RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 SETD5Q9C0A6 1442 aa26.51■■□□□ 1.83
SSC4D-201ENST00000275560 PPP1R15AO75807 674 aaPredicted RBP26.51■■□□□ 1.83
SSC4D-201ENST00000275560 RBM19Q9Y4C8 960 aaKnown RBP26.51■■□□□ 1.83
SSC4D-201ENST00000275560 BCL11AQ9H165 835 aa26.5■■□□□ 1.83
SSC4D-201ENST00000275560 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
SSC4D-201ENST00000275560 NEFLP07196 543 aa26.46■■□□□ 1.83
SSC4D-201ENST00000275560 ATP1B4Q9UN42 357 aaPredicted RBP26.43■■□□□ 1.82
SSC4D-201ENST00000275560 P3H3Q8IVL6 736 aa26.42■■□□□ 1.82
SSC4D-201ENST00000275560 TIAM1Q13009 1591 aa26.42■■□□□ 1.82
SSC4D-201ENST00000275560 ANP32CO43423 234 aa26.36■■□□□ 1.81
SSC4D-201ENST00000275560 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
SSC4D-201ENST00000275560 IRX6P78412 446 aaPredicted RBP26.3■■□□□ 1.8
SSC4D-201ENST00000275560 IGF1RP08069 1367 aa26.3■■□□□ 1.8
SSC4D-201ENST00000275560 MSH5O43196 834 aa26.28■■□□□ 1.8
SSC4D-201ENST00000275560 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
SSC4D-201ENST00000275560 CARMIL1Q5VZK9 1371 aa26.21■■□□□ 1.79
SSC4D-201ENST00000275560 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
SSC4D-201ENST00000275560 CFTRP13569 1480 aa26.18■■□□□ 1.78
SSC4D-201ENST00000275560 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
SSC4D-201ENST00000275560 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
SSC4D-201ENST00000275560 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
SSC4D-201ENST00000275560 TONSLQ96HA7 1378 aa26.14■■□□□ 1.78
SSC4D-201ENST00000275560 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
SSC4D-201ENST00000275560 FHOD3Q2V2M9 1422 aa26.12■■□□□ 1.77
SSC4D-201ENST00000275560 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
SSC4D-201ENST00000275560 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
SSC4D-201ENST00000275560 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
SSC4D-201ENST00000275560 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
SSC4D-201ENST00000275560 CCDC18Q5T9S5 1454 aa25.99■■□□□ 1.75
SSC4D-201ENST00000275560 CDK11AQ9UQ88 783 aaPredicted RBP25.99■■□□□ 1.75
SSC4D-201ENST00000275560 PTPRKQ15262 1439 aa25.99■■□□□ 1.75
SSC4D-201ENST00000275560 CCDC184Q52MB2 194 aa25.96■■□□□ 1.75
SSC4D-201ENST00000275560 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
SSC4D-201ENST00000275560 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.742e-9■■■■■ 29.7
SSC4D-201ENST00000275560 ERICH6Q7L0X2 663 aa25.92■■□□□ 1.74
SSC4D-201ENST00000275560 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
SSC4D-201ENST00000275560 FANCIQ9NVI1 1328 aa25.91■■□□□ 1.74
SSC4D-201ENST00000275560 HSPA5P11021 654 aaKnown RBP25.89■■□□□ 1.73
SSC4D-201ENST00000275560 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
SSC4D-201ENST00000275560 UACAQ9BZF9 1416 aa25.88■■□□□ 1.73
SSC4D-201ENST00000275560 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
SSC4D-201ENST00000275560 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SSC4D-201ENST00000275560 PTPN23Q9H3S7 1636 aa25.85■■□□□ 1.73
SSC4D-201ENST00000275560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.85■■□□□ 1.73
SSC4D-201ENST00000275560 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
SSC4D-201ENST00000275560 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
SSC4D-201ENST00000275560 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
SSC4D-201ENST00000275560 PRDM2Q13029 1718 aa25.83■■□□□ 1.73
SSC4D-201ENST00000275560 RAD54L2Q9Y4B4 1467 aa25.83■■□□□ 1.72
SSC4D-201ENST00000275560 FAM9BQ8IZU0 186 aa25.83■■□□□ 1.72
SSC4D-201ENST00000275560 NAIPQ13075 1403 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 RRP7BPQ9NSQ0 103 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 CHIC2Q9UKJ5 165 aa25.82■■□□□ 1.72
SSC4D-201ENST00000275560 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
SSC4D-201ENST00000275560 PPP4R2Q9NY27 417 aa25.77■■□□□ 1.72
SSC4D-201ENST00000275560 C11orf95C9JLR9 678 aaPredicted RBP25.77■■□□□ 1.72
SSC4D-201ENST00000275560 FOXD1Q16676 465 aa25.73■■□□□ 1.71
SSC4D-201ENST00000275560 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
SSC4D-201ENST00000275560 CNGB1Q14028 1251 aaPredicted RBP25.71■■□□□ 1.71
SSC4D-201ENST00000275560 EFCAB5A4FU69 1503 aa25.7■■□□□ 1.71
SSC4D-201ENST00000275560 NCOA2Q15596 1464 aa25.7■■□□□ 1.7
SSC4D-201ENST00000275560 EIF4G2P78344 907 aaKnown RBP eCLIP25.7■■□□□ 1.7
SSC4D-201ENST00000275560 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
SSC4D-201ENST00000275560 LRRIQ1Q96JM4 1722 aa25.68■■□□□ 1.7
SSC4D-201ENST00000275560 FMN1Q68DA7 1419 aa25.67■■□□□ 1.7
SSC4D-201ENST00000275560 SENP3-EIF4A1A0A087X0R7 540 aa25.67■■□□□ 1.7
SSC4D-201ENST00000275560 MYOM3Q5VTT5 1437 aa25.66■■□□□ 1.7
SSC4D-201ENST00000275560 PRKRIP1Q9H875 184 aaPredicted RBP25.66■■□□□ 1.7
SSC4D-201ENST00000275560 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
SSC4D-201ENST00000275560 CNTLNQ9NXG0 1405 aa25.66■■□□□ 1.7
SSC4D-201ENST00000275560 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
SSC4D-201ENST00000275560 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
SSC4D-201ENST00000275560 CTTNBP2Q8WZ74 1663 aa25.63■■□□□ 1.69
SSC4D-201ENST00000275560 KDM6BO15054 1643 aa25.61■■□□□ 1.69
SSC4D-201ENST00000275560 DEKP35659 375 aaKnown RBP25.6■■□□□ 1.69
SSC4D-201ENST00000275560 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
SSC4D-201ENST00000275560 NBR1Q14596 966 aa25.59■■□□□ 1.69
SSC4D-201ENST00000275560 ERICH6BQ5W0A0 696 aa25.59■■□□□ 1.69
SSC4D-201ENST00000275560 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.68
SSC4D-201ENST00000275560 CCDC7Q96M83 1385 aa25.57■■□□□ 1.68
SSC4D-201ENST00000275560 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
SSC4D-201ENST00000275560 ARID3CA6NKF2 412 aa25.56■■□□□ 1.68
SSC4D-201ENST00000275560 ZBED9Q6R2W3 1325 aa25.56■■□□□ 1.68
SSC4D-201ENST00000275560 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
SSC4D-201ENST00000275560 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
SSC4D-201ENST00000275560 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
SSC4D-201ENST00000275560 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
SSC4D-201ENST00000275560 NCOA1Q15788 1441 aa25.52■■□□□ 1.68
SSC4D-201ENST00000275560 AKNAQ7Z591 1439 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 GRIN2BQ13224 1484 aa25.51■■□□□ 1.67
SSC4D-201ENST00000275560 NOP58Q9Y2X3 529 aaKnown RBP25.49■■□□□ 1.67
SSC4D-201ENST00000275560 CUL7Q14999 1698 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 DNMBPQ6XZF7 1577 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 CC2D2AQ9P2K1 1620 aa25.49■■□□□ 1.67
SSC4D-201ENST00000275560 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
SSC4D-201ENST00000275560 KIF7Q2M1P5 1343 aa25.48■■□□□ 1.67
SSC4D-201ENST00000275560 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
SSC4D-201ENST00000275560 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
SSC4D-201ENST00000275560 NESP48681 1621 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms