RNA–Protein interactions for RNA: ENST00000265634.3

NPTX2-201, Transcript of neuronal pentraxin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX2, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2-201ENST00000265634 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
NPTX2-201ENST00000265634 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
NPTX2-201ENST00000265634 FAM50AQ14320 339 aaKnown RBP27.22■■□□□ 1.95
NPTX2-201ENST00000265634 FHOD3Q2V2M9 1422 aa27.22■■□□□ 1.95
NPTX2-201ENST00000265634 TIAM1Q13009 1591 aa27.21■■□□□ 1.95
NPTX2-201ENST00000265634 PHLDB1Q86UU1 1377 aa27.17■■□□□ 1.94
NPTX2-201ENST00000265634 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
NPTX2-201ENST00000265634 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
NPTX2-201ENST00000265634 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
NPTX2-201ENST00000265634 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.93
NPTX2-201ENST00000265634 RAB3GAP2Q9H2M9 1393 aa27.13■■□□□ 1.93
NPTX2-201ENST00000265634 PCF11O94913 1555 aaKnown RBP27.12■■□□□ 1.93
NPTX2-201ENST00000265634 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
NPTX2-201ENST00000265634 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
NPTX2-201ENST00000265634 MYT1Q01538 1121 aa27.04■■□□□ 1.92
NPTX2-201ENST00000265634 MAP3K1Q13233 1512 aa27.03■■□□□ 1.92
NPTX2-201ENST00000265634 SETD5Q9C0A6 1442 aa26.97■■□□□ 1.91
NPTX2-201ENST00000265634 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
NPTX2-201ENST00000265634 SIN3AQ96ST3 1273 aa26.95■■□□□ 1.9
NPTX2-201ENST00000265634 CUL7Q14999 1698 aa26.94■■□□□ 1.9
NPTX2-201ENST00000265634 CFAP43Q8NDM7 1665 aa26.93■■□□□ 1.9
NPTX2-201ENST00000265634 CASKIN1Q8WXD9 1431 aa26.91■■□□□ 1.9
NPTX2-201ENST00000265634 MAPKBP1O60336 1514 aa26.91■■□□□ 1.9
NPTX2-201ENST00000265634 FYCO1Q9BQS8 1478 aa26.91■■□□□ 1.9
NPTX2-201ENST00000265634 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
NPTX2-201ENST00000265634 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
NPTX2-201ENST00000265634 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.9
NPTX2-201ENST00000265634 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
NPTX2-201ENST00000265634 MTUS2Q5JR59 1369 aa26.84■■□□□ 1.89
NPTX2-201ENST00000265634 FMN1Q68DA7 1419 aa26.83■■□□□ 1.89
NPTX2-201ENST00000265634 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
NPTX2-201ENST00000265634 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
NPTX2-201ENST00000265634 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
NPTX2-201ENST00000265634 SNAPC4Q5SXM2 1469 aa26.79■■□□□ 1.88
NPTX2-201ENST00000265634 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
NPTX2-201ENST00000265634 ARID3CA6NKF2 412 aa26.77■■□□□ 1.88
NPTX2-201ENST00000265634 FGD6Q6ZV73 1430 aa26.74■■□□□ 1.87
NPTX2-201ENST00000265634 HIRIP3Q9BW71 556 aaPredicted RBP26.72■■□□□ 1.87
NPTX2-201ENST00000265634 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
NPTX2-201ENST00000265634 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
NPTX2-201ENST00000265634 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
NPTX2-201ENST00000265634 KCNH8Q96L42 1107 aa26.64■■□□□ 1.85
NPTX2-201ENST00000265634 NCOA2Q15596 1464 aa26.64■■□□□ 1.85
NPTX2-201ENST00000265634 LRRIQ1Q96JM4 1722 aa26.63■■□□□ 1.85
NPTX2-201ENST00000265634 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
NPTX2-201ENST00000265634 DDX10Q13206 875 aaKnown RBP26.62■■□□□ 1.85
NPTX2-201ENST00000265634 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
NPTX2-201ENST00000265634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.59■■□□□ 1.85
NPTX2-201ENST00000265634 CCDC18Q5T9S5 1454 aa26.57■■□□□ 1.84
NPTX2-201ENST00000265634 MYOM3Q5VTT5 1437 aa26.57■■□□□ 1.84
NPTX2-201ENST00000265634 RRP7BPQ9NSQ0 103 aa26.56■■□□□ 1.84
NPTX2-201ENST00000265634 MAGI3Q5TCQ9 1506 aa26.53■■□□□ 1.84
NPTX2-201ENST00000265634 PPP1R15AO75807 674 aaPredicted RBP26.52■■□□□ 1.84
NPTX2-201ENST00000265634 HFM1A2PYH4 1435 aa26.49■■□□□ 1.83
NPTX2-201ENST00000265634 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
NPTX2-201ENST00000265634 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
NPTX2-201ENST00000265634 TONSLQ96HA7 1378 aa26.49■■□□□ 1.83
NPTX2-201ENST00000265634 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
NPTX2-201ENST00000265634 EHBP1L1Q8N3D4 1523 aa26.47■■□□□ 1.83
NPTX2-201ENST00000265634 NAIPQ13075 1403 aa26.47■■□□□ 1.83
NPTX2-201ENST00000265634 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
NPTX2-201ENST00000265634 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
NPTX2-201ENST00000265634 PTPN23Q9H3S7 1636 aa26.45■■□□□ 1.83
NPTX2-201ENST00000265634 IQGAP2Q13576 1575 aa26.45■■□□□ 1.83
NPTX2-201ENST00000265634 UACAQ9BZF9 1416 aa26.43■■□□□ 1.82
NPTX2-201ENST00000265634 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
NPTX2-201ENST00000265634 TRIM52Q96A61 297 aa26.42■■□□□ 1.82
NPTX2-201ENST00000265634 TIMELESSQ9UNS1 1208 aa26.42■■□□□ 1.82
NPTX2-201ENST00000265634 UGGT2Q9NYU1 1516 aa26.42■■□□□ 1.82
NPTX2-201ENST00000265634 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
NPTX2-201ENST00000265634 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
NPTX2-201ENST00000265634 HECW1Q76N89 1606 aa26.36■■□□□ 1.81
NPTX2-201ENST00000265634 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
NPTX2-201ENST00000265634 FBLN2P98095 1184 aa26.31■■□□□ 1.8
NPTX2-201ENST00000265634 FOXD1Q16676 465 aa26.31■■□□□ 1.8
NPTX2-201ENST00000265634 IFT140Q96RY7 1462 aa26.29■■□□□ 1.8
NPTX2-201ENST00000265634 SUPT16HQ9Y5B9 1047 aaKnown RBP26.29■■□□□ 1.8
NPTX2-201ENST00000265634 WDR62O43379 1518 aa26.28■■□□□ 1.8
NPTX2-201ENST00000265634 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
NPTX2-201ENST00000265634 KDM6BO15054 1643 aa26.25■■□□□ 1.79
NPTX2-201ENST00000265634 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
NPTX2-201ENST00000265634 ERCC6Q03468 1493 aa26.22■■□□□ 1.79
NPTX2-201ENST00000265634 ANP32CO43423 234 aa26.22■■□□□ 1.79
NPTX2-201ENST00000265634 DISP1Q96F81 1524 aa26.21■■□□□ 1.79
NPTX2-201ENST00000265634 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
NPTX2-201ENST00000265634 KIAA0586Q9BVV6 1533 aa26.19■■□□□ 1.78
NPTX2-201ENST00000265634 MPHOSPH9Q99550 1183 aa26.19■■□□□ 1.78
NPTX2-201ENST00000265634 DENND4BO75064 1496 aaPredicted RBP26.18■■□□□ 1.78
NPTX2-201ENST00000265634 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
NPTX2-201ENST00000265634 KIAA0556O60303 1618 aa26.16■■□□□ 1.78
NPTX2-201ENST00000265634 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
NPTX2-201ENST00000265634 MIA2Q96PC5 1412 aa26.16■■□□□ 1.78
NPTX2-201ENST00000265634 NUP153P49790 1475 aaKnown RBP26.15■■□□□ 1.78
NPTX2-201ENST00000265634 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
NPTX2-201ENST00000265634 KDM5BQ9UGL1 1544 aa26.12■■□□□ 1.77
NPTX2-201ENST00000265634 BCANQ96GW7 911 aa26.11■■□□□ 1.77
NPTX2-201ENST00000265634 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
NPTX2-201ENST00000265634 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
NPTX2-201ENST00000265634 GCC2Q8IWJ2 1684 aa26.1■■□□□ 1.77
NPTX2-201ENST00000265634 CDK11AQ9UQ88 783 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms