RNA–Protein interactions for RNA: ENST00000279451.8

CNKSR2-201, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 4,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-201ENST00000279451 ANP32CO43423 234 aa16.56■□□□□ 0.24
CNKSR2-201ENST00000279451 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
CNKSR2-201ENST00000279451 VPS8Q8N3P4 1428 aa16.52■□□□□ 0.23
CNKSR2-201ENST00000279451 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
CNKSR2-201ENST00000279451 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
CNKSR2-201ENST00000279451 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
CNKSR2-201ENST00000279451 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
CNKSR2-201ENST00000279451 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
CNKSR2-201ENST00000279451 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
CNKSR2-201ENST00000279451 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
CNKSR2-201ENST00000279451 JPH4Q96JJ6 628 aa16.44■□□□□ 0.22
CNKSR2-201ENST00000279451 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
CNKSR2-201ENST00000279451 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
CNKSR2-201ENST00000279451 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
CNKSR2-201ENST00000279451 NESP48681 1621 aa16.42■□□□□ 0.22
CNKSR2-201ENST00000279451 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
CNKSR2-201ENST00000279451 IGF1RP08069 1367 aa16.41■□□□□ 0.22
CNKSR2-201ENST00000279451 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
CNKSR2-201ENST00000279451 HIRIP3Q9BW71 556 aaPredicted RBP16.4■□□□□ 0.22
CNKSR2-201ENST00000279451 CFTRP13569 1480 aa16.39■□□□□ 0.21
CNKSR2-201ENST00000279451 FMN1Q68DA7 1419 aa16.38■□□□□ 0.21
CNKSR2-201ENST00000279451 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
CNKSR2-201ENST00000279451 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
CNKSR2-201ENST00000279451 GAPVD1Q14C86 1478 aa16.34■□□□□ 0.21
CNKSR2-201ENST00000279451 ERICH6Q7L0X2 663 aa16.34■□□□□ 0.21
CNKSR2-201ENST00000279451 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.2
CNKSR2-201ENST00000279451 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
CNKSR2-201ENST00000279451 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNKSR2-201ENST00000279451 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
CNKSR2-201ENST00000279451 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
CNKSR2-201ENST00000279451 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
CNKSR2-201ENST00000279451 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
CNKSR2-201ENST00000279451 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
CNKSR2-201ENST00000279451 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
CNKSR2-201ENST00000279451 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
CNKSR2-201ENST00000279451 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CNKSR2-201ENST00000279451 PTPRGP23470 1445 aa16.19■□□□□ 0.18
CNKSR2-201ENST00000279451 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
CNKSR2-201ENST00000279451 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
CNKSR2-201ENST00000279451 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 MLECQ14165 292 aa16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 FAM9BQ8IZU0 186 aa16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 NEFMP07197 916 aa16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 HNRNPMP52272 730 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
CNKSR2-201ENST00000279451 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
CNKSR2-201ENST00000279451 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
CNKSR2-201ENST00000279451 CUX1P39880 1505 aa16.15■□□□□ 0.18
CNKSR2-201ENST00000279451 FOXD1Q16676 465 aa16.15■□□□□ 0.18
CNKSR2-201ENST00000279451 GGT6Q6P531 493 aa16.15■□□□□ 0.18
CNKSR2-201ENST00000279451 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
CNKSR2-201ENST00000279451 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
CNKSR2-201ENST00000279451 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
CNKSR2-201ENST00000279451 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
CNKSR2-201ENST00000279451 MIER1Q8N108 512 aa16.13■□□□□ 0.17
CNKSR2-201ENST00000279451 CARD11Q9BXL7 1154 aa16.12■□□□□ 0.17
CNKSR2-201ENST00000279451 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
CNKSR2-201ENST00000279451 PKD2Q13563 968 aa16.12■□□□□ 0.17
CNKSR2-201ENST00000279451 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
CNKSR2-201ENST00000279451 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
CNKSR2-201ENST00000279451 TMC1Q8TDI8 760 aa16.11■□□□□ 0.17
CNKSR2-201ENST00000279451 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
CNKSR2-201ENST00000279451 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
CNKSR2-201ENST00000279451 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
CNKSR2-201ENST00000279451 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
CNKSR2-201ENST00000279451 TOP2BQ02880 1626 aa16.07■□□□□ 0.16
CNKSR2-201ENST00000279451 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
CNKSR2-201ENST00000279451 ANKRD30AQ9BXX3 1397 aa16.06■□□□□ 0.16
CNKSR2-201ENST00000279451 NUP155O75694 1391 aa16.06■□□□□ 0.16
CNKSR2-201ENST00000279451 KANK1Q14678 1352 aa16.05■□□□□ 0.16
CNKSR2-201ENST00000279451 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
CNKSR2-201ENST00000279451 KIF3BO15066 747 aa16.04■□□□□ 0.16
CNKSR2-201ENST00000279451 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
CNKSR2-201ENST00000279451 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
CNKSR2-201ENST00000279451 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
CNKSR2-201ENST00000279451 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
CNKSR2-201ENST00000279451 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.15
CNKSR2-201ENST00000279451 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
CNKSR2-201ENST00000279451 KIF21BO75037 1637 aa16■□□□□ 0.15
CNKSR2-201ENST00000279451 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
CNKSR2-201ENST00000279451 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
CNKSR2-201ENST00000279451 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
CNKSR2-201ENST00000279451 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
CNKSR2-201ENST00000279451 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
CNKSR2-201ENST00000279451 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
CNKSR2-201ENST00000279451 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
CNKSR2-201ENST00000279451 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
CNKSR2-201ENST00000279451 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
CNKSR2-201ENST00000279451 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
CNKSR2-201ENST00000279451 POGKQ9P215 609 aa15.95■□□□□ 0.14
CNKSR2-201ENST00000279451 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
CNKSR2-201ENST00000279451 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
CNKSR2-201ENST00000279451 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
CNKSR2-201ENST00000279451 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
CNKSR2-201ENST00000279451 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
CNKSR2-201ENST00000279451 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
CNKSR2-201ENST00000279451 PHLDB1Q86UU1 1377 aa15.9■□□□□ 0.14
CNKSR2-201ENST00000279451 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
CNKSR2-201ENST00000279451 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
CNKSR2-201ENST00000279451 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms