RNA–Protein interactions for RNA: ENST00000279451.8

CNKSR2-201, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

TSL 1 (best) BASIC

Gene CNKSR2, Length 4,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-201ENST00000279451 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
CNKSR2-201ENST00000279451 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
CNKSR2-201ENST00000279451 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
CNKSR2-201ENST00000279451 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
CNKSR2-201ENST00000279451 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
CNKSR2-201ENST00000279451 ABCC9O60706 1549 aa19.25■□□□□ 0.67
CNKSR2-201ENST00000279451 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
CNKSR2-201ENST00000279451 TRIM41Q8WV44 630 aa18.94■□□□□ 0.62
CNKSR2-201ENST00000279451 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
CNKSR2-201ENST00000279451 APLP2Q06481 763 aa18.71■□□□□ 0.59
CNKSR2-201ENST00000279451 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
CNKSR2-201ENST00000279451 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
CNKSR2-201ENST00000279451 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
CNKSR2-201ENST00000279451 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
CNKSR2-201ENST00000279451 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
CNKSR2-201ENST00000279451 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
CNKSR2-201ENST00000279451 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
CNKSR2-201ENST00000279451 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
CNKSR2-201ENST00000279451 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
CNKSR2-201ENST00000279451 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
CNKSR2-201ENST00000279451 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
CNKSR2-201ENST00000279451 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
CNKSR2-201ENST00000279451 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
CNKSR2-201ENST00000279451 NACADO15069 1562 aa17.96■□□□□ 0.47
CNKSR2-201ENST00000279451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
CNKSR2-201ENST00000279451 HNRNPUL2Q1KMD3 747 aaKnown RBP17.9■□□□□ 0.46
CNKSR2-201ENST00000279451 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
CNKSR2-201ENST00000279451 ITGAEP38570 1179 aa17.8■□□□□ 0.44
CNKSR2-201ENST00000279451 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
CNKSR2-201ENST00000279451 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
CNKSR2-201ENST00000279451 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
CNKSR2-201ENST00000279451 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
CNKSR2-201ENST00000279451 FBLN2P98095 1184 aa17.71■□□□□ 0.43
CNKSR2-201ENST00000279451 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
CNKSR2-201ENST00000279451 MYT1LQ9UL68 1186 aa17.59■□□□□ 0.41
CNKSR2-201ENST00000279451 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
CNKSR2-201ENST00000279451 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
CNKSR2-201ENST00000279451 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
CNKSR2-201ENST00000279451 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
CNKSR2-201ENST00000279451 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
CNKSR2-201ENST00000279451 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
CNKSR2-201ENST00000279451 HRCP23327 699 aa17.39■□□□□ 0.37
CNKSR2-201ENST00000279451 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
CNKSR2-201ENST00000279451 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
CNKSR2-201ENST00000279451 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
CNKSR2-201ENST00000279451 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
CNKSR2-201ENST00000279451 POLR3GLQ9BT43 218 aa17.17■□□□□ 0.34
CNKSR2-201ENST00000279451 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
CNKSR2-201ENST00000279451 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
CNKSR2-201ENST00000279451 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
CNKSR2-201ENST00000279451 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
CNKSR2-201ENST00000279451 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
CNKSR2-201ENST00000279451 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
CNKSR2-201ENST00000279451 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
CNKSR2-201ENST00000279451 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CNKSR2-201ENST00000279451 EEA1Q15075 1411 aa17.09■□□□□ 0.33
CNKSR2-201ENST00000279451 WIZO95785 1651 aa17.07■□□□□ 0.32
CNKSR2-201ENST00000279451 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
CNKSR2-201ENST00000279451 CLIP1P30622 1438 aa17.06■□□□□ 0.32
CNKSR2-201ENST00000279451 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
CNKSR2-201ENST00000279451 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
CNKSR2-201ENST00000279451 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.31
CNKSR2-201ENST00000279451 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
CNKSR2-201ENST00000279451 SOGA1O94964 1423 aa16.98■□□□□ 0.31
CNKSR2-201ENST00000279451 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNKSR2-201ENST00000279451 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
CNKSR2-201ENST00000279451 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
CNKSR2-201ENST00000279451 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
CNKSR2-201ENST00000279451 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
CNKSR2-201ENST00000279451 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
CNKSR2-201ENST00000279451 CUX2O14529 1486 aa16.92■□□□□ 0.3
CNKSR2-201ENST00000279451 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
CNKSR2-201ENST00000279451 CADPSQ9ULU8 1353 aa16.91■□□□□ 0.3
CNKSR2-201ENST00000279451 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
CNKSR2-201ENST00000279451 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
CNKSR2-201ENST00000279451 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
CNKSR2-201ENST00000279451 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
CNKSR2-201ENST00000279451 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
CNKSR2-201ENST00000279451 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
CNKSR2-201ENST00000279451 SLC4A1APQ9BWU0 796 aaKnown RBP16.83■□□□□ 0.29
CNKSR2-201ENST00000279451 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
CNKSR2-201ENST00000279451 NEFLP07196 543 aa16.81■□□□□ 0.28
CNKSR2-201ENST00000279451 KCNH8Q96L42 1107 aa16.8■□□□□ 0.28
CNKSR2-201ENST00000279451 PLEKHD1A6NEE1 506 aa16.77■□□□□ 0.27
CNKSR2-201ENST00000279451 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
CNKSR2-201ENST00000279451 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
CNKSR2-201ENST00000279451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
CNKSR2-201ENST00000279451 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
CNKSR2-201ENST00000279451 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
CNKSR2-201ENST00000279451 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
CNKSR2-201ENST00000279451 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
CNKSR2-201ENST00000279451 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
CNKSR2-201ENST00000279451 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
CNKSR2-201ENST00000279451 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
CNKSR2-201ENST00000279451 CFDP1Q9UEE9 299 aaPredicted RBP16.63■□□□□ 0.25
CNKSR2-201ENST00000279451 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
CNKSR2-201ENST00000279451 BCANQ96GW7 911 aa16.62■□□□□ 0.25
CNKSR2-201ENST00000279451 PLPPR3Q6T4P5 718 aa16.59■□□□□ 0.25
CNKSR2-201ENST00000279451 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.25
CNKSR2-201ENST00000279451 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms