RNA–Protein interactions for RNA: ENST00000289228.6

ACTR1B-201, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1B, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-201ENST00000289228 DNMBPQ6XZF7 1577 aa32.93■■■□□ 2.86
ACTR1B-201ENST00000289228 CFAP43Q8NDM7 1665 aa32.89■■■□□ 2.86
ACTR1B-201ENST00000289228 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
ACTR1B-201ENST00000289228 PCF11O94913 1555 aaKnown RBP32.87■■■□□ 2.85
ACTR1B-201ENST00000289228 RAD54L2Q9Y4B4 1467 aa32.87■■■□□ 2.85
ACTR1B-201ENST00000289228 PHLDB1Q86UU1 1377 aa32.86■■■□□ 2.85
ACTR1B-201ENST00000289228 TOPBP1Q92547 1522 aa32.84■■■□□ 2.85
ACTR1B-201ENST00000289228 P3H3Q8IVL6 736 aa32.83■■■□□ 2.85
ACTR1B-201ENST00000289228 SETD5Q9C0A6 1442 aa32.83■■■□□ 2.85
ACTR1B-201ENST00000289228 POLA1P09884 1462 aaPredicted RBP32.83■■■□□ 2.85
ACTR1B-201ENST00000289228 MAPKBP1O60336 1514 aa32.82■■■□□ 2.84
ACTR1B-201ENST00000289228 EFCAB5A4FU69 1503 aa32.77■■■□□ 2.84
ACTR1B-201ENST00000289228 FHOD3Q2V2M9 1422 aa32.76■■■□□ 2.84
ACTR1B-201ENST00000289228 CUL7Q14999 1698 aa32.76■■■□□ 2.84
ACTR1B-201ENST00000289228 FAM50AQ14320 339 aaKnown RBP32.75■■■□□ 2.83
ACTR1B-201ENST00000289228 ATP1B4Q9UN42 357 aaPredicted RBP32.75■■■□□ 2.83
ACTR1B-201ENST00000289228 FYCO1Q9BQS8 1478 aa32.74■■■□□ 2.83
ACTR1B-201ENST00000289228 NESP48681 1621 aa32.73■■■□□ 2.83
ACTR1B-201ENST00000289228 CTTNBP2Q8WZ74 1663 aa32.7■■■□□ 2.83
ACTR1B-201ENST00000289228 CASKIN1Q8WXD9 1431 aa32.69■■■□□ 2.82
ACTR1B-201ENST00000289228 AQRO60306 1485 aaKnown RBP eCLIP32.68■■■□□ 2.821e-8■■■■□ 21.7
ACTR1B-201ENST00000289228 WDR97A6NE52 1622 aa32.58■■■□□ 2.81
ACTR1B-201ENST00000289228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.57■■■□□ 2.86e-10■□□□□ 10.5
ACTR1B-201ENST00000289228 FMN1Q68DA7 1419 aa32.56■■■□□ 2.8
ACTR1B-201ENST00000289228 LAMC3Q9Y6N6 1575 aa32.56■■■□□ 2.8
ACTR1B-201ENST00000289228 URB2Q14146 1524 aaKnown RBP32.55■■■□□ 2.8
ACTR1B-201ENST00000289228 SIN3AQ96ST3 1273 aa32.52■■■□□ 2.8
ACTR1B-201ENST00000289228 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
ACTR1B-201ENST00000289228 ABCA5Q8WWZ7 1642 aa32.47■■■□□ 2.79
ACTR1B-201ENST00000289228 TIMELESSQ9UNS1 1208 aa32.46■■■□□ 2.79
ACTR1B-201ENST00000289228 FGD6Q6ZV73 1430 aa32.44■■■□□ 2.78
ACTR1B-201ENST00000289228 TDRD9Q8NDG6 1382 aaKnown RBP32.43■■■□□ 2.78
ACTR1B-201ENST00000289228 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
ACTR1B-201ENST00000289228 GAPVD1Q14C86 1478 aa32.4■■■□□ 2.78
ACTR1B-201ENST00000289228 MTUS2Q5JR59 1369 aa32.4■■■□□ 2.78
ACTR1B-201ENST00000289228 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
ACTR1B-201ENST00000289228 LRRIQ1Q96JM4 1722 aa32.33■■■□□ 2.77
ACTR1B-201ENST00000289228 GRIN2BQ13224 1484 aa32.31■■■□□ 2.76
ACTR1B-201ENST00000289228 PPP1R15AO75807 674 aaPredicted RBP32.28■■■□□ 2.76
ACTR1B-201ENST00000289228 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
ACTR1B-201ENST00000289228 CCDC18Q5T9S5 1454 aa32.28■■■□□ 2.76
ACTR1B-201ENST00000289228 DDX10Q13206 875 aaKnown RBP32.27■■■□□ 2.76
ACTR1B-201ENST00000289228 SUPT16HQ9Y5B9 1047 aaKnown RBP32.27■■■□□ 2.76
ACTR1B-201ENST00000289228 NCOA2Q15596 1464 aa32.26■■■□□ 2.76
ACTR1B-201ENST00000289228 HFM1A2PYH4 1435 aa32.25■■■□□ 2.75
ACTR1B-201ENST00000289228 KCNH8Q96L42 1107 aa32.25■■■□□ 2.75
ACTR1B-201ENST00000289228 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
ACTR1B-201ENST00000289228 MYOM3Q5VTT5 1437 aa32.23■■■□□ 2.75
ACTR1B-201ENST00000289228 PTPN23Q9H3S7 1636 aa32.23■■■□□ 2.75
ACTR1B-201ENST00000289228 SUPT6HQ7KZ85 1726 aaKnown RBP32.23■■■□□ 2.75
ACTR1B-201ENST00000289228 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
ACTR1B-201ENST00000289228 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
ACTR1B-201ENST00000289228 UACAQ9BZF9 1416 aa32.2■■■□□ 2.75
ACTR1B-201ENST00000289228 TARBP1Q13395 1621 aaKnown RBP32.17■■■□□ 2.74
ACTR1B-201ENST00000289228 TONSLQ96HA7 1378 aa32.16■■■□□ 2.74
ACTR1B-201ENST00000289228 NAIPQ13075 1403 aa32.14■■■□□ 2.74
ACTR1B-201ENST00000289228 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
ACTR1B-201ENST00000289228 HIRIP3Q9BW71 556 aaPredicted RBP32.11■■■□□ 2.73
ACTR1B-201ENST00000289228 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
ACTR1B-201ENST00000289228 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
ACTR1B-201ENST00000289228 MAGI3Q5TCQ9 1506 aa32.07■■■□□ 2.72
ACTR1B-201ENST00000289228 PBRM1Q86U86 1689 aa32.06■■■□□ 2.72
ACTR1B-201ENST00000289228 HECW1Q76N89 1606 aa32.03■■■□□ 2.72
ACTR1B-201ENST00000289228 IQGAP2Q13576 1575 aa31.99■■■□□ 2.71
ACTR1B-201ENST00000289228 TCOF1Q13428 1488 aaKnown RBP31.99■■■□□ 2.71
ACTR1B-201ENST00000289228 CCER2I3L3R5 266 aa31.98■■■□□ 2.71
ACTR1B-201ENST00000289228 ANP32CO43423 234 aa31.98■■■□□ 2.71
ACTR1B-201ENST00000289228 ADAMTS12P58397 1594 aa31.95■■■□□ 2.7
ACTR1B-201ENST00000289228 EPRSP07814 1512 aaKnown RBP31.93■■■□□ 2.7
ACTR1B-201ENST00000289228 GCC2Q8IWJ2 1684 aa31.92■■■□□ 2.7
ACTR1B-201ENST00000289228 RRP7BPQ9NSQ0 103 aa31.91■■■□□ 2.7
ACTR1B-201ENST00000289228 MYT1Q01538 1121 aa31.91■■■□□ 2.7
ACTR1B-201ENST00000289228 KDM5BQ9UGL1 1544 aa31.88■■■□□ 2.69
ACTR1B-201ENST00000289228 CHIC2Q9UKJ5 165 aa31.88■■■□□ 2.69
ACTR1B-201ENST00000289228 AKNAQ7Z591 1439 aa31.86■■■□□ 2.69
ACTR1B-201ENST00000289228 CDK13Q14004 1512 aaKnown RBP31.85■■■□□ 2.69
ACTR1B-201ENST00000289228 WDR62O43379 1518 aa31.85■■■□□ 2.69
ACTR1B-201ENST00000289228 MIA2Q96PC5 1412 aa31.84■■■□□ 2.69
ACTR1B-201ENST00000289228 MRC2Q9UBG0 1479 aa31.84■■■□□ 2.69
ACTR1B-201ENST00000289228 TRIM52Q96A61 297 aa31.8■■■□□ 2.68
ACTR1B-201ENST00000289228 DENND4BO75064 1496 aaPredicted RBP31.79■■■□□ 2.68
ACTR1B-201ENST00000289228 KDM6BO15054 1643 aa31.78■■■□□ 2.68
ACTR1B-201ENST00000289228 ARID3CA6NKF2 412 aa31.73■■■□□ 2.67
ACTR1B-201ENST00000289228 FKBP8Q14318 412 aa31.73■■■□□ 2.67
ACTR1B-201ENST00000289228 TSHZ2Q9NRE2 1034 aa31.71■■■□□ 2.67
ACTR1B-201ENST00000289228 MPHOSPH9Q99550 1183 aa31.69■■■□□ 2.66
ACTR1B-201ENST00000289228 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
ACTR1B-201ENST00000289228 BCANQ96GW7 911 aa31.67■■■□□ 2.66
ACTR1B-201ENST00000289228 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
ACTR1B-201ENST00000289228 HSPA5P11021 654 aaKnown RBP31.65■■■□□ 2.66
ACTR1B-201ENST00000289228 KIAA0586Q9BVV6 1533 aa31.64■■■□□ 2.66
ACTR1B-201ENST00000289228 KIAA0556O60303 1618 aa31.64■■■□□ 2.66
ACTR1B-201ENST00000289228 NEFLP07196 543 aa31.63■■■□□ 2.65
ACTR1B-201ENST00000289228 DISP1Q96F81 1524 aa31.62■■■□□ 2.65
ACTR1B-201ENST00000289228 DAPK1P53355 1430 aa31.62■■■□□ 2.65
ACTR1B-201ENST00000289228 ROCK1Q13464 1354 aa31.61■■■□□ 2.65
ACTR1B-201ENST00000289228 WASHC2AQ641Q2 1341 aa31.59■■■□□ 2.65
ACTR1B-201ENST00000289228 EIF4G2P78344 907 aaKnown RBP eCLIP31.58■■■□□ 2.65
ACTR1B-201ENST00000289228 DNMT1P26358 1616 aaKnown RBP31.58■■■□□ 2.65
ACTR1B-201ENST00000289228 NUP153P49790 1475 aaKnown RBP31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms