RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 DNMBPQ6XZF7 1577 aa35.19■■■■□ 3.22
SH3GL1-201ENST00000269886 NESP48681 1621 aa35.17■■■■□ 3.22
SH3GL1-201ENST00000269886 DNAJC5BQ9UF47 199 aa35.15■■■■□ 3.22
SH3GL1-201ENST00000269886 POLA1P09884 1462 aaPredicted RBP35.15■■■■□ 3.22
SH3GL1-201ENST00000269886 TOPBP1Q92547 1522 aa35.15■■■■□ 3.22
SH3GL1-201ENST00000269886 RAB3GAP2Q9H2M9 1393 aa35.14■■■■□ 3.22
SH3GL1-201ENST00000269886 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
SH3GL1-201ENST00000269886 ABCA10Q8WWZ4 1543 aa35.13■■■■□ 3.21
SH3GL1-201ENST00000269886 PHLDB1Q86UU1 1377 aa35.13■■■■□ 3.21
SH3GL1-201ENST00000269886 ATP1B4Q9UN42 357 aaPredicted RBP35.1■■■■□ 3.21
SH3GL1-201ENST00000269886 PCF11O94913 1555 aaKnown RBP35.1■■■■□ 3.21
SH3GL1-201ENST00000269886 FHOD3Q2V2M9 1422 aa35.06■■■■□ 3.2
SH3GL1-201ENST00000269886 LAMC3Q9Y6N6 1575 aa35.05■■■■□ 3.2
SH3GL1-201ENST00000269886 CFAP43Q8NDM7 1665 aa35.02■■■■□ 3.2
SH3GL1-201ENST00000269886 FAM50AQ14320 339 aaKnown RBP35.02■■■■□ 3.2
SH3GL1-201ENST00000269886 MAPKBP1O60336 1514 aa34.99■■■■□ 3.19
SH3GL1-201ENST00000269886 SETD5Q9C0A6 1442 aa34.99■■■■□ 3.19
SH3GL1-201ENST00000269886 CUL7Q14999 1698 aa34.93■■■■□ 3.18
SH3GL1-201ENST00000269886 EFCAB5A4FU69 1503 aa34.91■■■■□ 3.18
SH3GL1-201ENST00000269886 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
SH3GL1-201ENST00000269886 URB2Q14146 1524 aaKnown RBP34.88■■■■□ 3.17
SH3GL1-201ENST00000269886 CASKIN1Q8WXD9 1431 aa34.87■■■■□ 3.17
SH3GL1-201ENST00000269886 CTTNBP2Q8WZ74 1663 aa34.86■■■■□ 3.17
SH3GL1-201ENST00000269886 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.164e-7■■■■■ 27.3
SH3GL1-201ENST00000269886 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
SH3GL1-201ENST00000269886 WDR97A6NE52 1622 aa34.79■■■■□ 3.16
SH3GL1-201ENST00000269886 PDS5BQ9NTI5 1447 aa34.78■■■■□ 3.16
SH3GL1-201ENST00000269886 SIN3AQ96ST3 1273 aa34.78■■■■□ 3.16
SH3GL1-201ENST00000269886 FMN1Q68DA7 1419 aa34.74■■■■□ 3.15
SH3GL1-201ENST00000269886 SNAPC4Q5SXM2 1469 aa34.7■■■■□ 3.15
SH3GL1-201ENST00000269886 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
SH3GL1-201ENST00000269886 GAPVD1Q14C86 1478 aa34.67■■■■□ 3.14
SH3GL1-201ENST00000269886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.66■■■■□ 3.146e-7■□□□□ 9.5
SH3GL1-201ENST00000269886 KIF21AQ7Z4S6 1674 aa34.65■■■■□ 3.14
SH3GL1-201ENST00000269886 FGD6Q6ZV73 1430 aa34.63■■■■□ 3.13
SH3GL1-201ENST00000269886 MTUS2Q5JR59 1369 aa34.61■■■■□ 3.13
SH3GL1-201ENST00000269886 SAMD9Q5K651 1589 aa34.6■■■■□ 3.13
SH3GL1-201ENST00000269886 LRRIQ1Q96JM4 1722 aa34.54■■■■□ 3.12
SH3GL1-201ENST00000269886 GRIN2BQ13224 1484 aa34.5■■■■□ 3.11
SH3GL1-201ENST00000269886 PTPRKQ15262 1439 aa34.49■■■■□ 3.11
SH3GL1-201ENST00000269886 TIMELESSQ9UNS1 1208 aa34.48■■■■□ 3.11
SH3GL1-201ENST00000269886 KCNH8Q96L42 1107 aa34.47■■■■□ 3.11
SH3GL1-201ENST00000269886 NCOA2Q15596 1464 aa34.46■■■■□ 3.11
SH3GL1-201ENST00000269886 DDX10Q13206 875 aaKnown RBP34.43■■■■□ 3.1
SH3GL1-201ENST00000269886 PPP1R15AO75807 674 aaPredicted RBP34.43■■■■□ 3.1
SH3GL1-201ENST00000269886 CCDC18Q5T9S5 1454 aa34.43■■■■□ 3.1
SH3GL1-201ENST00000269886 TARBP1Q13395 1621 aaKnown RBP34.42■■■■□ 3.1
SH3GL1-201ENST00000269886 MYOM3Q5VTT5 1437 aa34.4■■■■□ 3.1
SH3GL1-201ENST00000269886 HFM1A2PYH4 1435 aa34.39■■■■□ 3.1
SH3GL1-201ENST00000269886 HIRIP3Q9BW71 556 aaPredicted RBP34.38■■■■□ 3.09
SH3GL1-201ENST00000269886 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
SH3GL1-201ENST00000269886 PTPN23Q9H3S7 1636 aa34.35■■■■□ 3.09
SH3GL1-201ENST00000269886 SUPT6HQ7KZ85 1726 aaKnown RBP34.34■■■■□ 3.09
SH3GL1-201ENST00000269886 EHBP1L1Q8N3D4 1523 aa34.33■■■■□ 3.09
SH3GL1-201ENST00000269886 MRC2Q9UBG0 1479 aa34.33■■■■□ 3.09
SH3GL1-201ENST00000269886 UACAQ9BZF9 1416 aa34.32■■■■□ 3.08
SH3GL1-201ENST00000269886 NAIPQ13075 1403 aa34.31■■■■□ 3.08
SH3GL1-201ENST00000269886 MAGI3Q5TCQ9 1506 aa34.3■■■■□ 3.08
SH3GL1-201ENST00000269886 SUPT16HQ9Y5B9 1047 aaKnown RBP34.29■■■■□ 3.08
SH3GL1-201ENST00000269886 TONSLQ96HA7 1378 aa34.27■■■■□ 3.08
SH3GL1-201ENST00000269886 UGGT2Q9NYU1 1516 aa34.26■■■■□ 3.08
SH3GL1-201ENST00000269886 PBRM1Q86U86 1689 aa34.24■■■■□ 3.07
SH3GL1-201ENST00000269886 ARHGEF11O15085 1522 aa34.22■■■■□ 3.07
SH3GL1-201ENST00000269886 IQGAP2Q13576 1575 aa34.18■■■■□ 3.06
SH3GL1-201ENST00000269886 RRP7BPQ9NSQ0 103 aa34.16■■■■□ 3.06
SH3GL1-201ENST00000269886 CHIC2Q9UKJ5 165 aa34.15■■■■□ 3.06
SH3GL1-201ENST00000269886 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
SH3GL1-201ENST00000269886 ADAMTS12P58397 1594 aa34.14■■■■□ 3.06
SH3GL1-201ENST00000269886 WDR62O43379 1518 aa34.13■■■■□ 3.05
SH3GL1-201ENST00000269886 ARID3CA6NKF2 412 aa34.12■■■■□ 3.05
SH3GL1-201ENST00000269886 EPRSP07814 1512 aaKnown RBP34.12■■■■□ 3.05
SH3GL1-201ENST00000269886 ERCC6Q03468 1493 aa34.1■■■■□ 3.05
SH3GL1-201ENST00000269886 CDK13Q14004 1512 aaKnown RBP34.09■■■■□ 3.05
SH3GL1-201ENST00000269886 TCOF1Q13428 1488 aaKnown RBP34.08■■■■□ 3.05
SH3GL1-201ENST00000269886 ANP32CO43423 234 aa34.01■■■■□ 3.04
SH3GL1-201ENST00000269886 KDM5BQ9UGL1 1544 aa34.01■■■■□ 3.03
SH3GL1-201ENST00000269886 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
SH3GL1-201ENST00000269886 TRIM52Q96A61 297 aa33.99■■■■□ 3.03
SH3GL1-201ENST00000269886 GCC2Q8IWJ2 1684 aa33.97■■■■□ 3.03
SH3GL1-201ENST00000269886 DENND4BO75064 1496 aaPredicted RBP33.97■■■■□ 3.03
SH3GL1-201ENST00000269886 KDM6BO15054 1643 aa33.97■■■■□ 3.03
SH3GL1-201ENST00000269886 CCER2I3L3R5 266 aa33.96■■■■□ 3.03
SH3GL1-201ENST00000269886 IFT140Q96RY7 1462 aa33.95■■■■□ 3.03
SH3GL1-201ENST00000269886 MIA2Q96PC5 1412 aa33.94■■■■□ 3.02
SH3GL1-201ENST00000269886 AKNAQ7Z591 1439 aa33.91■■■■□ 3.02
SH3GL1-201ENST00000269886 MPHOSPH9Q99550 1183 aa33.85■■■■□ 3.01
SH3GL1-201ENST00000269886 DISP1Q96F81 1524 aa33.84■■■■□ 3.01
SH3GL1-201ENST00000269886 KIAA0586Q9BVV6 1533 aa33.83■■■■□ 3.01
SH3GL1-201ENST00000269886 FOXD1Q16676 465 aa33.81■■■■□ 3
SH3GL1-201ENST00000269886 KIAA0556O60303 1618 aa33.81■■■■□ 3
SH3GL1-201ENST00000269886 NUP153P49790 1475 aaKnown RBP33.77■■■■□ 3
SH3GL1-201ENST00000269886 ZNF644Q9H582 1327 aaPredicted RBP33.77■■■■□ 3
SH3GL1-201ENST00000269886 HSPA5P11021 654 aaKnown RBP33.77■■■■□ 3
SH3GL1-201ENST00000269886 BCANQ96GW7 911 aa33.76■■■■□ 3
SH3GL1-201ENST00000269886 FKBP8Q14318 412 aa33.76■■■□□ 2.99
SH3GL1-201ENST00000269886 DAPK1P53355 1430 aa33.75■■■□□ 2.99
SH3GL1-201ENST00000269886 GRIN2AQ12879 1464 aa33.73■■■□□ 2.99
SH3GL1-201ENST00000269886 WASHC2AQ641Q2 1341 aa33.72■■■□□ 2.99
SH3GL1-201ENST00000269886 L3MBTL2Q969R5 705 aa33.72■■■□□ 2.99
SH3GL1-201ENST00000269886 ABCC5O15440 1437 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms