RNA–Protein interactions for RNA: ENST00000273077.8

PNKD-203, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PNKD, Length 3,021 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-203ENST00000273077 RRBP1Q9P2E9 1410 aaKnown RBP20.43■□□□□ 0.86
PNKD-203ENST00000273077 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
PNKD-203ENST00000273077 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
PNKD-203ENST00000273077 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
PNKD-203ENST00000273077 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
PNKD-203ENST00000273077 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
PNKD-203ENST00000273077 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
PNKD-203ENST00000273077 TIAM1Q13009 1591 aa20.34■□□□□ 0.85
PNKD-203ENST00000273077 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.85
PNKD-203ENST00000273077 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
PNKD-203ENST00000273077 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
PNKD-203ENST00000273077 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
PNKD-203ENST00000273077 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
PNKD-203ENST00000273077 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
PNKD-203ENST00000273077 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
PNKD-203ENST00000273077 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
PNKD-203ENST00000273077 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
PNKD-203ENST00000273077 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
PNKD-203ENST00000273077 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
PNKD-203ENST00000273077 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
PNKD-203ENST00000273077 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
PNKD-203ENST00000273077 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
PNKD-203ENST00000273077 KCNH8Q96L42 1107 aa20.14■□□□□ 0.82
PNKD-203ENST00000273077 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
PNKD-203ENST00000273077 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
PNKD-203ENST00000273077 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
PNKD-203ENST00000273077 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.8
PNKD-203ENST00000273077 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
PNKD-203ENST00000273077 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
PNKD-203ENST00000273077 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
PNKD-203ENST00000273077 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
PNKD-203ENST00000273077 CUL7Q14999 1698 aa20.04■□□□□ 0.8
PNKD-203ENST00000273077 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
PNKD-203ENST00000273077 LAMC3Q9Y6N6 1575 aa20.03■□□□□ 0.8
PNKD-203ENST00000273077 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
PNKD-203ENST00000273077 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
PNKD-203ENST00000273077 EFCAB5A4FU69 1503 aa20.01■□□□□ 0.79
PNKD-203ENST00000273077 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
PNKD-203ENST00000273077 FMN1Q68DA7 1419 aa20.01■□□□□ 0.79
PNKD-203ENST00000273077 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.791e-6■■■■■ 34.9
PNKD-203ENST00000273077 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
PNKD-203ENST00000273077 PTPRKQ15262 1439 aa19.99■□□□□ 0.79
PNKD-203ENST00000273077 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
PNKD-203ENST00000273077 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
PNKD-203ENST00000273077 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
PNKD-203ENST00000273077 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
PNKD-203ENST00000273077 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
PNKD-203ENST00000273077 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
PNKD-203ENST00000273077 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
PNKD-203ENST00000273077 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
PNKD-203ENST00000273077 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
PNKD-203ENST00000273077 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
PNKD-203ENST00000273077 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
PNKD-203ENST00000273077 TONSLQ96HA7 1378 aa19.85■□□□□ 0.77
PNKD-203ENST00000273077 TARBP1Q13395 1621 aaKnown RBP19.85■□□□□ 0.77
PNKD-203ENST00000273077 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
PNKD-203ENST00000273077 CDK13Q14004 1512 aaKnown RBP19.84■□□□□ 0.77
PNKD-203ENST00000273077 FOXD1Q16676 465 aa19.83■□□□□ 0.77
PNKD-203ENST00000273077 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
PNKD-203ENST00000273077 NAIPQ13075 1403 aa19.8■□□□□ 0.76
PNKD-203ENST00000273077 SUPT16HQ9Y5B9 1047 aaKnown RBP19.8■□□□□ 0.76
PNKD-203ENST00000273077 PTPN23Q9H3S7 1636 aa19.79■□□□□ 0.76
PNKD-203ENST00000273077 BCANQ96GW7 911 aa19.78■□□□□ 0.76
PNKD-203ENST00000273077 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
PNKD-203ENST00000273077 FBLN2P98095 1184 aa19.78■□□□□ 0.76
PNKD-203ENST00000273077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
PNKD-203ENST00000273077 ANP32EQ9BTT0 268 aa19.77■□□□□ 0.76
PNKD-203ENST00000273077 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
PNKD-203ENST00000273077 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
PNKD-203ENST00000273077 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
PNKD-203ENST00000273077 EHBP1L1Q8N3D4 1523 aa19.74■□□□□ 0.75
PNKD-203ENST00000273077 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
PNKD-203ENST00000273077 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
PNKD-203ENST00000273077 EPRSP07814 1512 aaKnown RBP19.72■□□□□ 0.75
PNKD-203ENST00000273077 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
PNKD-203ENST00000273077 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
PNKD-203ENST00000273077 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
PNKD-203ENST00000273077 KDM6BO15054 1643 aa19.7■□□□□ 0.74
PNKD-203ENST00000273077 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
PNKD-203ENST00000273077 ANP32CO43423 234 aa19.68■□□□□ 0.74
PNKD-203ENST00000273077 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
PNKD-203ENST00000273077 HECW1Q76N89 1606 aa19.65■□□□□ 0.74
PNKD-203ENST00000273077 ZNF777Q9ULD5 760 aaPredicted RBP19.65■□□□□ 0.74
PNKD-203ENST00000273077 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
PNKD-203ENST00000273077 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
PNKD-203ENST00000273077 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
PNKD-203ENST00000273077 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
PNKD-203ENST00000273077 WDR62O43379 1518 aa19.61■□□□□ 0.73
PNKD-203ENST00000273077 CNGB1Q14028 1251 aaPredicted RBP19.6■□□□□ 0.73
PNKD-203ENST00000273077 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
PNKD-203ENST00000273077 FKBP8Q14318 412 aa19.6■□□□□ 0.73
PNKD-203ENST00000273077 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
PNKD-203ENST00000273077 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
PNKD-203ENST00000273077 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
PNKD-203ENST00000273077 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
PNKD-203ENST00000273077 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
PNKD-203ENST00000273077 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
PNKD-203ENST00000273077 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
PNKD-203ENST00000273077 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
PNKD-203ENST00000273077 NUP153P49790 1475 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms