RNA–Protein interactions for RNA: ENST00000269829.5

ZNF544-201, Transcript of zinc finger protein 544, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF544, Length 3,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-201ENST00000269829 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.396e-7■■■■■ 28.4
ZNF544-201ENST00000269829 PBRM1Q86U86 1689 aa12.6□□□□□ -0.39
ZNF544-201ENST00000269829 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
ZNF544-201ENST00000269829 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
ZNF544-201ENST00000269829 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.39
ZNF544-201ENST00000269829 EIF4G3O43432 1585 aaKnown RBP12.58□□□□□ -0.4
ZNF544-201ENST00000269829 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
ZNF544-201ENST00000269829 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
ZNF544-201ENST00000269829 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
ZNF544-201ENST00000269829 CUL7Q14999 1698 aa12.52□□□□□ -0.4
ZNF544-201ENST00000269829 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.4
ZNF544-201ENST00000269829 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
ZNF544-201ENST00000269829 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
ZNF544-201ENST00000269829 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
ZNF544-201ENST00000269829 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
ZNF544-201ENST00000269829 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.41
ZNF544-201ENST00000269829 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
ZNF544-201ENST00000269829 GRIN2BQ13224 1484 aa12.44□□□□□ -0.42
ZNF544-201ENST00000269829 CHD1O14646 1710 aa12.4□□□□□ -0.42
ZNF544-201ENST00000269829 FHAD1B1AJZ9 1412 aa12.39□□□□□ -0.43
ZNF544-201ENST00000269829 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
ZNF544-201ENST00000269829 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
ZNF544-201ENST00000269829 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
ZNF544-201ENST00000269829 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
ZNF544-201ENST00000269829 MTUS2Q5JR59 1369 aa12.35□□□□□ -0.43
ZNF544-201ENST00000269829 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
ZNF544-201ENST00000269829 PCF11O94913 1555 aaKnown RBP12.32□□□□□ -0.44
ZNF544-201ENST00000269829 CCNB3Q8WWL7 1395 aa12.31□□□□□ -0.44
ZNF544-201ENST00000269829 NUP160Q12769 1436 aa12.31□□□□□ -0.44
ZNF544-201ENST00000269829 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
ZNF544-201ENST00000269829 PHLDB1Q86UU1 1377 aa12.28□□□□□ -0.44
ZNF544-201ENST00000269829 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
ZNF544-201ENST00000269829 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
ZNF544-201ENST00000269829 GRIN2AQ12879 1464 aa12.27□□□□□ -0.44
ZNF544-201ENST00000269829 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
ZNF544-201ENST00000269829 TIAM1Q13009 1591 aa12.27□□□□□ -0.44
ZNF544-201ENST00000269829 CASKIN1Q8WXD9 1431 aa12.26□□□□□ -0.45
ZNF544-201ENST00000269829 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
ZNF544-201ENST00000269829 PHF23Q9BUL5 403 aaPredicted RBP12.25□□□□□ -0.45
ZNF544-201ENST00000269829 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
ZNF544-201ENST00000269829 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
ZNF544-201ENST00000269829 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
ZNF544-201ENST00000269829 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
ZNF544-201ENST00000269829 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.45
ZNF544-201ENST00000269829 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
ZNF544-201ENST00000269829 RRBP1Q9P2E9 1410 aaKnown RBP12.18□□□□□ -0.46
ZNF544-201ENST00000269829 NEUROD1Q13562 356 aa12.18□□□□□ -0.46
ZNF544-201ENST00000269829 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
ZNF544-201ENST00000269829 RRP7BPQ9NSQ0 103 aa12.17□□□□□ -0.46
ZNF544-201ENST00000269829 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
ZNF544-201ENST00000269829 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
ZNF544-201ENST00000269829 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
ZNF544-201ENST00000269829 RAB3GAP2Q9H2M9 1393 aa12.14□□□□□ -0.47
ZNF544-201ENST00000269829 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
ZNF544-201ENST00000269829 NCOA2Q15596 1464 aa12.14□□□□□ -0.47
ZNF544-201ENST00000269829 DISP1Q96F81 1524 aa12.13□□□□□ -0.47
ZNF544-201ENST00000269829 TRIM52Q96A61 297 aa12.13□□□□□ -0.47
ZNF544-201ENST00000269829 EPRSP07814 1512 aaKnown RBP12.12□□□□□ -0.47
ZNF544-201ENST00000269829 PRG4Q92954 1404 aaPredicted RBP12.12□□□□□ -0.47
ZNF544-201ENST00000269829 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
ZNF544-201ENST00000269829 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
ZNF544-201ENST00000269829 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
ZNF544-201ENST00000269829 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
ZNF544-201ENST00000269829 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
ZNF544-201ENST00000269829 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
ZNF544-201ENST00000269829 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
ZNF544-201ENST00000269829 KIAA0556O60303 1618 aa12.1□□□□□ -0.47
ZNF544-201ENST00000269829 PTPRGP23470 1445 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 RIMBP3CA6NJZ7 1639 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 RIMBP3BA6NNM3 1639 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 RIMBP3Q9UFD9 1639 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 SIN3AQ96ST3 1273 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-201ENST00000269829 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
ZNF544-201ENST00000269829 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
ZNF544-201ENST00000269829 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
ZNF544-201ENST00000269829 MAGI3Q5TCQ9 1506 aa12.07□□□□□ -0.48
ZNF544-201ENST00000269829 NUP153P49790 1475 aaKnown RBP12.06□□□□□ -0.48
ZNF544-201ENST00000269829 EHBP1L1Q8N3D4 1523 aa12.05□□□□□ -0.48
ZNF544-201ENST00000269829 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
ZNF544-201ENST00000269829 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
ZNF544-201ENST00000269829 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
ZNF544-201ENST00000269829 SUPT6HQ7KZ85 1726 aaKnown RBP12.03□□□□□ -0.48
ZNF544-201ENST00000269829 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
ZNF544-201ENST00000269829 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
ZNF544-201ENST00000269829 UHRF1BP1LA0JNW5 1464 aa12.02□□□□□ -0.49
ZNF544-201ENST00000269829 RAPGEF6Q8TEU7 1601 aa12.02□□□□□ -0.49
ZNF544-201ENST00000269829 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
ZNF544-201ENST00000269829 FOXD1Q16676 465 aa11.99□□□□□ -0.49
ZNF544-201ENST00000269829 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
ZNF544-201ENST00000269829 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
ZNF544-201ENST00000269829 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
ZNF544-201ENST00000269829 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
ZNF544-201ENST00000269829 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
ZNF544-201ENST00000269829 PTPN23Q9H3S7 1636 aa11.96□□□□□ -0.49
ZNF544-201ENST00000269829 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.49
ZNF544-201ENST00000269829 ABCA8O94911 1581 aa11.96□□□□□ -0.5
ZNF544-201ENST00000269829 ATP10BO94823 1461 aa11.95□□□□□ -0.5
ZNF544-201ENST00000269829 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms