RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
PRKCA-201ENST00000284384 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
PRKCA-201ENST00000284384 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
PRKCA-201ENST00000284384 WDR62O43379 1518 aa12.21□□□□□ -0.45
PRKCA-201ENST00000284384 NESP48681 1621 aa12.2□□□□□ -0.46
PRKCA-201ENST00000284384 FKBP8Q14318 412 aa12.2□□□□□ -0.46
PRKCA-201ENST00000284384 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
PRKCA-201ENST00000284384 PRXQ9BXM0 1461 aa12.19□□□□□ -0.46
PRKCA-201ENST00000284384 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
PRKCA-201ENST00000284384 MRC2Q9UBG0 1479 aa12.19□□□□□ -0.46
PRKCA-201ENST00000284384 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
PRKCA-201ENST00000284384 KIF27Q86VH2 1401 aa12.16□□□□□ -0.46
PRKCA-201ENST00000284384 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
PRKCA-201ENST00000284384 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
PRKCA-201ENST00000284384 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
PRKCA-201ENST00000284384 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
PRKCA-201ENST00000284384 CLIP1P30622 1438 aa12.12□□□□□ -0.47
PRKCA-201ENST00000284384 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
PRKCA-201ENST00000284384 FBLN2P98095 1184 aa12.08□□□□□ -0.48
PRKCA-201ENST00000284384 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
PRKCA-201ENST00000284384 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
PRKCA-201ENST00000284384 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
PRKCA-201ENST00000284384 CUL7Q14999 1698 aa12.05□□□□□ -0.48
PRKCA-201ENST00000284384 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
PRKCA-201ENST00000284384 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
PRKCA-201ENST00000284384 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
PRKCA-201ENST00000284384 TOPBP1Q92547 1522 aa12□□□□□ -0.49
PRKCA-201ENST00000284384 ARAP1Q96P48 1450 aa12□□□□□ -0.49
PRKCA-201ENST00000284384 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
PRKCA-201ENST00000284384 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
PRKCA-201ENST00000284384 ABCA5Q8WWZ7 1642 aa11.95□□□□□ -0.5
PRKCA-201ENST00000284384 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
PRKCA-201ENST00000284384 IGF1RP08069 1367 aa11.94□□□□□ -0.5
PRKCA-201ENST00000284384 EFCAB5A4FU69 1503 aa11.94□□□□□ -0.5
PRKCA-201ENST00000284384 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
PRKCA-201ENST00000284384 ARHGAP35Q9NRY4 1499 aa11.92□□□□□ -0.5
PRKCA-201ENST00000284384 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
PRKCA-201ENST00000284384 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
PRKCA-201ENST00000284384 CFAP43Q8NDM7 1665 aa11.91□□□□□ -0.5
PRKCA-201ENST00000284384 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
PRKCA-201ENST00000284384 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
PRKCA-201ENST00000284384 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
PRKCA-201ENST00000284384 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
PRKCA-201ENST00000284384 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCA-201ENST00000284384 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
PRKCA-201ENST00000284384 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
PRKCA-201ENST00000284384 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
PRKCA-201ENST00000284384 CENPBP07199 599 aaPredicted RBP11.83□□□□□ -0.52
PRKCA-201ENST00000284384 SAMD9Q5K651 1589 aa11.83□□□□□ -0.52
PRKCA-201ENST00000284384 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
PRKCA-201ENST00000284384 RAD54L2Q9Y4B4 1467 aa11.82□□□□□ -0.52
PRKCA-201ENST00000284384 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
PRKCA-201ENST00000284384 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
PRKCA-201ENST00000284384 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
PRKCA-201ENST00000284384 CCER1Q8TC90 406 aaPredicted RBP11.78□□□□□ -0.52
PRKCA-201ENST00000284384 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.52
PRKCA-201ENST00000284384 EIF4G3O43432 1585 aaKnown RBP11.77□□□□□ -0.53
PRKCA-201ENST00000284384 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
PRKCA-201ENST00000284384 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
PRKCA-201ENST00000284384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.72□□□□□ -0.53
PRKCA-201ENST00000284384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRKCA-201ENST00000284384 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.54
PRKCA-201ENST00000284384 CHD1O14646 1710 aa11.71□□□□□ -0.54
PRKCA-201ENST00000284384 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
PRKCA-201ENST00000284384 DIEXFQ68CQ4 756 aaKnown RBP11.68□□□□□ -0.54
PRKCA-201ENST00000284384 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
PRKCA-201ENST00000284384 IQGAP2Q13576 1575 aa11.68□□□□□ -0.54
PRKCA-201ENST00000284384 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
PRKCA-201ENST00000284384 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
PRKCA-201ENST00000284384 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
PRKCA-201ENST00000284384 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
PRKCA-201ENST00000284384 MAGI1Q96QZ7 1491 aaPredicted RBP11.66□□□□□ -0.54
PRKCA-201ENST00000284384 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
PRKCA-201ENST00000284384 FOXD4L1Q9NU39 408 aa11.66□□□□□ -0.54
PRKCA-201ENST00000284384 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
PRKCA-201ENST00000284384 CCDC18Q5T9S5 1454 aa11.65□□□□□ -0.54
PRKCA-201ENST00000284384 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.55
PRKCA-201ENST00000284384 EHBP1L1Q8N3D4 1523 aa11.65□□□□□ -0.55
PRKCA-201ENST00000284384 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
PRKCA-201ENST00000284384 NBR1Q14596 966 aa11.64□□□□□ -0.55
PRKCA-201ENST00000284384 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
PRKCA-201ENST00000284384 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
PRKCA-201ENST00000284384 SUPT6HQ7KZ85 1726 aaKnown RBP11.64□□□□□ -0.55
PRKCA-201ENST00000284384 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
PRKCA-201ENST00000284384 PDIA4P13667 645 aaKnown RBP11.63□□□□□ -0.55
PRKCA-201ENST00000284384 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
PRKCA-201ENST00000284384 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
PRKCA-201ENST00000284384 DHX57Q6P158 1386 aaKnown RBP11.6□□□□□ -0.55
PRKCA-201ENST00000284384 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
PRKCA-201ENST00000284384 HNRNPUL2Q1KMD3 747 aaKnown RBP11.58□□□□□ -0.56
PRKCA-201ENST00000284384 IGSF3O75054 1194 aa11.58□□□□□ -0.56
PRKCA-201ENST00000284384 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
PRKCA-201ENST00000284384 CDK11BP21127 795 aaKnown RBP11.57□□□□□ -0.56
PRKCA-201ENST00000284384 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
PRKCA-201ENST00000284384 KIAA0556O60303 1618 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms