RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
COL6A5-201ENST00000265379 SOGA1O94964 1423 aa11.43□□□□□ -0.58
COL6A5-201ENST00000265379 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
COL6A5-201ENST00000265379 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
COL6A5-201ENST00000265379 TONSLQ96HA7 1378 aa11.41□□□□□ -0.58
COL6A5-201ENST00000265379 CHMP7Q8WUX9 453 aaPredicted RBP11.4□□□□□ -0.58
COL6A5-201ENST00000265379 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
COL6A5-201ENST00000265379 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
COL6A5-201ENST00000265379 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
COL6A5-201ENST00000265379 FGD5Q6ZNL6 1462 aa11.35□□□□□ -0.59
COL6A5-201ENST00000265379 FYCO1Q9BQS8 1478 aa11.34□□□□□ -0.59
COL6A5-201ENST00000265379 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
COL6A5-201ENST00000265379 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.59
COL6A5-201ENST00000265379 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
COL6A5-201ENST00000265379 ANP32CO43423 234 aa11.33□□□□□ -0.6
COL6A5-201ENST00000265379 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
COL6A5-201ENST00000265379 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
COL6A5-201ENST00000265379 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
COL6A5-201ENST00000265379 ITGAEP38570 1179 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 SYNJ1O43426 1573 aa11.32□□□□□ -0.6
COL6A5-201ENST00000265379 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
COL6A5-201ENST00000265379 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
COL6A5-201ENST00000265379 GAPVD1Q14C86 1478 aa11.31□□□□□ -0.6
COL6A5-201ENST00000265379 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
COL6A5-201ENST00000265379 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
COL6A5-201ENST00000265379 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
COL6A5-201ENST00000265379 FBLN2P98095 1184 aa11.27□□□□□ -0.61
COL6A5-201ENST00000265379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.27□□□□□ -0.61
COL6A5-201ENST00000265379 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
COL6A5-201ENST00000265379 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
COL6A5-201ENST00000265379 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
COL6A5-201ENST00000265379 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
COL6A5-201ENST00000265379 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
COL6A5-201ENST00000265379 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
COL6A5-201ENST00000265379 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
COL6A5-201ENST00000265379 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
COL6A5-201ENST00000265379 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
COL6A5-201ENST00000265379 IGF1RP08069 1367 aa11.19□□□□□ -0.62
COL6A5-201ENST00000265379 KANK1Q14678 1352 aa11.18□□□□□ -0.62
COL6A5-201ENST00000265379 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
COL6A5-201ENST00000265379 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
COL6A5-201ENST00000265379 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
COL6A5-201ENST00000265379 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
COL6A5-201ENST00000265379 ANKRD30AQ9BXX3 1397 aa11.17□□□□□ -0.62
COL6A5-201ENST00000265379 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
COL6A5-201ENST00000265379 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
COL6A5-201ENST00000265379 MIA2Q96PC5 1412 aa11.16□□□□□ -0.62
COL6A5-201ENST00000265379 TIAM1Q13009 1591 aa11.14□□□□□ -0.63
COL6A5-201ENST00000265379 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
COL6A5-201ENST00000265379 RRBP1Q9P2E9 1410 aaKnown RBP11.13□□□□□ -0.63
COL6A5-201ENST00000265379 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
COL6A5-201ENST00000265379 IQGAP2Q13576 1575 aa11.13□□□□□ -0.63
COL6A5-201ENST00000265379 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
COL6A5-201ENST00000265379 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
COL6A5-201ENST00000265379 NEFMP07197 916 aa11.12□□□□□ -0.63
COL6A5-201ENST00000265379 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
COL6A5-201ENST00000265379 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL6A5-201ENST00000265379 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
COL6A5-201ENST00000265379 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
COL6A5-201ENST00000265379 ANP32BQ92688 251 aaKnown RBP11.1□□□□□ -0.63
COL6A5-201ENST00000265379 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
COL6A5-201ENST00000265379 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
COL6A5-201ENST00000265379 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
COL6A5-201ENST00000265379 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
COL6A5-201ENST00000265379 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
COL6A5-201ENST00000265379 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
COL6A5-201ENST00000265379 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
COL6A5-201ENST00000265379 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
COL6A5-201ENST00000265379 EIF3AQ14152 1382 aaKnown RBP11.06□□□□□ -0.64
COL6A5-201ENST00000265379 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
COL6A5-201ENST00000265379 ZNF777Q9ULD5 760 aaPredicted RBP11.06□□□□□ -0.64
COL6A5-201ENST00000265379 FHOD3Q2V2M9 1422 aa11.05□□□□□ -0.64
COL6A5-201ENST00000265379 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
COL6A5-201ENST00000265379 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
COL6A5-201ENST00000265379 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.64
COL6A5-201ENST00000265379 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
COL6A5-201ENST00000265379 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
COL6A5-201ENST00000265379 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
COL6A5-201ENST00000265379 SCAPERQ9BY12 1400 aa11.01□□□□□ -0.65
COL6A5-201ENST00000265379 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
COL6A5-201ENST00000265379 PTPRGP23470 1445 aa11□□□□□ -0.65
COL6A5-201ENST00000265379 ROCK1Q13464 1354 aa11□□□□□ -0.65
COL6A5-201ENST00000265379 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
COL6A5-201ENST00000265379 HDGFP51858 240 aaKnown RBP10.99□□□□□ -0.65
COL6A5-201ENST00000265379 KTN1Q86UP2 1357 aaKnown RBP10.99□□□□□ -0.65
COL6A5-201ENST00000265379 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
COL6A5-201ENST00000265379 HFM1A2PYH4 1435 aa10.98□□□□□ -0.65
COL6A5-201ENST00000265379 NCOA2Q15596 1464 aa10.98□□□□□ -0.65
COL6A5-201ENST00000265379 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
COL6A5-201ENST00000265379 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
COL6A5-201ENST00000265379 PHLDB1Q86UU1 1377 aa10.97□□□□□ -0.65
COL6A5-201ENST00000265379 CDK11BP21127 795 aaKnown RBP10.97□□□□□ -0.65
COL6A5-201ENST00000265379 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
COL6A5-201ENST00000265379 WDR62O43379 1518 aa10.96□□□□□ -0.65
COL6A5-201ENST00000265379 TROQ12816 1431 aaPredicted RBP10.96□□□□□ -0.65
COL6A5-201ENST00000265379 NCLP19338 710 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms