RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
CHEK1-201ENST00000278916 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
CHEK1-201ENST00000278916 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
CHEK1-201ENST00000278916 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
CHEK1-201ENST00000278916 KIAA0586Q9BVV6 1533 aa19.53■□□□□ 0.72
CHEK1-201ENST00000278916 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
CHEK1-201ENST00000278916 SHROOM2Q13796 1616 aa19.51■□□□□ 0.71
CHEK1-201ENST00000278916 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
CHEK1-201ENST00000278916 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
CHEK1-201ENST00000278916 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
CHEK1-201ENST00000278916 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
CHEK1-201ENST00000278916 KIF21BO75037 1637 aa19.46■□□□□ 0.71
CHEK1-201ENST00000278916 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
CHEK1-201ENST00000278916 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
CHEK1-201ENST00000278916 TTBK1Q5TCY1 1321 aaPredicted RBP19.42■□□□□ 0.7
CHEK1-201ENST00000278916 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.7
CHEK1-201ENST00000278916 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
CHEK1-201ENST00000278916 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
CHEK1-201ENST00000278916 UGGT2Q9NYU1 1516 aa19.34■□□□□ 0.69
CHEK1-201ENST00000278916 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
CHEK1-201ENST00000278916 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
CHEK1-201ENST00000278916 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
CHEK1-201ENST00000278916 LOC105371045A0A1W2PR82 267 aa19.27■□□□□ 0.68
CHEK1-201ENST00000278916 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
CHEK1-201ENST00000278916 PTPRGP23470 1445 aa19.25■□□□□ 0.67
CHEK1-201ENST00000278916 SAMD9Q5K651 1589 aa19.21■□□□□ 0.67
CHEK1-201ENST00000278916 FHOD3Q2V2M9 1422 aa19.2■□□□□ 0.66
CHEK1-201ENST00000278916 ADCY10Q96PN6 1610 aa19.17■□□□□ 0.66
CHEK1-201ENST00000278916 PLB1Q6P1J6 1458 aa19.15■□□□□ 0.66
CHEK1-201ENST00000278916 ARHGAP35Q9NRY4 1499 aa19.13■□□□□ 0.65
CHEK1-201ENST00000278916 EFCAB5A4FU69 1503 aa19.12■□□□□ 0.65
CHEK1-201ENST00000278916 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
CHEK1-201ENST00000278916 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
CHEK1-201ENST00000278916 ABCC2Q92887 1545 aa19.08■□□□□ 0.64
CHEK1-201ENST00000278916 CLIP1P30622 1438 aa19.07■□□□□ 0.64
CHEK1-201ENST00000278916 ABCA8O94911 1581 aa19.06■□□□□ 0.64
CHEK1-201ENST00000278916 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHEK1-201ENST00000278916 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
CHEK1-201ENST00000278916 UHRF1BP1LA0JNW5 1464 aa19.03■□□□□ 0.64
CHEK1-201ENST00000278916 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
CHEK1-201ENST00000278916 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
CHEK1-201ENST00000278916 ZCCHC11Q5TAX3 1644 aaKnown RBP19■□□□□ 0.63
CHEK1-201ENST00000278916 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
CHEK1-201ENST00000278916 KDM5BQ9UGL1 1544 aa18.98■□□□□ 0.63
CHEK1-201ENST00000278916 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
CHEK1-201ENST00000278916 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
CHEK1-201ENST00000278916 MAPKBP1O60336 1514 aa18.94■□□□□ 0.62
CHEK1-201ENST00000278916 ASXL2Q76L83 1435 aa18.94■□□□□ 0.62
CHEK1-201ENST00000278916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
CHEK1-201ENST00000278916 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
CHEK1-201ENST00000278916 ATP10BO94823 1461 aa18.93■□□□□ 0.62
CHEK1-201ENST00000278916 PCF11O94913 1555 aaKnown RBP18.92■□□□□ 0.62
CHEK1-201ENST00000278916 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
CHEK1-201ENST00000278916 FAM69CQ0P6D2 419 aa18.88■□□□□ 0.61
CHEK1-201ENST00000278916 KIF13AQ9H1H9 1805 aa18.87■□□□□ 0.61
CHEK1-201ENST00000278916 HECW1Q76N89 1606 aa18.87■□□□□ 0.61
CHEK1-201ENST00000278916 LRRIQ1Q96JM4 1722 aa18.87■□□□□ 0.61
CHEK1-201ENST00000278916 KCNH8Q96L42 1107 aa18.86■□□□□ 0.61
CHEK1-201ENST00000278916 DIP2BQ9P265 1576 aa18.86■□□□□ 0.61
CHEK1-201ENST00000278916 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
CHEK1-201ENST00000278916 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
CHEK1-201ENST00000278916 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
CHEK1-201ENST00000278916 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
CHEK1-201ENST00000278916 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
CHEK1-201ENST00000278916 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
CHEK1-201ENST00000278916 VPS8Q8N3P4 1428 aa18.76■□□□□ 0.59
CHEK1-201ENST00000278916 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
CHEK1-201ENST00000278916 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
CHEK1-201ENST00000278916 MAGI3Q5TCQ9 1506 aa18.72■□□□□ 0.59
CHEK1-201ENST00000278916 GLI2P10070 1586 aa18.72■□□□□ 0.59
CHEK1-201ENST00000278916 MAP3K4Q9Y6R4 1608 aa18.7■□□□□ 0.58
CHEK1-201ENST00000278916 KIF14Q15058 1648 aa18.69■□□□□ 0.58
CHEK1-201ENST00000278916 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
CHEK1-201ENST00000278916 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
CHEK1-201ENST00000278916 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
CHEK1-201ENST00000278916 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
CHEK1-201ENST00000278916 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
CHEK1-201ENST00000278916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.66■□□□□ 0.58
CHEK1-201ENST00000278916 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
CHEK1-201ENST00000278916 ABCA9Q8IUA7 1624 aa18.64■□□□□ 0.58
CHEK1-201ENST00000278916 MTUS2Q5JR59 1369 aa18.61■□□□□ 0.57
CHEK1-201ENST00000278916 TIAM1Q13009 1591 aa18.61■□□□□ 0.57
CHEK1-201ENST00000278916 KANK4Q5T7N3 995 aaPredicted RBP18.59■□□□□ 0.57
CHEK1-201ENST00000278916 EHBP1L1Q8N3D4 1523 aa18.55■□□□□ 0.56
CHEK1-201ENST00000278916 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
CHEK1-201ENST00000278916 APLP2Q06481 763 aa18.54■□□□□ 0.56
CHEK1-201ENST00000278916 LRRC9Q6ZRR7 1453 aa18.53■□□□□ 0.56
CHEK1-201ENST00000278916 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
CHEK1-201ENST00000278916 KDM6BO15054 1643 aa18.52■□□□□ 0.56
CHEK1-201ENST00000278916 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.56
CHEK1-201ENST00000278916 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.55
CHEK1-201ENST00000278916 PLCH2O75038 1416 aa18.5■□□□□ 0.55
CHEK1-201ENST00000278916 FANCAO15360 1455 aa18.5■□□□□ 0.55
CHEK1-201ENST00000278916 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
CHEK1-201ENST00000278916 ARHGAP5Q13017 1502 aa18.49■□□□□ 0.55
CHEK1-201ENST00000278916 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
CHEK1-201ENST00000278916 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
CHEK1-201ENST00000278916 NCOA2Q15596 1464 aa18.48■□□□□ 0.55
CHEK1-201ENST00000278916 SUPT6HQ7KZ85 1726 aaKnown RBP18.47■□□□□ 0.55
CHEK1-201ENST00000278916 PREX2Q70Z35 1606 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms