RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 NEUROD1Q13562 356 aa8.9□□□□□ -0.99
TNFSF4-201ENST00000281834 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
TNFSF4-201ENST00000281834 ABCA10Q8WWZ4 1543 aa8.89□□□□□ -0.99
TNFSF4-201ENST00000281834 PRDM2Q13029 1718 aa8.88□□□□□ -0.99
TNFSF4-201ENST00000281834 LAMC3Q9Y6N6 1575 aa8.87□□□□□ -0.99
TNFSF4-201ENST00000281834 PHLDB1Q86UU1 1377 aa8.87□□□□□ -0.99
TNFSF4-201ENST00000281834 MTUS2Q5JR59 1369 aa8.86□□□□□ -0.99
TNFSF4-201ENST00000281834 FHAD1B1AJZ9 1412 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 ERCC6Q03468 1493 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 CHIC2Q9UKJ5 165 aa8.85□□□□□ -0.99
TNFSF4-201ENST00000281834 DHX57Q6P158 1386 aaKnown RBP8.84□□□□□ -0.99
TNFSF4-201ENST00000281834 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
TNFSF4-201ENST00000281834 SIN3AQ96ST3 1273 aa8.83□□□□□ -1
TNFSF4-201ENST00000281834 LRRC9Q6ZRR7 1453 aa8.82□□□□□ -1
TNFSF4-201ENST00000281834 RAB3GAP2Q9H2M9 1393 aa8.82□□□□□ -1
TNFSF4-201ENST00000281834 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
TNFSF4-201ENST00000281834 MIER1Q8N108 512 aa8.81□□□□□ -1
TNFSF4-201ENST00000281834 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
TNFSF4-201ENST00000281834 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
TNFSF4-201ENST00000281834 TIAM1Q13009 1591 aa8.8□□□□□ -1
TNFSF4-201ENST00000281834 RRP7BPQ9NSQ0 103 aa8.79□□□□□ -1
TNFSF4-201ENST00000281834 FMN1Q68DA7 1419 aa8.78□□□□□ -1
TNFSF4-201ENST00000281834 MRC2Q9UBG0 1479 aa8.78□□□□□ -1
TNFSF4-201ENST00000281834 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
TNFSF4-201ENST00000281834 TRIM52Q96A61 297 aa8.77□□□□□ -1.01
TNFSF4-201ENST00000281834 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
TNFSF4-201ENST00000281834 CENPBP07199 599 aaPredicted RBP8.75□□□□□ -1.01
TNFSF4-201ENST00000281834 CUL7Q14999 1698 aa8.75□□□□□ -1.01
TNFSF4-201ENST00000281834 FYCO1Q9BQS8 1478 aa8.74□□□□□ -1.01
TNFSF4-201ENST00000281834 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
TNFSF4-201ENST00000281834 GRIN2BQ13224 1484 aa8.73□□□□□ -1.01
TNFSF4-201ENST00000281834 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 SNAPC4Q5SXM2 1469 aa8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 EFCAB5A4FU69 1503 aa8.72□□□□□ -1.01
TNFSF4-201ENST00000281834 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.01
TNFSF4-201ENST00000281834 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
TNFSF4-201ENST00000281834 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
TNFSF4-201ENST00000281834 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
TNFSF4-201ENST00000281834 FOXD1Q16676 465 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 ZNF644Q9H582 1327 aaPredicted RBP8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 NCOA2Q15596 1464 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 CDK13Q14004 1512 aaKnown RBP8.7□□□□□ -1.02
TNFSF4-201ENST00000281834 IFT140Q96RY7 1462 aa8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 DDX10Q13206 875 aaKnown RBP8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 WDR97A6NE52 1622 aa8.69□□□□□ -1.02
TNFSF4-201ENST00000281834 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 PTPRKQ15262 1439 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 MAP3K1Q13233 1512 aa8.68□□□□□ -1.02
TNFSF4-201ENST00000281834 IQGAP2Q13576 1575 aa8.67□□□□□ -1.02
TNFSF4-201ENST00000281834 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
TNFSF4-201ENST00000281834 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
TNFSF4-201ENST00000281834 TONSLQ96HA7 1378 aa8.66□□□□□ -1.02
TNFSF4-201ENST00000281834 CFDP1Q9UEE9 299 aaPredicted RBP8.65□□□□□ -1.03
TNFSF4-201ENST00000281834 ADAMTS12P58397 1594 aa8.65□□□□□ -1.03
TNFSF4-201ENST00000281834 CNGB1Q14028 1251 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 CFAP43Q8NDM7 1665 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 EPRSP07814 1512 aaKnown RBP8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 MAPKBP1O60336 1514 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 MAGI3Q5TCQ9 1506 aa8.64□□□□□ -1.03
TNFSF4-201ENST00000281834 KCNH8Q96L42 1107 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 GRIN2AQ12879 1464 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 CCDC18Q5T9S5 1454 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 SAMD9Q5K651 1589 aa8.63□□□□□ -1.03
TNFSF4-201ENST00000281834 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 WDR62O43379 1518 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 EIF4G3O43432 1585 aaKnown RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 ZNF326Q5BKZ1 582 aaKnown RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 PRG4Q92954 1404 aaPredicted RBP8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 KIAA0586Q9BVV6 1533 aa8.62□□□□□ -1.03
TNFSF4-201ENST00000281834 PLEKHD1A6NEE1 506 aa8.61□□□□□ -1.03
TNFSF4-201ENST00000281834 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
TNFSF4-201ENST00000281834 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 NAIPQ13075 1403 aa8.6□□□□□ -1.03
TNFSF4-201ENST00000281834 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 EHBP1L1Q8N3D4 1523 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 DISP1Q96F81 1524 aa8.59□□□□□ -1.03
TNFSF4-201ENST00000281834 MPHOSPH9Q99550 1183 aa8.59□□□□□ -1.04
TNFSF4-201ENST00000281834 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 CARMIL2Q6F5E8 1435 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
TNFSF4-201ENST00000281834 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
TNFSF4-201ENST00000281834 PTPN23Q9H3S7 1636 aa8.57□□□□□ -1.04
TNFSF4-201ENST00000281834 HNRNPMP52272 730 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 UACAQ9BZF9 1416 aa8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNFSF4-201ENST00000281834 MAGI1Q96QZ7 1491 aaPredicted RBP8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 KIAA0556O60303 1618 aa8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 L3MBTL2Q969R5 705 aa8.55□□□□□ -1.04
TNFSF4-201ENST00000281834 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms