CXCL5-201ENST00000296027 PHLDB1Q86UU1 1377 aa19.23■□□□□ 0.67
CXCL5-201ENST00000296027 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
CXCL5-201ENST00000296027 LRRC9Q6ZRR7 1453 aa19.22■□□□□ 0.67
CXCL5-201ENST00000296027 DAXXQ9UER7 740 aaPredicted RBP19.2■□□□□ 0.66
CXCL5-201ENST00000296027 FHOD3Q2V2M9 1422 aa19.18■□□□□ 0.66
CXCL5-201ENST00000296027 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
CXCL5-201ENST00000296027 MAP3K1Q13233 1512 aa19.18■□□□□ 0.66
CXCL5-201ENST00000296027 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
CXCL5-201ENST00000296027 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
CXCL5-201ENST00000296027 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
CXCL5-201ENST00000296027 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
CXCL5-201ENST00000296027 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
CXCL5-201ENST00000296027 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
CXCL5-201ENST00000296027 SIN3AQ96ST3 1273 aa19.12■□□□□ 0.65
CXCL5-201ENST00000296027 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
CXCL5-201ENST00000296027 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.64
CXCL5-201ENST00000296027 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
CXCL5-201ENST00000296027 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
CXCL5-201ENST00000296027 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
CXCL5-201ENST00000296027 CFAP43Q8NDM7 1665 aa19.01■□□□□ 0.63
CXCL5-201ENST00000296027 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
CXCL5-201ENST00000296027 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
CXCL5-201ENST00000296027 CUL7Q14999 1698 aa18.96■□□□□ 0.63
CXCL5-201ENST00000296027 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
CXCL5-201ENST00000296027 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
CXCL5-201ENST00000296027 AQRO60306 1485 aaKnown RBP eCLIP18.95■□□□□ 0.62
CXCL5-201ENST00000296027 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
CXCL5-201ENST00000296027 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
CXCL5-201ENST00000296027 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
CXCL5-201ENST00000296027 GAPVD1Q14C86 1478 aa18.93■□□□□ 0.62
CXCL5-201ENST00000296027 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
CXCL5-201ENST00000296027 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
CXCL5-201ENST00000296027 FGD6Q6ZV73 1430 aa18.92■□□□□ 0.62
CXCL5-201ENST00000296027 CTTNBP2Q8WZ74 1663 aa18.91■□□□□ 0.62
CXCL5-201ENST00000296027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
CXCL5-201ENST00000296027 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
CXCL5-201ENST00000296027 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
CXCL5-201ENST00000296027 PPP1R15AO75807 674 aaPredicted RBP18.88■□□□□ 0.61
CXCL5-201ENST00000296027 ABCA5Q8WWZ7 1642 aa18.85■□□□□ 0.61
CXCL5-201ENST00000296027 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
CXCL5-201ENST00000296027 SUPT16HQ9Y5B9 1047 aaKnown RBP18.82■□□□□ 0.6
CXCL5-201ENST00000296027 NCOA2Q15596 1464 aa18.82■□□□□ 0.6
CXCL5-201ENST00000296027 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
CXCL5-201ENST00000296027 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
CXCL5-201ENST00000296027 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
CXCL5-201ENST00000296027 CCDC18Q5T9S5 1454 aa18.8■□□□□ 0.6
CXCL5-201ENST00000296027 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
CXCL5-201ENST00000296027 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
CXCL5-201ENST00000296027 LRRIQ1Q96JM4 1722 aa18.78■□□□□ 0.6
CXCL5-201ENST00000296027 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
CXCL5-201ENST00000296027 TONSLQ96HA7 1378 aa18.77■□□□□ 0.59
CXCL5-201ENST00000296027 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
CXCL5-201ENST00000296027 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
CXCL5-201ENST00000296027 NAIPQ13075 1403 aa18.75■□□□□ 0.59
CXCL5-201ENST00000296027 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CXCL5-201ENST00000296027 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
CXCL5-201ENST00000296027 TARBP1Q13395 1621 aaKnown RBP18.72■□□□□ 0.59
CXCL5-201ENST00000296027 MAGI3Q5TCQ9 1506 aa18.72■□□□□ 0.59
CXCL5-201ENST00000296027 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
CXCL5-201ENST00000296027 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
CXCL5-201ENST00000296027 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
CXCL5-201ENST00000296027 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
CXCL5-201ENST00000296027 UGGT2Q9NYU1 1516 aa18.67■□□□□ 0.58
CXCL5-201ENST00000296027 ANP32CO43423 234 aa18.66■□□□□ 0.58
CXCL5-201ENST00000296027 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
CXCL5-201ENST00000296027 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
CXCL5-201ENST00000296027 CDK13Q14004 1512 aaKnown RBP18.63■□□□□ 0.57
CXCL5-201ENST00000296027 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
CXCL5-201ENST00000296027 IQGAP2Q13576 1575 aa18.61■□□□□ 0.57
CXCL5-201ENST00000296027 FOXD1Q16676 465 aa18.6■□□□□ 0.57
CXCL5-201ENST00000296027 BCANQ96GW7 911 aa18.6■□□□□ 0.57
CXCL5-201ENST00000296027 CCER2I3L3R5 266 aa18.58■□□□□ 0.57
CXCL5-201ENST00000296027 PBRM1Q86U86 1689 aa18.58■□□□□ 0.56
CXCL5-201ENST00000296027 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
CXCL5-201ENST00000296027 HECW1Q76N89 1606 aa18.57■□□□□ 0.56
CXCL5-201ENST00000296027 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
CXCL5-201ENST00000296027 TCOF1Q13428 1488 aaKnown RBP18.56■□□□□ 0.56
CXCL5-201ENST00000296027 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
CXCL5-201ENST00000296027 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
CXCL5-201ENST00000296027 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
CXCL5-201ENST00000296027 FKBP8Q14318 412 aa18.56■□□□□ 0.56
CXCL5-201ENST00000296027 KDM5BQ9UGL1 1544 aa18.55■□□□□ 0.56
CXCL5-201ENST00000296027 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
CXCL5-201ENST00000296027 KDM6BO15054 1643 aa18.55■□□□□ 0.56
CXCL5-201ENST00000296027 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
CXCL5-201ENST00000296027 WDR62O43379 1518 aa18.52■□□□□ 0.55
CXCL5-201ENST00000296027 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
CXCL5-201ENST00000296027 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
CXCL5-201ENST00000296027 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
CXCL5-201ENST00000296027 TSHZ2Q9NRE2 1034 aa18.49■□□□□ 0.55
CXCL5-201ENST00000296027 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
CXCL5-201ENST00000296027 IFT140Q96RY7 1462 aa18.46■□□□□ 0.55
CXCL5-201ENST00000296027 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms